Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120399X.Seq
         (530 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF592538-1|ABQ95984.1|  582|Tribolium castaneum beta-N-acetylglu...    25   0.31 
EF592539-1|ABQ95985.1|  630|Tribolium castaneum beta-N-acetylglu...    24   0.73 
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    23   1.7  
DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          22   3.9  
AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory recept...    22   3.9  
EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate 1-deca...    21   5.1  
DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    21   5.1  
AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone recepto...    21   8.9  
AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory recept...    21   8.9  
AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory recept...    21   8.9  

>EF592538-1|ABQ95984.1|  582|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG3 protein.
          Length = 582

 Score = 25.4 bits (53), Expect = 0.31
 Identities = 10/29 (34%), Positives = 18/29 (62%)
 Frame = +1

Query: 109 TCSVMSSQSDLWPRTSPASLKYVNCERAI 195
           TC+++ S+  +WP+  P  +K  N E +I
Sbjct: 67  TCNMLCSEPAIWPK--PVHIKLTNRESSI 93


>EF592539-1|ABQ95985.1|  630|Tribolium castaneum
           beta-N-acetylglucosaminidase FDL protein.
          Length = 630

 Score = 24.2 bits (50), Expect = 0.73
 Identities = 9/21 (42%), Positives = 14/21 (66%), Gaps = 1/21 (4%)
 Frame = +1

Query: 109 TCSVMSSQSDLWPR-TSPASL 168
           TCS++   + LWP+ T P +L
Sbjct: 81  TCSMLCGSTQLWPQPTGPVTL 101



 Score = 21.0 bits (42), Expect = 6.8
 Identities = 9/31 (29%), Positives = 16/31 (51%)
 Frame = +3

Query: 390 LLEEVIPQVLCTGKYAPAVEMDTNDVIAKID 482
           L+ + +PQ+   G Y P +     DV A ++
Sbjct: 284 LVSQRVPQLAKNGAYGPDMIYTPEDVKALVE 314


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
            candidate 46 protein.
          Length = 1451

 Score = 23.0 bits (47), Expect = 1.7
 Identities = 8/16 (50%), Positives = 13/16 (81%)
 Frame = -3

Query: 261  EHVLDLVGMLKRRFVL 214
            +H ++LV M+K RFV+
Sbjct: 1256 QHCVELVSMIKARFVV 1271


>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 21.8 bits (44), Expect = 3.9
 Identities = 7/15 (46%), Positives = 9/15 (60%)
 Frame = +2

Query: 308 HSAHYQIWRDSTDNE 352
           H   Y IW D +DN+
Sbjct: 30  HQQIYGIWADDSDND 44


>AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory
          receptor candidate 60 protein.
          Length = 364

 Score = 21.8 bits (44), Expect = 3.9
 Identities = 7/14 (50%), Positives = 12/14 (85%)
 Frame = +2

Query: 2  VESPRVVVNKFNLI 43
          V+ PR+VV+ FN++
Sbjct: 36 VQYPRIVVSTFNIV 49


>EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate
           1-decarboxylase protein.
          Length = 540

 Score = 21.4 bits (43), Expect = 5.1
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = -1

Query: 521 PNLRCHRQFLRQIVN 477
           PN R H +FLR  V+
Sbjct: 57  PNRRLHEEFLRSSVD 71


>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7
           protein.
          Length = 980

 Score = 21.4 bits (43), Expect = 5.1
 Identities = 9/29 (31%), Positives = 17/29 (58%)
 Frame = +1

Query: 142 WPRTSPASLKYVNCERAIRVHVDGKYKST 228
           +PR +     YVN  + +RV  +G+ K++
Sbjct: 641 YPRGADDRAAYVNLLKELRVAFEGEAKTS 669


>AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone receptor
           (isoform A) protein.
          Length = 549

 Score = 20.6 bits (41), Expect = 8.9
 Identities = 11/28 (39%), Positives = 13/28 (46%)
 Frame = -2

Query: 310 VCGCKYSGSPCFATLSGACAGFGRHAQT 227
           VCG + SG    A     C GF R + T
Sbjct: 190 VCGDRASGYHYNALTCEGCKGFFRRSIT 217


>AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory receptor
           candidate 56 protein.
          Length = 358

 Score = 20.6 bits (41), Expect = 8.9
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = -2

Query: 496 FCVRSSILAITSFVSISTA 440
           FCV+  +    +F+SI TA
Sbjct: 282 FCVQQLLRITVAFISIVTA 300


>AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory receptor
           candidate 21 protein.
          Length = 386

 Score = 20.6 bits (41), Expect = 8.9
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = -2

Query: 496 FCVRSSILAITSFVSISTA 440
           FCV+  +    +F+SI TA
Sbjct: 282 FCVQQLLRITVAFISIVTA 300


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 136,228
Number of Sequences: 336
Number of extensions: 3066
Number of successful extensions: 11
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12887571
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)