Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV120398X.Seq
(453 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_31411| Best HMM Match : No HMM Matches (HMM E-Value=.) 67 6e-12
SB_16545| Best HMM Match : Cullin (HMM E-Value=0) 51 5e-07
SB_28840| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.012
SB_19637| Best HMM Match : Cullin (HMM E-Value=0) 33 0.11
SB_54925| Best HMM Match : MFS_1 (HMM E-Value=4.7e-27) 31 0.34
SB_6903| Best HMM Match : Cullin (HMM E-Value=0) 31 0.59
SB_40869| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 0.78
SB_45940| Best HMM Match : Vicilin_N (HMM E-Value=5.1) 29 2.4
SB_24420| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 3.1
SB_18790| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 3.1
SB_10917| Best HMM Match : SPRY (HMM E-Value=1.4e-17) 28 4.2
SB_24485| Best HMM Match : zf-CCCH (HMM E-Value=3e-09) 27 5.5
SB_47437| Best HMM Match : GlcNAc_2-epim (HMM E-Value=2.1) 27 5.5
SB_38512| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 5.5
SB_26989| Best HMM Match : Chromo (HMM E-Value=5.5e-10) 27 5.5
SB_53727| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.3
SB_55359| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.6
SB_43550| Best HMM Match : Laminin_EGF (HMM E-Value=0) 27 9.6
>SB_31411| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 361
Score = 67.3 bits (157), Expect = 6e-12
Identities = 34/88 (38%), Positives = 51/88 (57%), Gaps = 1/88 (1%)
Frame = +3
Query: 3 LQRMFQDIGVSKDLNENFRKHMANSSEQPLHIDFSIQVLSSGSWP-FQQSTSFQLPTELE 179
L RMFQDI VS+DLN+ F++ + + + +I++L++G+W + LPTELE
Sbjct: 232 LARMFQDIKVSEDLNQEFKRTCRDKGD--IADSINIKILNAGAWSRASERIPVSLPTELE 289
Query: 180 RSVHRFTTFYSSQHSGRKLNWLYNMARG 263
+ FY HSGRKL W + M+ G
Sbjct: 290 DCIPEVEEFYRKNHSGRKLQWHHLMSNG 317
>SB_16545| Best HMM Match : Cullin (HMM E-Value=0)
Length = 471
Score = 50.8 bits (116), Expect = 5e-07
Identities = 28/68 (41%), Positives = 39/68 (57%), Gaps = 1/68 (1%)
Frame = +2
Query: 245 LQH-GKGELLTNCFKNRYTLEASTFQMAVLLQYNDNTSWTVRQLEQHTGIKGDFLIQVLQ 421
LQH GE+ N K Y L STFQMAV+L +ND +T +L T + L +++Q
Sbjct: 366 LQHLSNGEVKLNYCKRTYFLTVSTFQMAVMLLFNDKLQFTFSELSTLTQLLNKELTRIIQ 425
Query: 422 ILLNAKLL 445
L++ KLL
Sbjct: 426 SLVDVKLL 433
Score = 46.0 bits (104), Expect = 1e-05
Identities = 30/87 (34%), Positives = 46/87 (52%)
Frame = +3
Query: 3 LQRMFQDIGVSKDLNENFRKHMANSSEQPLHIDFSIQVLSSGSWPFQQSTSFQLPTELER 182
L RMF D+ +S DLN +F +A +++ + I+FS+ VL EL R
Sbjct: 303 LHRMFTDMSISSDLNSSFSDFLA-TAQVNMGINFSLLVLQ----------------ELIR 345
Query: 183 SVHRFTTFYSSQHSGRKLNWLYNMARG 263
V F FY+ + +GRKL WL +++ G
Sbjct: 346 PVQMFEQFYNGKFNGRKLAWLQHLSNG 372
>SB_28840| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 615
Score = 36.3 bits (80), Expect = 0.012
Identities = 16/35 (45%), Positives = 24/35 (68%)
Frame = +2
Query: 290 RYTLEASTFQMAVLLQYNDNTSWTVRQLEQHTGIK 394
R+ AST+QM VLL +N S+TV Q+++ T +K
Sbjct: 204 RHLGAASTYQMGVLLMFNTADSYTVEQIQEQTQLK 238
>SB_19637| Best HMM Match : Cullin (HMM E-Value=0)
Length = 685
Score = 33.1 bits (72), Expect = 0.11
Identities = 13/27 (48%), Positives = 20/27 (74%)
Frame = +3
Query: 3 LQRMFQDIGVSKDLNENFRKHMANSSE 83
L+ MF+D+ VS NE FR+H++NS +
Sbjct: 545 LEGMFKDMTVSHTTNEEFRQHLSNSQD 571
>SB_54925| Best HMM Match : MFS_1 (HMM E-Value=4.7e-27)
Length = 1373
Score = 31.5 bits (68), Expect = 0.34
Identities = 14/42 (33%), Positives = 20/42 (47%)
Frame = -3
Query: 199 VNRCTERSSSVGSWKDVDCWKGHEPDDSTWMLKSMCRGCSEL 74
V + +R G + + WKG+ P D TW +GC EL
Sbjct: 907 VEKILDRRVQRGKVEYLVRWKGYGPADDTWEPSKNLKGCKEL 948
>SB_6903| Best HMM Match : Cullin (HMM E-Value=0)
Length = 430
Score = 30.7 bits (66), Expect = 0.59
Identities = 11/38 (28%), Positives = 23/38 (60%)
Frame = +2
Query: 299 LEASTFQMAVLLQYNDNTSWTVRQLEQHTGIKGDFLIQ 412
L+ S FQ VLL +N+ +++ ++Q TG+ + ++
Sbjct: 227 LQVSLFQTLVLLMFNEGNEYSLEDIKQATGVGKSYSLE 264
Score = 28.3 bits (60), Expect = 3.1
Identities = 10/16 (62%), Positives = 12/16 (75%)
Frame = +3
Query: 195 FTTFYSSQHSGRKLNW 242
F FY ++HSGRKL W
Sbjct: 186 FKKFYLAKHSGRKLQW 201
>SB_40869| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 412
Score = 30.3 bits (65), Expect = 0.78
Identities = 17/51 (33%), Positives = 21/51 (41%)
Frame = +1
Query: 301 GGEHVPDGGAAAVQRQHLVDGPPAGAAHRHQRGLPHTGTSNIIERETVGVS 453
G H G A Q Q L G AH H +GL H T + T G++
Sbjct: 180 GLAHSHTKGLAYSQTQGLAHSHTKGLAHSHIKGLAHGHTKGLAHSHTKGLA 230
Score = 30.3 bits (65), Expect = 0.78
Identities = 16/51 (31%), Positives = 22/51 (43%)
Frame = +1
Query: 301 GGEHVPDGGAAAVQRQHLVDGPPAGAAHRHQRGLPHTGTSNIIERETVGVS 453
G H G A + L G G AH H +GL H+ T + T G++
Sbjct: 196 GLAHSHTKGLAHSHIKGLAHGHTKGLAHSHTKGLAHSHTKGLAHSHTKGLA 246
Score = 29.9 bits (64), Expect = 1.0
Identities = 16/51 (31%), Positives = 22/51 (43%)
Frame = +1
Query: 301 GGEHVPDGGAAAVQRQHLVDGPPAGAAHRHQRGLPHTGTSNIIERETVGVS 453
G H G A Q + L G AH H +GL H+ T + T G++
Sbjct: 68 GLAHSHTKGLAHSQIKGLTHSHTKGLAHSHTKGLAHSHTKGLAHSHTKGLA 118
Score = 29.9 bits (64), Expect = 1.0
Identities = 16/51 (31%), Positives = 22/51 (43%)
Frame = +1
Query: 301 GGEHVPDGGAAAVQRQHLVDGPPAGAAHRHQRGLPHTGTSNIIERETVGVS 453
G H G A Q + L G AH H +GL H+ T + T G++
Sbjct: 132 GLAHSHTKGLAHSQIKGLAHSHTKGLAHSHTKGLAHSHTKGLAHSHTKGLA 182
Score = 29.5 bits (63), Expect = 1.4
Identities = 14/48 (29%), Positives = 22/48 (45%)
Frame = +1
Query: 310 HVPDGGAAAVQRQHLVDGPPAGAAHRHQRGLPHTGTSNIIERETVGVS 453
H + G A + L G G AH H +GL H+ T + + G++
Sbjct: 23 HSHNKGLAYSHTKGLAHGHTNGLAHSHTKGLAHSRTKGLAHSQIKGLA 70
Score = 28.7 bits (61), Expect = 2.4
Identities = 15/51 (29%), Positives = 21/51 (41%)
Frame = +1
Query: 301 GGEHVPDGGAAAVQRQHLVDGPPAGAAHRHQRGLPHTGTSNIIERETVGVS 453
G H G A + L G AH H +GL H+ T + T G++
Sbjct: 84 GLTHSHTKGLAHSHTKGLAHSHTKGLAHSHTKGLAHSHTKGLAHSHTKGLA 134
Score = 28.7 bits (61), Expect = 2.4
Identities = 15/51 (29%), Positives = 21/51 (41%)
Frame = +1
Query: 301 GGEHVPDGGAAAVQRQHLVDGPPAGAAHRHQRGLPHTGTSNIIERETVGVS 453
G H G A + L G AH H +GL H+ T + T G++
Sbjct: 92 GLAHSHTKGLAHSHTKGLAHSHTKGLAHSHTKGLAHSHTKGLAHSHTKGLA 142
Score = 28.7 bits (61), Expect = 2.4
Identities = 15/51 (29%), Positives = 22/51 (43%)
Frame = +1
Query: 301 GGEHVPDGGAAAVQRQHLVDGPPAGAAHRHQRGLPHTGTSNIIERETVGVS 453
G H G A + L G AH H +GL H+ T + +T G++
Sbjct: 148 GLAHSHTKGLAHSHTKGLAHSHTKGLAHSHTKGLAHSHTKGLAYSQTQGLA 198
Score = 28.3 bits (60), Expect = 3.1
Identities = 15/51 (29%), Positives = 21/51 (41%)
Frame = +1
Query: 301 GGEHVPDGGAAAVQRQHLVDGPPAGAAHRHQRGLPHTGTSNIIERETVGVS 453
G H G A + L G AH H +GL H+ T + T G++
Sbjct: 124 GLAHSHTKGLAHSHTKGLAHSQIKGLAHSHTKGLAHSHTKGLAHSHTKGLA 174
Score = 28.3 bits (60), Expect = 3.1
Identities = 15/51 (29%), Positives = 21/51 (41%)
Frame = +1
Query: 301 GGEHVPDGGAAAVQRQHLVDGPPAGAAHRHQRGLPHTGTSNIIERETVGVS 453
G H G A + L G AH H +GL H+ T + T G++
Sbjct: 140 GLAHSQIKGLAHSHTKGLAHSHTKGLAHSHTKGLAHSHTKGLAHSHTKGLA 190
Score = 28.3 bits (60), Expect = 3.1
Identities = 15/51 (29%), Positives = 21/51 (41%)
Frame = +1
Query: 301 GGEHVPDGGAAAVQRQHLVDGPPAGAAHRHQRGLPHTGTSNIIERETVGVS 453
G H G A + L G AH H +GL H+ T + T G++
Sbjct: 220 GLAHSHTKGLAHSHTKGLAHSHTKGLAHSHTKGLAHSYTKGLAHSHTKGLA 270
Score = 27.5 bits (58), Expect = 5.5
Identities = 15/51 (29%), Positives = 21/51 (41%)
Frame = +1
Query: 301 GGEHVPDGGAAAVQRQHLVDGPPAGAAHRHQRGLPHTGTSNIIERETVGVS 453
G H G A + L G AH H +GL H+ T + T G++
Sbjct: 212 GLAHGHTKGLAHSHTKGLAHSHTKGLAHSHTKGLAHSHTKGLAHSYTKGLA 262
Score = 27.1 bits (57), Expect = 7.3
Identities = 14/51 (27%), Positives = 21/51 (41%)
Frame = +1
Query: 301 GGEHVPDGGAAAVQRQHLVDGPPAGAAHRHQRGLPHTGTSNIIERETVGVS 453
G H G A + L G AH H +GL H+ T + + G++
Sbjct: 100 GLAHSHTKGLAHSHTKGLAHSHTKGLAHSHTKGLAHSHTKGLAHSQIKGLA 150
Score = 26.6 bits (56), Expect = 9.6
Identities = 15/54 (27%), Positives = 22/54 (40%), Gaps = 1/54 (1%)
Frame = +1
Query: 295 HAGG-EHVPDGGAAAVQRQHLVDGPPAGAAHRHQRGLPHTGTSNIIERETVGVS 453
H G H G A + + L G AH H +GL H+ + T G++
Sbjct: 41 HTNGLAHSHTKGLAHSRTKGLAHSQIKGLAHSHTKGLAHSQIKGLTHSHTKGLA 94
>SB_45940| Best HMM Match : Vicilin_N (HMM E-Value=5.1)
Length = 454
Score = 28.7 bits (61), Expect = 2.4
Identities = 18/70 (25%), Positives = 25/70 (35%)
Frame = +3
Query: 42 LNENFRKHMANSSEQPLHIDFSIQVLSSGSWPFQQSTSFQLPTELERSVHRFTTFYSSQH 221
LN +R P + S+ WP QQ P E+ T Y+ +
Sbjct: 235 LNPYWRVQQGKGRSNPYRCVQQGKRRSNPYWPVQQGKGRLNPYWREKEGRTLTDVYNKEK 294
Query: 222 SGRKLNWLYN 251
GR L +YN
Sbjct: 295 EGRTLTGVYN 304
>SB_24420| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 608
Score = 28.3 bits (60), Expect = 3.1
Identities = 19/60 (31%), Positives = 30/60 (50%), Gaps = 1/60 (1%)
Frame = +2
Query: 221 LRAQAELALQHGKGELLTNCFKNRYTLEAS-TFQMAVLLQYNDNTSWTVRQLEQHTGIKG 397
LR A + H +G + + N + LEAS V +QYNDN W +++ + H + G
Sbjct: 410 LRQVAAINRLHTRGMFFWD-YGNAFLLEASRAVPDEVKVQYNDNMRW-IKEAQAHHLVVG 467
>SB_18790| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 819
Score = 28.3 bits (60), Expect = 3.1
Identities = 11/32 (34%), Positives = 16/32 (50%)
Frame = -3
Query: 151 VDCWKGHEPDDSTWMLKSMCRGCSELFAMCFL 56
V CW + D W L S SE+ ++CF+
Sbjct: 233 VICWTPYTVDAILWFLDSQVSKLSEVLSLCFV 264
>SB_10917| Best HMM Match : SPRY (HMM E-Value=1.4e-17)
Length = 635
Score = 27.9 bits (59), Expect = 4.2
Identities = 8/17 (47%), Positives = 10/17 (58%)
Frame = -2
Query: 389 CRCAAPAGGPSTRCCRC 339
C+C P P +RCC C
Sbjct: 317 CQCGRPLNRPFSRCCAC 333
>SB_24485| Best HMM Match : zf-CCCH (HMM E-Value=3e-09)
Length = 321
Score = 27.5 bits (58), Expect = 5.5
Identities = 12/47 (25%), Positives = 24/47 (51%), Gaps = 2/47 (4%)
Frame = +3
Query: 48 ENFRKHMANSSEQPLHIDF--SIQVLSSGSWPFQQSTSFQLPTELER 182
E F K E+ +H+DF + +S+G + +++L T+ +R
Sbjct: 63 EGFAKEKGQDEEEKIHVDFKSTRSAMSAGPTDAGATATYELDTDFDR 109
>SB_47437| Best HMM Match : GlcNAc_2-epim (HMM E-Value=2.1)
Length = 786
Score = 27.5 bits (58), Expect = 5.5
Identities = 13/45 (28%), Positives = 24/45 (53%), Gaps = 4/45 (8%)
Frame = +3
Query: 15 FQDIGVSKDLNENFRKHMANSSEQP----LHIDFSIQVLSSGSWP 137
F+D ++K LNENF + E+P +++ + ++ G WP
Sbjct: 6 FEDENIAKILNENFIPVKVDREERPDVDRVYMTYIQAMVGGGGWP 50
>SB_38512| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 306
Score = 27.5 bits (58), Expect = 5.5
Identities = 13/45 (28%), Positives = 24/45 (53%), Gaps = 4/45 (8%)
Frame = +3
Query: 15 FQDIGVSKDLNENFRKHMANSSEQP----LHIDFSIQVLSSGSWP 137
F+D ++K LNENF + E+P +++ + ++ G WP
Sbjct: 6 FEDENIAKILNENFIPVKVDREERPDVDRVYMTYIQAMVGGGGWP 50
>SB_26989| Best HMM Match : Chromo (HMM E-Value=5.5e-10)
Length = 517
Score = 27.5 bits (58), Expect = 5.5
Identities = 8/11 (72%), Positives = 9/11 (81%)
Frame = -3
Query: 142 WKGHEPDDSTW 110
WKG+ PDD TW
Sbjct: 23 WKGYTPDDDTW 33
>SB_53727| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 374
Score = 27.1 bits (57), Expect = 7.3
Identities = 14/52 (26%), Positives = 26/52 (50%)
Frame = +2
Query: 179 ALRAPVHHVLLVATLRAQAELALQHGKGELLTNCFKNRYTLEASTFQMAVLL 334
A+ P+H+ ++V RA +A G ++T +Y AST+ A+ +
Sbjct: 134 AINKPLHYRVVVTKYRAYKAIAATWGAAMIVTAISFIQYRDNASTYGWAIFM 185
>SB_55359| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2516
Score = 26.6 bits (56), Expect = 9.6
Identities = 19/52 (36%), Positives = 22/52 (42%), Gaps = 1/52 (1%)
Frame = -3
Query: 190 CTERSSSVGSWKDVDCWKGHEPDDSTWMLKSMC-RGCSELFAMCFLKFSFKS 38
CTE G W D DC K + T C G S+ A C+ KFS S
Sbjct: 90 CTELLYQDGLWNDDDCSKEYSFICKTLKAPLSCDAGWSQYGASCY-KFSTSS 140
>SB_43550| Best HMM Match : Laminin_EGF (HMM E-Value=0)
Length = 1182
Score = 26.6 bits (56), Expect = 9.6
Identities = 10/17 (58%), Positives = 11/17 (64%)
Frame = -2
Query: 389 CRCAAPAGGPSTRCCRC 339
C+C A GGP RCC C
Sbjct: 501 CQCKAGFGGP--RCCEC 515
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.317 0.129 0.408
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,157,049
Number of Sequences: 59808
Number of extensions: 239471
Number of successful extensions: 777
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 697
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 772
length of database: 16,821,457
effective HSP length: 76
effective length of database: 12,276,049
effective search space used: 908427626
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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