Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV120397.Seq
(728 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ... 26 0.27
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ... 26 0.27
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ... 26 0.27
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ... 26 0.27
AY362543-1|AAQ63455.1| 677|Tribolium castaneum chitin synthase ... 22 4.4
AJ223627-1|CAA11500.1| 371|Tribolium castaneum orthodenticle-1 ... 22 5.8
DQ855502-1|ABH88189.1| 126|Tribolium castaneum chemosensory pro... 21 7.7
DQ855495-1|ABH88182.1| 126|Tribolium castaneum chemosensory pro... 21 7.7
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ... 21 7.7
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ... 21 7.7
AY043292-1|AAK96031.1| 323|Tribolium castaneum homeodomain tran... 21 7.7
AF228509-1|AAF69136.1| 325|Tribolium castaneum prothoraxless pr... 21 7.7
>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
variant 2 protein.
Length = 1558
Score = 26.2 bits (55), Expect = 0.27
Identities = 13/45 (28%), Positives = 22/45 (48%)
Frame = +3
Query: 414 IEFMDKTTELNLRSCQPKSFTYTFTTIWDTMHFSVSSSTIWCIRE 548
I F+ K ++ Q + F Y F ++W + F VS I ++E
Sbjct: 278 IPFIKKLGKIKENLEQSRYFIYMFVSVWKCLLFFVSVLFILLVKE 322
>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
variant 1 protein.
Length = 1558
Score = 26.2 bits (55), Expect = 0.27
Identities = 13/45 (28%), Positives = 22/45 (48%)
Frame = +3
Query: 414 IEFMDKTTELNLRSCQPKSFTYTFTTIWDTMHFSVSSSTIWCIRE 548
I F+ K ++ Q + F Y F ++W + F VS I ++E
Sbjct: 278 IPFIKKLGKIKENLEQSRYFIYMFVSVWKCLLFFVSVLFILLVKE 322
>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
CHS1B protein.
Length = 1558
Score = 26.2 bits (55), Expect = 0.27
Identities = 13/45 (28%), Positives = 22/45 (48%)
Frame = +3
Query: 414 IEFMDKTTELNLRSCQPKSFTYTFTTIWDTMHFSVSSSTIWCIRE 548
I F+ K ++ Q + F Y F ++W + F VS I ++E
Sbjct: 278 IPFIKKLGKIKENLEQSRYFIYMFVSVWKCLLFFVSVLFILLVKE 322
>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
CHS1A protein.
Length = 1558
Score = 26.2 bits (55), Expect = 0.27
Identities = 13/45 (28%), Positives = 22/45 (48%)
Frame = +3
Query: 414 IEFMDKTTELNLRSCQPKSFTYTFTTIWDTMHFSVSSSTIWCIRE 548
I F+ K ++ Q + F Y F ++W + F VS I ++E
Sbjct: 278 IPFIKKLGKIKENLEQSRYFIYMFVSVWKCLLFFVSVLFILLVKE 322
>AY362543-1|AAQ63455.1| 677|Tribolium castaneum chitin synthase
protein.
Length = 677
Score = 22.2 bits (45), Expect = 4.4
Identities = 11/36 (30%), Positives = 19/36 (52%)
Frame = -3
Query: 366 RSTAAPRIFECLCISSNTQNGISKLLAKTTIW*GAP 259
RS P+I E + +Q+ I+++ A T+W P
Sbjct: 278 RSDEGPQITELEPETIESQDAITRIYAIATMWHETP 313
>AJ223627-1|CAA11500.1| 371|Tribolium castaneum orthodenticle-1
protein protein.
Length = 371
Score = 21.8 bits (44), Expect = 5.8
Identities = 12/37 (32%), Positives = 16/37 (43%)
Frame = +2
Query: 392 HGLATVSHRIYGQNHRTQFAFVPAQEFYLHVYHHMGH 502
HG T SH Y QN+ + + Q YL+ H
Sbjct: 291 HGHNTSSHNYYAQNYAPTY-YGQMQPDYLNSQTTQNH 326
>DQ855502-1|ABH88189.1| 126|Tribolium castaneum chemosensory
protein 16 protein.
Length = 126
Score = 21.4 bits (43), Expect = 7.7
Identities = 10/24 (41%), Positives = 13/24 (54%)
Frame = +3
Query: 297 YLYHFACLMKYKDIQKYEVQQLIE 368
+L ACL Y Q+Y V Q I+
Sbjct: 6 FLLALACLKTYVSSQEYLVPQNID 29
>DQ855495-1|ABH88182.1| 126|Tribolium castaneum chemosensory
protein 9 protein.
Length = 126
Score = 21.4 bits (43), Expect = 7.7
Identities = 10/24 (41%), Positives = 13/24 (54%)
Frame = +3
Query: 297 YLYHFACLMKYKDIQKYEVQQLIE 368
+L ACL Y Q+Y V Q I+
Sbjct: 6 FLLALACLKTYVSSQEYLVPQNID 29
>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
protein.
Length = 1464
Score = 21.4 bits (43), Expect = 7.7
Identities = 11/36 (30%), Positives = 19/36 (52%)
Frame = -3
Query: 366 RSTAAPRIFECLCISSNTQNGISKLLAKTTIW*GAP 259
RS P+I E + +Q+ I+++ A T+W P
Sbjct: 511 RSDEGPQITELEPETIESQDAITRIYACGTMWHETP 546
>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
CHS2 protein.
Length = 1464
Score = 21.4 bits (43), Expect = 7.7
Identities = 11/36 (30%), Positives = 19/36 (52%)
Frame = -3
Query: 366 RSTAAPRIFECLCISSNTQNGISKLLAKTTIW*GAP 259
RS P+I E + +Q+ I+++ A T+W P
Sbjct: 511 RSDEGPQITELEPETIESQDAITRIYACGTMWHETP 546
>AY043292-1|AAK96031.1| 323|Tribolium castaneum homeodomain
transcription factor Prothoraxlessprotein.
Length = 323
Score = 21.4 bits (43), Expect = 7.7
Identities = 6/6 (100%), Positives = 6/6 (100%)
Frame = +2
Query: 488 HHMGHH 505
HHMGHH
Sbjct: 165 HHMGHH 170
>AF228509-1|AAF69136.1| 325|Tribolium castaneum prothoraxless
protein.
Length = 325
Score = 21.4 bits (43), Expect = 7.7
Identities = 6/6 (100%), Positives = 6/6 (100%)
Frame = +2
Query: 488 HHMGHH 505
HHMGHH
Sbjct: 167 HHMGHH 172
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 180,495
Number of Sequences: 336
Number of extensions: 3986
Number of successful extensions: 21
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19467635
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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