Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV120397.Seq
(728 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ000387-3|CAA04050.1| 1217|Drosophila melanogaster reverse tran... 30 2.8
X98310-1|CAA66954.1| 503|Drosophila melanogaster ARI protein pr... 29 4.9
X98309-1|CAA66953.1| 503|Drosophila melanogaster ARI protein pr... 29 4.9
BT004849-1|AAO45205.1| 197|Drosophila melanogaster RE69116p pro... 29 4.9
AE014298-2679|AAS65398.1| 503|Drosophila melanogaster CG5659-PC... 29 4.9
AE014298-2678|AAF48807.1| 503|Drosophila melanogaster CG5659-PB... 29 4.9
AE014298-2677|AAN09462.1| 503|Drosophila melanogaster CG5659-PA... 29 4.9
BT011051-1|AAR31122.1| 149|Drosophila melanogaster RE74912p pro... 29 8.6
AE014297-1933|AAF55130.1| 537|Drosophila melanogaster CG3984-PA... 29 8.6
>AJ000387-3|CAA04050.1| 1217|Drosophila melanogaster reverse
transcriptase protein.
Length = 1217
Score = 30.3 bits (65), Expect = 2.8
Identities = 15/51 (29%), Positives = 27/51 (52%)
Frame = +2
Query: 503 HAFLSLIIDDMVYTRDKSSLDFVMQQLKTMKVLFYNVFFHTTVRHVPRSLY 655
H+ L+ I ++ TR K L +++ + V+ YN H+T +H P L+
Sbjct: 1025 HSSLTEIYRIILDTRKKHKLPTDHEEIMSETVITYNNAIHSTTKHTPFELF 1075
>X98310-1|CAA66954.1| 503|Drosophila melanogaster ARI protein
protein.
Length = 503
Score = 29.5 bits (63), Expect = 4.9
Identities = 16/73 (21%), Positives = 34/73 (46%), Gaps = 2/73 (2%)
Frame = +3
Query: 273 KLLSSQATYLYHFACLMKYKDIQKYE--VQQLIEWAINASPDMDLQQFRIEFMDKTTELN 446
KL SS A YL+++ M + K+E + ++ + ++ ++F+ K ++
Sbjct: 353 KLRSSLARYLHYYNRYMNHMQSMKFENKLYASVKQKMEEMQQHNMSWIEVQFLKKAVDIL 412
Query: 447 LRSCQPKSFTYTF 485
+ Q +TY F
Sbjct: 413 CQCRQTLMYTYVF 425
>X98309-1|CAA66953.1| 503|Drosophila melanogaster ARI protein
protein.
Length = 503
Score = 29.5 bits (63), Expect = 4.9
Identities = 16/73 (21%), Positives = 34/73 (46%), Gaps = 2/73 (2%)
Frame = +3
Query: 273 KLLSSQATYLYHFACLMKYKDIQKYE--VQQLIEWAINASPDMDLQQFRIEFMDKTTELN 446
KL SS A YL+++ M + K+E + ++ + ++ ++F+ K ++
Sbjct: 353 KLRSSLARYLHYYNRYMNHMQSMKFENKLYASVKQKMEEMQQHNMSWIEVQFLKKAVDIL 412
Query: 447 LRSCQPKSFTYTF 485
+ Q +TY F
Sbjct: 413 CQCRQTLMYTYVF 425
>BT004849-1|AAO45205.1| 197|Drosophila melanogaster RE69116p
protein.
Length = 197
Score = 29.5 bits (63), Expect = 4.9
Identities = 16/73 (21%), Positives = 34/73 (46%), Gaps = 2/73 (2%)
Frame = +3
Query: 273 KLLSSQATYLYHFACLMKYKDIQKYE--VQQLIEWAINASPDMDLQQFRIEFMDKTTELN 446
KL SS A YL+++ M + K+E + ++ + ++ ++F+ K ++
Sbjct: 47 KLRSSLARYLHYYNRYMNHMQSMKFENKLYASVKQKMEEMQQHNMSWIEVQFLKKAVDIL 106
Query: 447 LRSCQPKSFTYTF 485
+ Q +TY F
Sbjct: 107 CQCRQTLMYTYVF 119
>AE014298-2679|AAS65398.1| 503|Drosophila melanogaster CG5659-PC,
isoform C protein.
Length = 503
Score = 29.5 bits (63), Expect = 4.9
Identities = 16/73 (21%), Positives = 34/73 (46%), Gaps = 2/73 (2%)
Frame = +3
Query: 273 KLLSSQATYLYHFACLMKYKDIQKYE--VQQLIEWAINASPDMDLQQFRIEFMDKTTELN 446
KL SS A YL+++ M + K+E + ++ + ++ ++F+ K ++
Sbjct: 353 KLRSSLARYLHYYNRYMNHMQSMKFENKLYASVKQKMEEMQQHNMSWIEVQFLKKAVDIL 412
Query: 447 LRSCQPKSFTYTF 485
+ Q +TY F
Sbjct: 413 CQCRQTLMYTYVF 425
>AE014298-2678|AAF48807.1| 503|Drosophila melanogaster CG5659-PB,
isoform B protein.
Length = 503
Score = 29.5 bits (63), Expect = 4.9
Identities = 16/73 (21%), Positives = 34/73 (46%), Gaps = 2/73 (2%)
Frame = +3
Query: 273 KLLSSQATYLYHFACLMKYKDIQKYE--VQQLIEWAINASPDMDLQQFRIEFMDKTTELN 446
KL SS A YL+++ M + K+E + ++ + ++ ++F+ K ++
Sbjct: 353 KLRSSLARYLHYYNRYMNHMQSMKFENKLYASVKQKMEEMQQHNMSWIEVQFLKKAVDIL 412
Query: 447 LRSCQPKSFTYTF 485
+ Q +TY F
Sbjct: 413 CQCRQTLMYTYVF 425
>AE014298-2677|AAN09462.1| 503|Drosophila melanogaster CG5659-PA,
isoform A protein.
Length = 503
Score = 29.5 bits (63), Expect = 4.9
Identities = 16/73 (21%), Positives = 34/73 (46%), Gaps = 2/73 (2%)
Frame = +3
Query: 273 KLLSSQATYLYHFACLMKYKDIQKYE--VQQLIEWAINASPDMDLQQFRIEFMDKTTELN 446
KL SS A YL+++ M + K+E + ++ + ++ ++F+ K ++
Sbjct: 353 KLRSSLARYLHYYNRYMNHMQSMKFENKLYASVKQKMEEMQQHNMSWIEVQFLKKAVDIL 412
Query: 447 LRSCQPKSFTYTF 485
+ Q +TY F
Sbjct: 413 CQCRQTLMYTYVF 425
>BT011051-1|AAR31122.1| 149|Drosophila melanogaster RE74912p
protein.
Length = 149
Score = 28.7 bits (61), Expect = 8.6
Identities = 17/50 (34%), Positives = 24/50 (48%)
Frame = -2
Query: 259 DLKLAKGL*DETNTTNSCLCNEKKAASAVSWRLAKRSCCICVRRRPQRRC 110
DLK +G DE +T + +AS +WRL +R+ C R P C
Sbjct: 101 DLK-GQGALDEKGSTRPHWIFWRSSASRPAWRLPQRNACQSRIRNPSPSC 149
>AE014297-1933|AAF55130.1| 537|Drosophila melanogaster CG3984-PA
protein.
Length = 537
Score = 28.7 bits (61), Expect = 8.6
Identities = 14/41 (34%), Positives = 21/41 (51%)
Frame = +1
Query: 433 PQNSICVRASPRVLLTRLPPYGTPCISQSHHRRYGVYARQK 555
P + C +PRV T+ G C S+SHH+ V + +K
Sbjct: 400 PSSPCCNVFAPRVCATQAGQDGYKCFSRSHHQCGSVCSARK 440
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 33,127,322
Number of Sequences: 53049
Number of extensions: 716899
Number of successful extensions: 1980
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1876
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1978
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3273062859
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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