Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120397.Seq
         (728 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z93377-3|CAB07580.1|  358|Caenorhabditis elegans Hypothetical pr...    30   1.5  
AL023838-2|CAA19505.1|  452|Caenorhabditis elegans Hypothetical ...    30   1.9  
Z70310-7|CAA94364.1|  607|Caenorhabditis elegans Hypothetical pr...    29   4.5  
U23452-5|AAK31546.1|  304|Caenorhabditis elegans Hypothetical pr...    29   4.5  
AC024785-6|AAF60605.2|  467|Caenorhabditis elegans C-type lectin...    29   4.5  
AL110478-3|CAB54348.1|  380|Caenorhabditis elegans Hypothetical ...    28   5.9  

>Z93377-3|CAB07580.1|  358|Caenorhabditis elegans Hypothetical
           protein F13A7.7 protein.
          Length = 358

 Score = 30.3 bits (65), Expect = 1.5
 Identities = 22/82 (26%), Positives = 41/82 (50%)
 Frame = +2

Query: 398 LATVSHRIYGQNHRTQFAFVPAQEFYLHVYHHMGHHAFLSLIIDDMVYTRDKSSLDFVMQ 577
           +A V  ++ G+N   Q  F   +E Y+ V+++  HH F+   I D + T D +    +++
Sbjct: 87  MADVRKQLTGRNPAVQVLFDKTREHYILVHYNPRHH-FIE--IYDSLQTFDTNGKPTIIR 143

Query: 578 QLKTMKVLFYNVFFHTTVRHVP 643
           ++    V   N+F H   R +P
Sbjct: 144 EI---CVQISNMFGHLFRRDIP 162


>AL023838-2|CAA19505.1|  452|Caenorhabditis elegans Hypothetical
           protein Y43C5A.2 protein.
          Length = 452

 Score = 29.9 bits (64), Expect = 1.9
 Identities = 14/33 (42%), Positives = 16/33 (48%)
 Frame = -1

Query: 110 YVSADTDADEPIIYFENITECLTDDQCDKFTYF 12
           Y S  TD       F+N T  L  D CD+F YF
Sbjct: 327 YSSTYTDLGAKFSTFDNFTGPLGKDDCDEFQYF 359


>Z70310-7|CAA94364.1|  607|Caenorhabditis elegans Hypothetical
           protein R11A8.4 protein.
          Length = 607

 Score = 28.7 bits (61), Expect = 4.5
 Identities = 13/46 (28%), Positives = 24/46 (52%)
 Frame = +2

Query: 542 TRDKSSLDFVMQQLKTMKVLFYNVFFHTTVRHVPRSLYERQRFPHF 679
           T DK  +D ++    ++KV    +  H   ++VP+ L  R+  PH+
Sbjct: 314 TEDKHKVDLIVVIGSSLKVRPVALIPHCVDKNVPQILINRESLPHY 359


>U23452-5|AAK31546.1|  304|Caenorhabditis elegans Hypothetical
           protein R07G3.6 protein.
          Length = 304

 Score = 28.7 bits (61), Expect = 4.5
 Identities = 13/22 (59%), Positives = 15/22 (68%)
 Frame = -2

Query: 136 VRRRPQRRCTLAPTRTPTSLLF 71
           +RR+PQ   TL PT TPT  LF
Sbjct: 159 LRRKPQSIPTLPPTTTPTPRLF 180


>AC024785-6|AAF60605.2|  467|Caenorhabditis elegans C-type lectin
           protein 74 protein.
          Length = 467

 Score = 28.7 bits (61), Expect = 4.5
 Identities = 13/29 (44%), Positives = 17/29 (58%)
 Frame = +2

Query: 254 QIGAPYQIVVFASNLLIPFCVFDEIQRHS 340
           Q+G P  ++   SN L PF V D +QR S
Sbjct: 169 QVGGPQTVLFAYSNDLNPFIVMDTLQRSS 197


>AL110478-3|CAB54348.1|  380|Caenorhabditis elegans Hypothetical
           protein Y26D4A.8 protein.
          Length = 380

 Score = 28.3 bits (60), Expect = 5.9
 Identities = 16/44 (36%), Positives = 24/44 (54%), Gaps = 4/44 (9%)
 Frame = +2

Query: 314 VFDEIQRHSKIRGAAVDRMGH*RIPRHGLA----TVSHRIYGQN 433
           +F E+Q+HS+I  A V+++   R   H LA    T  H  YG +
Sbjct: 285 LFKELQKHSRILYATVNKIPVVRKTNHALACVRKTTEHLAYGSS 328


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,356,583
Number of Sequences: 27780
Number of extensions: 379380
Number of successful extensions: 969
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 935
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 968
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1718929214
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)