Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120395.Seq
         (715 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X98185-1|CAA66860.1|  123|Anopheles gambiae histone H2B protein.       27   0.58 
AY705394-1|AAU12503.1|  557|Anopheles gambiae nicotinic acetylch...    23   9.5  

>X98185-1|CAA66860.1|  123|Anopheles gambiae histone H2B protein.
          Length = 123

 Score = 27.1 bits (57), Expect = 0.58
 Identities = 11/26 (42%), Positives = 16/26 (61%)
 Frame = +1

Query: 367 EQVYPDKDFSLKLKRVINMFLNDEIE 444
           +QV+PD   S K   ++N F+ND  E
Sbjct: 45  KQVHPDTGISSKAMSIMNSFVNDIFE 70


>AY705394-1|AAU12503.1|  557|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 1 protein.
          Length = 557

 Score = 23.0 bits (47), Expect = 9.5
 Identities = 8/16 (50%), Positives = 12/16 (75%)
 Frame = +1

Query: 364 CEQVYPDKDFSLKLKR 411
           CE+ YPD  F++ L+R
Sbjct: 222 CEEPYPDIIFNITLRR 237


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 645,731
Number of Sequences: 2352
Number of extensions: 11437
Number of successful extensions: 14
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 73177125
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)