Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120391.Seq
         (829 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q4Q624 Cluster: Putative uncharacterized protein; n=3; ...    33   6.6  
UniRef50_A0V0Y3 Cluster: ABC transporter related; n=1; Clostridi...    33   8.7  
UniRef50_Q2TYN6 Cluster: Predicted protein; n=1; Aspergillus ory...    33   8.7  

>UniRef50_Q4Q624 Cluster: Putative uncharacterized protein; n=3;
           Leishmania|Rep: Putative uncharacterized protein -
           Leishmania major
          Length = 521

 Score = 33.5 bits (73), Expect = 6.6
 Identities = 14/45 (31%), Positives = 25/45 (55%)
 Frame = +2

Query: 509 HYHNWTKLQWDHQGSVSFLIKKDSSKSIHPVESYEVTNKKNIQSN 643
           H H  T+ Q D   ++  L+K+  SKS+H   S+  + K++  S+
Sbjct: 47  HTHTHTRRQEDTSVAMKTLVKRQRSKSVHEARSHRTSGKESTTSS 91


>UniRef50_A0V0Y3 Cluster: ABC transporter related; n=1; Clostridium
           cellulolyticum H10|Rep: ABC transporter related -
           Clostridium cellulolyticum H10
          Length = 405

 Score = 33.1 bits (72), Expect = 8.7
 Identities = 14/28 (50%), Positives = 19/28 (67%)
 Frame = +1

Query: 334 IDML*QKPTSNIKNKIFQNKLIYTKNNN 417
           ID L +KP SNI +++F   L Y KN+N
Sbjct: 310 IDYLIEKPFSNISDELFNENLAYIKNSN 337


>UniRef50_Q2TYN6 Cluster: Predicted protein; n=1; Aspergillus
           oryzae|Rep: Predicted protein - Aspergillus oryzae
          Length = 191

 Score = 33.1 bits (72), Expect = 8.7
 Identities = 21/61 (34%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
 Frame = +2

Query: 44  VEVNREHLLSTYFI-RKIGTRLRDSNTGASLDTNALDILSFRPRRLLRYGKVYRHHAVFA 220
           ++V  E LLS+ F  R +G  + DS+TGASL      +L   P  ++R    Y  + + A
Sbjct: 59  LDVLHERLLSSDFNERLLGLLVGDSDTGASLPCEKQTLLPLSPLDVVRRKTAYLAYRIVA 118

Query: 221 P 223
           P
Sbjct: 119 P 119


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 782,396,306
Number of Sequences: 1657284
Number of extensions: 15621478
Number of successful extensions: 32896
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 31622
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 32891
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 71734006925
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)