Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120391.Seq
         (829 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X99404-1|CAA67781.1|  338|Homo sapiens Berg36 protein.                 30   8.9  
X79066-1|CAA55670.1|  338|Homo sapiens ERF-1 protein.                  30   8.9  
BT019468-1|AAV38275.1|  338|Homo sapiens zinc finger protein 36,...    30   8.9  
BC018340-1|AAH18340.1|  338|Homo sapiens zinc finger protein 36,...    30   8.9  

>X99404-1|CAA67781.1|  338|Homo sapiens Berg36 protein.
          Length = 338

 Score = 30.3 bits (65), Expect = 8.9
 Identities = 13/32 (40%), Positives = 19/32 (59%)
 Frame = -2

Query: 183 LSSRRGLKDKMSSAFVSSDAPVFESRRRVPIF 88
           LS + G     SS+   SD+P  ++ RR+PIF
Sbjct: 299 LSDQEGYLSSSSSSHSGSDSPTLDNSRRLPIF 330


>X79066-1|CAA55670.1|  338|Homo sapiens ERF-1 protein.
          Length = 338

 Score = 30.3 bits (65), Expect = 8.9
 Identities = 13/32 (40%), Positives = 19/32 (59%)
 Frame = -2

Query: 183 LSSRRGLKDKMSSAFVSSDAPVFESRRRVPIF 88
           LS + G     SS+   SD+P  ++ RR+PIF
Sbjct: 299 LSDQEGYLSSSSSSHSGSDSPTLDNSRRLPIF 330


>BT019468-1|AAV38275.1|  338|Homo sapiens zinc finger protein 36,
           C3H type-like 1 protein.
          Length = 338

 Score = 30.3 bits (65), Expect = 8.9
 Identities = 13/32 (40%), Positives = 19/32 (59%)
 Frame = -2

Query: 183 LSSRRGLKDKMSSAFVSSDAPVFESRRRVPIF 88
           LS + G     SS+   SD+P  ++ RR+PIF
Sbjct: 299 LSDQEGYLSSSSSSHSGSDSPTLDNSRRLPIF 330


>BC018340-1|AAH18340.1|  338|Homo sapiens zinc finger protein 36,
           C3H type-like 1 protein.
          Length = 338

 Score = 30.3 bits (65), Expect = 8.9
 Identities = 13/32 (40%), Positives = 19/32 (59%)
 Frame = -2

Query: 183 LSSRRGLKDKMSSAFVSSDAPVFESRRRVPIF 88
           LS + G     SS+   SD+P  ++ RR+PIF
Sbjct: 299 LSDQEGYLSSSSSSHSGSDSPTLDNSRRLPIF 330


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 111,280,420
Number of Sequences: 237096
Number of extensions: 2274552
Number of successful extensions: 2979
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 2900
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2979
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10370898348
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)