Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120391.Seq
         (829 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT023721-1|AAY85121.1|  673|Drosophila melanogaster AT01259p pro...    31   1.9  
BT001274-1|AAN71030.1|  669|Drosophila melanogaster AT05655p pro...    31   1.9  
AE014297-353|AAF51954.1|  669|Drosophila melanogaster CG1193-PB,...    31   1.9  
BT024284-1|ABC86346.1| 1431|Drosophila melanogaster IP14020p pro...    29   7.8  
AE013599-2066|AAM70973.1|  599|Drosophila melanogaster CG30468-P...    29   7.8  

>BT023721-1|AAY85121.1|  673|Drosophila melanogaster AT01259p
           protein.
          Length = 673

 Score = 31.1 bits (67), Expect = 1.9
 Identities = 20/63 (31%), Positives = 29/63 (46%)
 Frame = -3

Query: 299 SILRFSATTRTTSVLYRQIESKLRTREQRPHDADIPYHT*VVVVA*RIRCPVHSYLAMHR 120
           S +R  + T +  VL R   + L TR Q P +  + Y   V  V      P HS   +H+
Sbjct: 47  SFMRQRSLTSSNPVLGRS--NALATRPQSPPNVQVEYEVAVPFVPTYRHTPYHSLWDLHQ 104

Query: 119 CSN 111
           CS+
Sbjct: 105 CSS 107


>BT001274-1|AAN71030.1|  669|Drosophila melanogaster AT05655p
           protein.
          Length = 669

 Score = 31.1 bits (67), Expect = 1.9
 Identities = 20/63 (31%), Positives = 29/63 (46%)
 Frame = -3

Query: 299 SILRFSATTRTTSVLYRQIESKLRTREQRPHDADIPYHT*VVVVA*RIRCPVHSYLAMHR 120
           S +R  + T +  VL R   + L TR Q P +  + Y   V  V      P HS   +H+
Sbjct: 47  SFMRQRSLTSSNPVLGRS--NALATRPQSPPNVQVEYEVAVPFVPTYRHTPYHSLWDLHQ 104

Query: 119 CSN 111
           CS+
Sbjct: 105 CSS 107


>AE014297-353|AAF51954.1|  669|Drosophila melanogaster CG1193-PB,
           isoform B protein.
          Length = 669

 Score = 31.1 bits (67), Expect = 1.9
 Identities = 20/63 (31%), Positives = 29/63 (46%)
 Frame = -3

Query: 299 SILRFSATTRTTSVLYRQIESKLRTREQRPHDADIPYHT*VVVVA*RIRCPVHSYLAMHR 120
           S +R  + T +  VL R   + L TR Q P +  + Y   V  V      P HS   +H+
Sbjct: 47  SFMRQRSLTSSNPVLGRS--NALATRPQSPPNVQVEYEVAVPFVPTYRHTPYHSLWDLHQ 104

Query: 119 CSN 111
           CS+
Sbjct: 105 CSS 107


>BT024284-1|ABC86346.1| 1431|Drosophila melanogaster IP14020p
           protein.
          Length = 1431

 Score = 29.1 bits (62), Expect = 7.8
 Identities = 14/32 (43%), Positives = 19/32 (59%)
 Frame = +3

Query: 711 EYVICECLISSKLCNNAIRCVVQ*LLVMHCRL 806
           E +IC  L+ SK  NNA+ C +  L   HC+L
Sbjct: 741 EGIICHLLLKSKPQNNAV-CQILPLFNQHCKL 771


>AE013599-2066|AAM70973.1|  599|Drosophila melanogaster CG30468-PA
           protein.
          Length = 599

 Score = 29.1 bits (62), Expect = 7.8
 Identities = 13/33 (39%), Positives = 18/33 (54%)
 Frame = +2

Query: 140 NALDILSFRPRRLLRYGKVYRHHAVFAPEFGVS 238
           N  DILS   RR L Y  ++  H +   EFG++
Sbjct: 483 NQFDILSIPLRRHLPYRDIFEEHMLLQKEFGLT 515


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 35,242,961
Number of Sequences: 53049
Number of extensions: 731382
Number of successful extensions: 1495
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1443
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1495
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3921660132
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)