Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120391.Seq
         (829 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL117193-1|CAB54981.1|  767|Caenorhabditis elegans Hypothetical ...    31   0.76 
Z70266-6|CAD57691.1|  795|Caenorhabditis elegans Hypothetical pr...    28   9.4  
Z70266-5|CAA94208.1|  798|Caenorhabditis elegans Hypothetical pr...    28   9.4  
U41007-3|AAA82267.1|  297|Caenorhabditis elegans Hypothetical pr...    28   9.4  
AL023827-4|CAD57709.1|  795|Caenorhabditis elegans Hypothetical ...    28   9.4  
AL023827-3|CAA19446.1|  798|Caenorhabditis elegans Hypothetical ...    28   9.4  

>AL117193-1|CAB54981.1|  767|Caenorhabditis elegans Hypothetical
           protein Y105C5A.1 protein.
          Length = 767

 Score = 31.5 bits (68), Expect = 0.76
 Identities = 19/62 (30%), Positives = 27/62 (43%)
 Frame = +3

Query: 573 KIHQNRFTQSKVMR*QTKKTYSRTFFEVG*KDYHSKQKY*FKIALKEYVICECLISSKLC 752
           KI        K  R Q ++   R +     + YH + +  FK   K  V+C C  + KLC
Sbjct: 440 KIFDKLLQDKKTTRRQLQEKAMRNYHIAEVQQYHYRFRKFFKYQEKYGVVCNC--AEKLC 497

Query: 753 NN 758
           NN
Sbjct: 498 NN 499


>Z70266-6|CAD57691.1|  795|Caenorhabditis elegans Hypothetical
           protein C40C9.5b protein.
          Length = 795

 Score = 27.9 bits (59), Expect = 9.4
 Identities = 9/28 (32%), Positives = 19/28 (67%)
 Frame = +3

Query: 171 DDYLGMVRYIGIMRSLLPSSEFRFNLSV 254
           DD   + +Y+GI   + P+ ++RFN+++
Sbjct: 40  DDLPPVAQYLGIPYGVAPTGQYRFNMAI 67


>Z70266-5|CAA94208.1|  798|Caenorhabditis elegans Hypothetical
           protein C40C9.5a protein.
          Length = 798

 Score = 27.9 bits (59), Expect = 9.4
 Identities = 9/28 (32%), Positives = 19/28 (67%)
 Frame = +3

Query: 171 DDYLGMVRYIGIMRSLLPSSEFRFNLSV 254
           DD   + +Y+GI   + P+ ++RFN+++
Sbjct: 40  DDLPPVAQYLGIPYGVAPTGQYRFNMAI 67


>U41007-3|AAA82267.1|  297|Caenorhabditis elegans Hypothetical
           protein C33H5.8 protein.
          Length = 297

 Score = 27.9 bits (59), Expect = 9.4
 Identities = 11/33 (33%), Positives = 21/33 (63%)
 Frame = +3

Query: 156 YPLGHDDYLGMVRYIGIMRSLLPSSEFRFNLSV 254
           +P  + D++G V  +   +SLLP +E+  N+S+
Sbjct: 180 HPKDYQDFVGAVNMLKRAQSLLPLAEYFLNISM 212


>AL023827-4|CAD57709.1|  795|Caenorhabditis elegans Hypothetical
           protein C40C9.5b protein.
          Length = 795

 Score = 27.9 bits (59), Expect = 9.4
 Identities = 9/28 (32%), Positives = 19/28 (67%)
 Frame = +3

Query: 171 DDYLGMVRYIGIMRSLLPSSEFRFNLSV 254
           DD   + +Y+GI   + P+ ++RFN+++
Sbjct: 40  DDLPPVAQYLGIPYGVAPTGQYRFNMAI 67


>AL023827-3|CAA19446.1|  798|Caenorhabditis elegans Hypothetical
           protein C40C9.5a protein.
          Length = 798

 Score = 27.9 bits (59), Expect = 9.4
 Identities = 9/28 (32%), Positives = 19/28 (67%)
 Frame = +3

Query: 171 DDYLGMVRYIGIMRSLLPSSEFRFNLSV 254
           DD   + +Y+GI   + P+ ++RFN+++
Sbjct: 40  DDLPPVAQYLGIPYGVAPTGQYRFNMAI 67


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,817,408
Number of Sequences: 27780
Number of extensions: 401945
Number of successful extensions: 871
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 852
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 871
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 2050970610
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)