Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120391.Seq
         (829 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    23   2.6  
EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.          22   6.0  
EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.      22   6.0  
AF205594-1|AAQ13840.1|  156|Apis mellifera acid phosphatase prec...    22   8.0  
AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.                22   8.0  

>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 23.4 bits (48), Expect = 2.6
 Identities = 9/11 (81%), Positives = 9/11 (81%)
 Frame = -1

Query: 802 LQCITSNYCTT 770
           LQC TSNY TT
Sbjct: 769 LQCATSNYSTT 779


>EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.
          Length = 684

 Score = 22.2 bits (45), Expect = 6.0
 Identities = 11/31 (35%), Positives = 16/31 (51%)
 Frame = +3

Query: 294 NASTLLEGKNIIVNRHALTKTDFKYKEQDIP 386
           N+  L +  + ++     TKT  KYKE  IP
Sbjct: 172 NSEVLQKANHALIFGKLDTKTSGKYKEYIIP 202


>EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.
          Length = 684

 Score = 22.2 bits (45), Expect = 6.0
 Identities = 11/31 (35%), Positives = 16/31 (51%)
 Frame = +3

Query: 294 NASTLLEGKNIIVNRHALTKTDFKYKEQDIP 386
           N+  L +  + ++     TKT  KYKE  IP
Sbjct: 172 NSEVLQKANHALIFGKLDTKTSGKYKEYIIP 202


>AF205594-1|AAQ13840.1|  156|Apis mellifera acid phosphatase
           precursor protein.
          Length = 156

 Score = 21.8 bits (44), Expect = 8.0
 Identities = 9/23 (39%), Positives = 16/23 (69%)
 Frame = -2

Query: 354 FLLKHVYLQLCFSPLIR*KHFTI 286
           F+L + ++ L F+ L+R + FTI
Sbjct: 16  FILINYFIFLYFNSLVRFRRFTI 38


>AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.
          Length = 554

 Score = 21.8 bits (44), Expect = 8.0
 Identities = 8/13 (61%), Positives = 11/13 (84%)
 Frame = -3

Query: 239 SKLRTREQRPHDA 201
           +K+ TRE +PHDA
Sbjct: 149 TKVDTREVQPHDA 161


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 230,839
Number of Sequences: 438
Number of extensions: 5598
Number of successful extensions: 11
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 26460186
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)