Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV120389.Seq
(661 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q65330 Cluster: ORF 6; n=1; Autographa californica nucl... 157 3e-37
UniRef50_P21288 Cluster: Late expression factor 11; n=6; Nucleop... 146 5e-34
UniRef50_P21290 Cluster: Uncharacterized 25.3 kDa protein in 39K... 140 2e-32
UniRef50_Q7TLW3 Cluster: Late expression factor 11; n=1; Chorist... 84 2e-15
UniRef50_Q91GM8 Cluster: Late expression factor 11; n=5; Nucleop... 82 1e-14
UniRef50_A0EYS9 Cluster: Bv-e31; n=4; Nucleopolyhedrovirus|Rep: ... 79 1e-13
UniRef50_Q8V5V6 Cluster: ORF33; n=3; Nucleopolyhedrovirus|Rep: O... 65 1e-09
UniRef50_Q7T9V6 Cluster: ORF_59; n=9; Granulovirus|Rep: ORF_59 -... 59 8e-08
UniRef50_Q0IL81 Cluster: ORF38; n=2; Nucleopolyhedrovirus|Rep: O... 58 2e-07
UniRef50_Q9YMS9 Cluster: Late expression factor 11; n=1; Lymantr... 49 1e-04
UniRef50_Q80LT4 Cluster: Late expression factor 11; n=1; Adoxoph... 46 8e-04
UniRef50_P11042 Cluster: Early 39 kDa protein; n=5; Nucleopolyhe... 42 0.013
UniRef50_Q91BI6 Cluster: Late expression factor 11; n=1; Spodopt... 40 0.040
UniRef50_Q9J818 Cluster: Late expression factor 11; n=1; Spodopt... 38 0.21
UniRef50_Q7RFK5 Cluster: Homo sapiens HT019; n=1; Plasmodium yoe... 37 0.49
UniRef50_Q6QXJ5 Cluster: ORF52; n=3; Granulovirus|Rep: ORF52 - A... 36 1.1
UniRef50_Q9PVE8 Cluster: Cytochrome P450 3A30; n=4; Percomorpha|... 36 1.1
UniRef50_A5IZQ1 Cluster: Lef-11; n=1; Spodoptera litura granulov... 35 2.0
UniRef50_UPI00006CAEC2 Cluster: hypothetical protein TTHERM_0083... 34 2.6
UniRef50_A7JHR1 Cluster: DNA primase; n=12; Francisella tularens... 34 2.6
UniRef50_A0RN54 Cluster: GTP-binding protein; n=1; Campylobacter... 34 2.6
UniRef50_A2BHJ8 Cluster: Novel protein; n=4; Danio rerio|Rep: No... 34 3.5
UniRef50_Q91EZ7 Cluster: ORF58 LEF-11; n=4; Granulovirus|Rep: OR... 34 3.5
UniRef50_Q0BLM5 Cluster: Conserved protein; n=11; Francisella tu... 34 3.5
UniRef50_A5Z483 Cluster: Putative uncharacterized protein; n=1; ... 34 3.5
UniRef50_UPI00006CC894 Cluster: hypothetical protein TTHERM_0028... 33 4.6
UniRef50_Q4SK04 Cluster: Chromosome 10 SCAF14571, whole genome s... 33 6.1
UniRef50_O63897 Cluster: RNA-dependent RNA polymerase; n=1; Bryo... 33 6.1
UniRef50_Q86JH7 Cluster: Similar to Arabidopsis thaliana (Mouse-... 33 6.1
UniRef50_Q1ZRK1 Cluster: O-antigen chain length determinant prot... 33 8.0
UniRef50_A7LRV9 Cluster: Putative uncharacterized protein; n=1; ... 33 8.0
UniRef50_A6DDS4 Cluster: Putative uncharacterized protein; n=1; ... 33 8.0
>UniRef50_Q65330 Cluster: ORF 6; n=1; Autographa californica
nucleopolyhedrovirus|Rep: ORF 6 - Autographa californica
nuclear polyhedrosis virus (AcMNPV)
Length = 120
Score = 157 bits (380), Expect = 3e-37
Identities = 78/85 (91%), Positives = 80/85 (94%)
Frame = -2
Query: 255 LNSACISLRVKQSELHPPKCVQFLGGIVVVYLF*SGVEKVLQLPIIETLLDAAHKTKKFN 76
LNSACISLRVKQSE HPPKCVQFLGGIVV YLF SGVEKVLQLPII+T LDAAHK KKFN
Sbjct: 20 LNSACISLRVKQSESHPPKCVQFLGGIVV-YLFQSGVEKVLQLPIIKTRLDAAHKIKKFN 78
Query: 75 VIAVIVRDQLFVVHIIKIFVERHDG 1
VIAVIVRDQLFVVHIIK+FVERHDG
Sbjct: 79 VIAVIVRDQLFVVHIIKVFVERHDG 103
Score = 38.7 bits (86), Expect = 0.12
Identities = 18/19 (94%), Positives = 18/19 (94%)
Frame = -3
Query: 311 MCAQTSSVFIVCLSVLMAS 255
MCAQT SVFIVCLSVLMAS
Sbjct: 1 MCAQTFSVFIVCLSVLMAS 19
>UniRef50_P21288 Cluster: Late expression factor 11; n=6;
Nucleopolyhedrovirus|Rep: Late expression factor 11 -
Autographa californica nuclear polyhedrosis virus
(AcMNPV)
Length = 112
Score = 146 bits (353), Expect = 5e-34
Identities = 67/69 (97%), Positives = 69/69 (100%)
Frame = +1
Query: 253 QEAINTLKHTMNTEDVCAHMLDIVSFERIKEYIRANLGHFTVITDKCSKRKVCLHHKRIA 432
+EAINTLKHTMNTE+VCAHMLDIVSFERIKEYIRANLGHFTVITDKCSKRKVCLHHKRIA
Sbjct: 27 REAINTLKHTMNTENVCAHMLDIVSFERIKEYIRANLGHFTVITDKCSKRKVCLHHKRIA 86
Query: 433 RLLGIKKIY 459
RLLGIKKIY
Sbjct: 87 RLLGIKKIY 95
Score = 80.6 bits (190), Expect = 3e-14
Identities = 54/115 (46%), Positives = 66/115 (57%), Gaps = 4/115 (3%)
Frame = +2
Query: 176 MPPKNCTHLGGCNSDCLTRSEIQALFRKP-STRSSTQ*IQKTSARTCWTSCRLSV*KNI* 352
MPPKNCTHLGGC+SDCLTRSEIQALFR+ +T T + C + + I
Sbjct: 1 MPPKNCTHLGGCDSDCLTRSEIQALFREAINTLKHTM----NTENVCAHMLDIVSFERIK 56
Query: 353 ELI*AISQ*LP--TNVLSVRCVFITNE-LPGCWALKKYIHQEYKRVVSKVYKNQT 508
E I A T+ S R V + ++ + +KK HQEYKRVVSKVYK QT
Sbjct: 57 EYIRANLGHFTVITDKCSKRKVCLHHKRIARLLGIKKIYHQEYKRVVSKVYKKQT 111
>UniRef50_P21290 Cluster: Uncharacterized 25.3 kDa protein in
39K-P43 intergenic region; n=20;
Nucleopolyhedrovirus|Rep: Uncharacterized 25.3 kDa
protein in 39K-P43 intergenic region - Autographa
californica nuclear polyhedrosis virus (AcMNPV)
Length = 216
Score = 140 bits (340), Expect = 2e-32
Identities = 66/70 (94%), Positives = 67/70 (95%)
Frame = +1
Query: 1 AIVPLNKYFNYMNDKQLITYDYSNYIEFFSFVRSIKKRFDNRQLQDFFYATLKKIDNNDA 180
AIVPLNKYFNYMNDKQLITYDYSNYIEFF FVRS+K RFDNRQLQDFFYATLKKID NDA
Sbjct: 148 AIVPLNKYFNYMNDKQLITYDYSNYIEFFDFVRSVKARFDNRQLQDFFYATLKKID-NDA 206
Query: 181 PQKLHALRRV 210
PQKLHALRRV
Sbjct: 207 PQKLHALRRV 216
>UniRef50_Q7TLW3 Cluster: Late expression factor 11; n=1;
Choristoneura fumiferana MNPV|Rep: Late expression
factor 11 - Choristoneura fumiferana nuclear
polyhedrosis virus (CfMNPV)
Length = 107
Score = 84.2 bits (199), Expect = 2e-15
Identities = 38/62 (61%), Positives = 49/62 (79%)
Frame = +1
Query: 256 EAINTLKHTMNTEDVCAHMLDIVSFERIKEYIRANLGHFTVITDKCSKRKVCLHHKRIAR 435
EA+NTLK T+ ++VCAH+L+ + + +K+YIRANL FTVIT KCSKRKVC HH+RI R
Sbjct: 24 EAVNTLKRTLQVKNVCAHLLEADAGD-VKDYIRANLSRFTVITGKCSKRKVCNHHRRIKR 82
Query: 436 LL 441
L
Sbjct: 83 TL 84
>UniRef50_Q91GM8 Cluster: Late expression factor 11; n=5;
Nucleopolyhedrovirus|Rep: Late expression factor 11 -
Epiphyas postvittana nucleopolyhedrovirus (EppoMNPV)
Length = 126
Score = 82.2 bits (194), Expect = 1e-14
Identities = 43/66 (65%), Positives = 49/66 (74%)
Frame = +1
Query: 256 EAINTLKHTMNTEDVCAHMLDIVSFERIKEYIRANLGHFTVITDKCSKRKVCLHHKRIAR 435
E INTLK T ++V AHML+ S E IK+YIRANL FTVIT KCSKRKVC H KRIAR
Sbjct: 43 ETINTLKRTFKIKNVHAHMLEDDSGE-IKDYIRANLSRFTVITGKCSKRKVCHHDKRIAR 101
Query: 436 LLGIKK 453
L ++K
Sbjct: 102 TLHLEK 107
>UniRef50_A0EYS9 Cluster: Bv-e31; n=4; Nucleopolyhedrovirus|Rep:
Bv-e31 - Ecotropis obliqua NPV
Length = 243
Score = 78.6 bits (185), Expect = 1e-13
Identities = 33/52 (63%), Positives = 42/52 (80%)
Frame = +1
Query: 4 IVPLNKYFNYMNDKQLITYDYSNYIEFFSFVRSIKKRFDNRQLQDFFYATLK 159
IVPLN Y YMN+KQLITY+YSNY+EFF+FV+ +K FD+ +L +FF TLK
Sbjct: 161 IVPLNDYIAYMNEKQLITYEYSNYLEFFTFVKKVKTAFDDGRLNEFFLITLK 212
>UniRef50_Q8V5V6 Cluster: ORF33; n=3; Nucleopolyhedrovirus|Rep:
ORF33 - Helicoverpa zea SNPV
Length = 238
Score = 65.3 bits (152), Expect = 1e-09
Identities = 26/54 (48%), Positives = 37/54 (68%)
Frame = +1
Query: 4 IVPLNKYFNYMNDKQLITYDYSNYIEFFSFVRSIKKRFDNRQLQDFFYATLKKI 165
IVP+ YF YM + QL+TYD SNY++FF FV +K +D+ QL FF +L+ +
Sbjct: 145 IVPIKDYFQYMRESQLVTYDSSNYLDFFDFVEQVKIDYDSGQLNKFFTLSLRNV 198
>UniRef50_Q7T9V6 Cluster: ORF_59; n=9; Granulovirus|Rep: ORF_59 -
Adoxophyes orana granulovirus (AoGV)
Length = 225
Score = 59.3 bits (137), Expect = 8e-08
Identities = 24/52 (46%), Positives = 37/52 (71%)
Frame = +1
Query: 4 IVPLNKYFNYMNDKQLITYDYSNYIEFFSFVRSIKKRFDNRQLQDFFYATLK 159
++ L+KY YM ++QL TY YSNY+ FF +V S++K F N +L +FF+ L+
Sbjct: 160 LMNLSKYITYMENRQLSTYKYSNYLLFFDYVYSVQKMFSNFELDNFFFIDLQ 211
>UniRef50_Q0IL81 Cluster: ORF38; n=2; Nucleopolyhedrovirus|Rep:
ORF38 - Leucania separata nuclear polyhedrosis virus
(LsNPV)
Length = 261
Score = 57.6 bits (133), Expect = 2e-07
Identities = 25/53 (47%), Positives = 35/53 (66%), Gaps = 1/53 (1%)
Frame = +1
Query: 4 IVPLNKYFNYMNDKQLITYDYSNYIEFFSFVRSIKKRFDNRQLQD-FFYATLK 159
IVP YF YM + QL TY+ SNY++FF+FV ++K FD+ + FFY L+
Sbjct: 167 IVPTRDYFRYMREHQLTTYESSNYLDFFTFVENVKNTFDSSLAPEAFFYLELR 219
>UniRef50_Q9YMS9 Cluster: Late expression factor 11; n=1; Lymantria
dispar MNPV|Rep: Late expression factor 11 - Lymantria
dispar multicapsid nuclear polyhedrosis virus (LdMNPV)
Length = 187
Score = 48.8 bits (111), Expect = 1e-04
Identities = 32/83 (38%), Positives = 45/83 (54%), Gaps = 5/83 (6%)
Frame = +1
Query: 253 QEAINTLKHTMNTEDVCAHMLDIVSFERIKEYIRANLG-HFTVITDKCSKRK-VCLHHKR 426
+EAIN KH + + VCAH+ D SF +YIR NL F V+ D C +RK + H R
Sbjct: 37 REAINKRKHLGDVKGVCAHLFD-DSFSAQSDYIRENLATAFIVVGDNCRERKHLGQHAAR 95
Query: 427 IARLLGIKK--IYSS-RIQAGRF 486
R+ +K+ +Y AGR+
Sbjct: 96 FDRVFSLKRRTLYDEYHASAGRY 118
>UniRef50_Q80LT4 Cluster: Late expression factor 11; n=1; Adoxophyes
honmai NPV|Rep: Late expression factor 11 - Adoxophyes
honmai nucleopolyhedrovirus
Length = 118
Score = 46.0 bits (104), Expect = 8e-04
Identities = 24/67 (35%), Positives = 40/67 (59%), Gaps = 1/67 (1%)
Frame = +1
Query: 250 VQEAINTLKHTMNTEDVCAHMLDIVSFERIKEYIRANLGHFTVITD-KCSKRKVCLHHKR 426
V+E IN KH ++ AH+ D FE+ KEYIR L +++TD + +++++ LH K+
Sbjct: 31 VKETINKRKHDGEFCNITAHIFD-EGFEQQKEYIREKLSTASIVTDCRQNRKRLALHRKK 89
Query: 427 IARLLGI 447
I + I
Sbjct: 90 IESIFNI 96
>UniRef50_P11042 Cluster: Early 39 kDa protein; n=5;
Nucleopolyhedrovirus|Rep: Early 39 kDa protein -
Autographa californica nuclear polyhedrosis virus
(AcMNPV)
Length = 275
Score = 41.9 bits (94), Expect = 0.013
Identities = 27/49 (55%), Positives = 31/49 (63%)
Frame = +3
Query: 510 VNMPEQQSSTETAAVCKMKSC*NKLESSS*QQIPTWTS*IAIVNFLGKK 656
VN+PEQQS ETAAVCK + NKLESSS + IVNFL +K
Sbjct: 2 VNVPEQQSP-ETAAVCKNEKLLNKLESSSYNK-SNMDQLAVIVNFLERK 48
>UniRef50_Q91BI6 Cluster: Late expression factor 11; n=1; Spodoptera
litura NPV|Rep: Late expression factor 11 - Spodoptera
litura multicapsid nucleopolyhedrovirus (SpltMNPV)
Length = 144
Score = 40.3 bits (90), Expect = 0.040
Identities = 28/85 (32%), Positives = 43/85 (50%), Gaps = 4/85 (4%)
Frame = +1
Query: 250 VQEAINTLKHTMNTEDVCAHMLDIVSFERIKEYIRANLGHFTVITDKCSKRKVCLHHKRI 429
++E IN K N ++V AH+ D F+ I+ YIR +L +I +++C H RI
Sbjct: 19 MRELINDKKWNFNLKNVWAHVHDS-EFDTIRGYIRDHLDDAIIIHKDLRYKRLCHHRARI 77
Query: 430 ARLL----GIKKIYSSRIQAGRFKG 492
LL +KK Y + I R+ G
Sbjct: 78 ENLLKLNQSLKKEYENSI--SRYNG 100
>UniRef50_Q9J818 Cluster: Late expression factor 11; n=1; Spodoptera
exigua nuclear polyhedrosis virus (strain US)|Rep: Late
expression factor 11 - Spodoptera exigua nuclear
polyhedrosis virus (strain US) (SeMNPV)
Length = 104
Score = 37.9 bits (84), Expect = 0.21
Identities = 22/68 (32%), Positives = 38/68 (55%), Gaps = 2/68 (2%)
Frame = +1
Query: 250 VQEAINTLKHTMNTEDVCAHMLDIVSFERIKEYIRANLGH--FTVITDKCSKRKVCLHHK 423
V+E IN KH ++ +V AH+ + F+ EYIRAN+ TV ++ +++ H K
Sbjct: 12 VRETINKRKHEVDVSNVLAHIFEF-DFQEHVEYIRANIDKALITVGGEQPYCKRLSYHIK 70
Query: 424 RIARLLGI 447
RI ++ +
Sbjct: 71 RINKIFNL 78
>UniRef50_Q7RFK5 Cluster: Homo sapiens HT019; n=1; Plasmodium yoelii
yoelii|Rep: Homo sapiens HT019 - Plasmodium yoelii
yoelii
Length = 488
Score = 36.7 bits (81), Expect = 0.49
Identities = 30/131 (22%), Positives = 61/131 (46%), Gaps = 2/131 (1%)
Frame = +1
Query: 76 IEFFSFVRSIKKRFDNRQLQDFFYATLKKIDNNDAPQKLHALRRV*FGLLDPKRNTSAVQ 255
+E+FS I+K +N + + + + + +N+ K ++ F + PK +
Sbjct: 210 LEYFSV---IEKNLNNNNMNEIYISYMYGFSDNNITIKNATIKN--FIYIFPKLKNNIRT 264
Query: 256 EAINTLKHTMNTEDVCAHMLDIVSFERIKEYIRANLGHFTVITDKCSKRKVC-LHHK-RI 429
+A++ L + + D C + I+ +I +YI + + I + K +C +H K R+
Sbjct: 265 QALHILLNNLKERDYCIKINTIICIAKIADYILEDKQN---ILENVYKLGLCDMHDKIRV 321
Query: 430 ARLLGIKKIYS 462
A L IK Y+
Sbjct: 322 ATLQAIKATYN 332
>UniRef50_Q6QXJ5 Cluster: ORF52; n=3; Granulovirus|Rep: ORF52 -
Agrotis segetum granulosis virus (AsGV) (Agrotis
segetumgranulovirus)
Length = 106
Score = 35.5 bits (78), Expect = 1.1
Identities = 22/78 (28%), Positives = 38/78 (48%)
Frame = +1
Query: 220 LLDPKRNTSAVQEAINTLKHTMNTEDVCAHMLDIVSFERIKEYIRANLGHFTVITDKCSK 399
LL + V+E +N KH +TE+V AH+ D +F I E+I AN + +
Sbjct: 9 LLTKSHVYAIVRECVNFKKHNFDTENVLAHVED-SNFSVISEFINANADRIFIRQPQLD- 66
Query: 400 RKVCLHHKRIARLLGIKK 453
+ H +R++ + + K
Sbjct: 67 IPITPHRERLSYIFNLPK 84
>UniRef50_Q9PVE8 Cluster: Cytochrome P450 3A30; n=4;
Percomorpha|Rep: Cytochrome P450 3A30 - Fundulus
heteroclitus (Killifish) (Mummichog)
Length = 496
Score = 35.5 bits (78), Expect = 1.1
Identities = 24/83 (28%), Positives = 48/83 (57%), Gaps = 9/83 (10%)
Frame = +1
Query: 37 NDKQLITYDYSN----YIEFFSFVRSIKKRFD----NRQLQDFFYATLKKI-DNNDAPQK 189
N K+++ +D+ N + FF F+ I ++F+ + + DFFYA+L+KI N +A Q+
Sbjct: 205 NIKKMLKFDFLNPLFLAVAFFPFLGPILEKFELSFFPKSVTDFFYASLEKIKSNREASQQ 264
Query: 190 LHALRRV*FGLLDPKRNTSAVQE 258
+ + ++D ++N+ A Q+
Sbjct: 265 KSRVDFLQL-MIDSQKNSGAQQD 286
>UniRef50_A5IZQ1 Cluster: Lef-11; n=1; Spodoptera litura
granulovirus|Rep: Lef-11 - Spodoptera litura
granulovirus
Length = 98
Score = 34.7 bits (76), Expect = 2.0
Identities = 22/70 (31%), Positives = 34/70 (48%)
Frame = +1
Query: 244 SAVQEAINTLKHTMNTEDVCAHMLDIVSFERIKEYIRANLGHFTVITDKCSKRKVCLHHK 423
S ++E IN KH +TEDV AH ++ +FE + YI ++ + + H
Sbjct: 10 SILREVINYKKHNFDTEDVVAH-VEEAAFEELFAYILRCADKIFILQPDLYE-SIAPHKN 67
Query: 424 RIARLLGIKK 453
RI LL + K
Sbjct: 68 RIRHLLKLPK 77
>UniRef50_UPI00006CAEC2 Cluster: hypothetical protein TTHERM_00836570;
n=1; Tetrahymena thermophila SB210|Rep: hypothetical
protein TTHERM_00836570 - Tetrahymena thermophila SB210
Length = 986
Score = 34.3 bits (75), Expect = 2.6
Identities = 22/76 (28%), Positives = 39/76 (51%)
Frame = +2
Query: 419 TNELPGCWALKKYIHQEYKRVVSKVYKNQTGKHAGATIFYRNCGRVQNEKLLK*TGIELL 598
TN+ PG + +KY+ Y + V+ NQTG +T+ + N +L+ TG+E+
Sbjct: 823 TNKHPGKF-FRKYVDMAYYYTLG-VHVNQTGPLVYSTLMEHVLVSIDNNFVLRFTGLEIK 880
Query: 599 TTNSNMDQLNCYCKFS 646
+ S+++ L K S
Sbjct: 881 NSESHINILTVELKLS 896
>UniRef50_A7JHR1 Cluster: DNA primase; n=12; Francisella
tularensis|Rep: DNA primase - Francisella tularensis
subsp. novicida GA99-3549
Length = 605
Score = 34.3 bits (75), Expect = 2.6
Identities = 17/57 (29%), Positives = 35/57 (61%), Gaps = 5/57 (8%)
Frame = +1
Query: 46 QLITYDYSNYIEFF----SF-VRSIKKRFDNRQLQDFFYATLKKIDNNDAPQKLHAL 201
QL+T DY +Y E+F S+ +R+ +K++ + Q+ + LK+++N+ ++L L
Sbjct: 522 QLLTEDYPDYREYFFELLSYGIRNTQKKYAEDKYQEQMFVMLKRVENSSVKKRLKYL 578
>UniRef50_A0RN54 Cluster: GTP-binding protein; n=1; Campylobacter
fetus subsp. fetus 82-40|Rep: GTP-binding protein -
Campylobacter fetus subsp. fetus (strain 82-40)
Length = 692
Score = 34.3 bits (75), Expect = 2.6
Identities = 35/106 (33%), Positives = 51/106 (48%), Gaps = 5/106 (4%)
Frame = +1
Query: 61 DYSNYIEFFSFVRSIKKRFDNRQLQDFFYATLKK--IDNNDAPQKLHALRRV*F--GLLD 228
DYSN EF S ++SI R +R + D YA KK +D + L + R F D
Sbjct: 477 DYSNLNEF-STLKSISSRLKDRIVSDVKYANSKKQKVDFDRTNVILESGFRDMFIDFFRD 535
Query: 229 PKRNTSA-VQEAINTLKHTMNTEDVCAHMLDIVSFERIKEYIRANL 363
K S ++ LK +NT+D +I++ IKEY+ AN+
Sbjct: 536 FKHKISKDIESFYEILKLKLNTKD------EIINLPNIKEYLDANM 575
>UniRef50_A2BHJ8 Cluster: Novel protein; n=4; Danio rerio|Rep: Novel
protein - Danio rerio (Zebrafish) (Brachydanio rerio)
Length = 252
Score = 33.9 bits (74), Expect = 3.5
Identities = 18/32 (56%), Positives = 18/32 (56%)
Frame = -3
Query: 659 SFFSKKIYNSNLAGPCWNLLSRARFQFISTTF 564
SF SK I N GPCWN LS FIS TF
Sbjct: 198 SFLSKTILNLPFIGPCWNRLS----SFISQTF 225
>UniRef50_Q91EZ7 Cluster: ORF58 LEF-11; n=4; Granulovirus|Rep: ORF58
LEF-11 - Cydia pomonella granulosis virus (CpGV) (Cydia
pomonellagranulovirus)
Length = 134
Score = 33.9 bits (74), Expect = 3.5
Identities = 20/66 (30%), Positives = 32/66 (48%)
Frame = +1
Query: 250 VQEAINTLKHTMNTEDVCAHMLDIVSFERIKEYIRANLGHFTVITDKCSKRKVCLHHKRI 429
V+E IN K T +T+DV AH ++ FE I+++I + + K V H R+
Sbjct: 37 VREVINYRKSTNDTQDVTAH-VETPQFETIRQFINTHADRIVIKHFKRQDTAVAPHLSRL 95
Query: 430 ARLLGI 447
L +
Sbjct: 96 NYLFNL 101
>UniRef50_Q0BLM5 Cluster: Conserved protein; n=11; Francisella
tularensis|Rep: Conserved protein - Francisella
tularensis subsp. holarctica (strain OSU18)
Length = 1093
Score = 33.9 bits (74), Expect = 3.5
Identities = 27/105 (25%), Positives = 52/105 (49%), Gaps = 10/105 (9%)
Frame = +1
Query: 10 PLNKYFNYMNDKQLITYDYSNYIEFFSFVRS--IKKRFDN--RQLQDFF------YATLK 159
P++ YF NDK L + Y++Y F + + I++ + + + ++ + Y+ L
Sbjct: 776 PIDNYFKE-NDKYLESKSYADYKNIFKQLNNLIIEQGYSSTYKNIKQGYEPLQKVYSELS 834
Query: 160 KIDNNDAPQKLHALRRV*FGLLDPKRNTSAVQEAINTLKHTMNTE 294
KI+N+ L+ L + + T A+Q+AI L +T+N E
Sbjct: 835 KINNHQGNNNLYKLLKKHLDIAINTIKTIAIQDAITKLDNTVNIE 879
>UniRef50_A5Z483 Cluster: Putative uncharacterized protein; n=1;
Eubacterium ventriosum ATCC 27560|Rep: Putative
uncharacterized protein - Eubacterium ventriosum ATCC
27560
Length = 185
Score = 33.9 bits (74), Expect = 3.5
Identities = 21/57 (36%), Positives = 36/57 (63%), Gaps = 3/57 (5%)
Frame = -2
Query: 168 VYLF*S-GVEKVLQLPIIETLLDAAHKTKKFNVIAVIVRDQLFV--VHIIKIFVERH 7
VY F + G+E+V L +I+ L +TKK NV+ V ++D+L V H IK++ +++
Sbjct: 4 VYAFLADGMEEVEALMVIDLL----RRTKKLNVVTVSIKDELLVKSSHNIKLYADKN 56
>UniRef50_UPI00006CC894 Cluster: hypothetical protein
TTHERM_00289470; n=1; Tetrahymena thermophila SB210|Rep:
hypothetical protein TTHERM_00289470 - Tetrahymena
thermophila SB210
Length = 2011
Score = 33.5 bits (73), Expect = 4.6
Identities = 18/48 (37%), Positives = 29/48 (60%)
Frame = -1
Query: 592 LDSSLFQQLFILHTAAVSVEDCCSGMFTCLIFVNL*NDPLVFLMNIFF 449
LD+SL QQ F + TA + SG+ + L+++ L +DP + MN+ F
Sbjct: 52 LDTSLPQQSFTI-TAKFDSKQTISGVKSSLMYIALNSDPTTYFMNVQF 98
>UniRef50_Q4SK04 Cluster: Chromosome 10 SCAF14571, whole genome
shotgun sequence; n=2; Tetraodontidae|Rep: Chromosome 10
SCAF14571, whole genome shotgun sequence - Tetraodon
nigroviridis (Green puffer)
Length = 1382
Score = 33.1 bits (72), Expect = 6.1
Identities = 27/110 (24%), Positives = 48/110 (43%)
Frame = +1
Query: 97 RSIKKRFDNRQLQDFFYATLKKIDNNDAPQKLHALRRV*FGLLDPKRNTSAVQEAINTLK 276
R+ K R +NR L+ ++++ D A QKL LRR L + +N + E T K
Sbjct: 728 RAAKIRLENRILELEKHSSMMDCDYKQALQKLDELRRHKDQLTEEMKNMTLKIEQ-ETQK 786
Query: 277 HTMNTEDVCAHMLDIVSFERIKEYIRANLGHFTVITDKCSKRKVCLHHKR 426
++ D+ A + S ++ ++ + H I K+ L +R
Sbjct: 787 RSLTQNDLKAQNQQLSSLRTSEKQLKQEMNHLLDIKRSLEKQNQELRKER 836
>UniRef50_O63897 Cluster: RNA-dependent RNA polymerase; n=1;
Bryopsis cinicola|Rep: RNA-dependent RNA polymerase -
Bryopsis cinicola
Length = 824
Score = 33.1 bits (72), Expect = 6.1
Identities = 19/48 (39%), Positives = 25/48 (52%)
Frame = +1
Query: 313 LDIVSFERIKEYIRANLGHFTVITDKCSKRKVCLHHKRIARLLGIKKI 456
L I +RI + AN GH+T + KR C+H IA+ L KKI
Sbjct: 222 LKIDDLDRISVNLNANSGHYTSLLFGSKKRDSCVHSNLIAKEL-FKKI 268
>UniRef50_Q86JH7 Cluster: Similar to Arabidopsis thaliana (Mouse-ear
cress). F8L10.1 protein; n=2; Dictyostelium
discoideum|Rep: Similar to Arabidopsis thaliana
(Mouse-ear cress). F8L10.1 protein - Dictyostelium
discoideum (Slime mold)
Length = 908
Score = 33.1 bits (72), Expect = 6.1
Identities = 19/67 (28%), Positives = 36/67 (53%)
Frame = +1
Query: 88 SFVRSIKKRFDNRQLQDFFYATLKKIDNNDAPQKLHALRRV*FGLLDPKRNTSAVQEAIN 267
SFV + ++++ ++ F LK+++N KLH L F L+D K+N ++ N
Sbjct: 769 SFVTDYFSKLNDQKYEEMFQLGLKELEN-----KLHKLE---FQLIDCKKNRDKFKDVYN 820
Query: 268 TLKHTMN 288
+K ++N
Sbjct: 821 RMKQSLN 827
>UniRef50_Q1ZRK1 Cluster: O-antigen chain length determinant
protein; n=1; Vibrio angustum S14|Rep: O-antigen chain
length determinant protein - Vibrio angustum S14
Length = 347
Score = 32.7 bits (71), Expect = 8.0
Identities = 22/87 (25%), Positives = 39/87 (44%), Gaps = 1/87 (1%)
Frame = +1
Query: 64 YSNYIEFFSFVRSIKKRFDN-RQLQDFFYATLKKIDNNDAPQKLHALRRV*FGLLDPKRN 240
Y+N +EF +SIK F N ++ DF +K+I++ L + + ++
Sbjct: 110 YNNKLEFLEGNKSIKSDFINEKEKHDFLQRFIKRINSEKVGNDSQVLYSLSYTATSSIKS 169
Query: 241 TSAVQEAINTLKHTMNTEDVCAHMLDI 321
+ E IN + +N E V + DI
Sbjct: 170 HDLLSEYINFINEKVNKEVVSSLKSDI 196
>UniRef50_A7LRV9 Cluster: Putative uncharacterized protein; n=1;
Bacteroides ovatus ATCC 8483|Rep: Putative
uncharacterized protein - Bacteroides ovatus ATCC 8483
Length = 1023
Score = 32.7 bits (71), Expect = 8.0
Identities = 19/51 (37%), Positives = 28/51 (54%)
Frame = +2
Query: 404 RCVFITNELPGCWALKKYIHQEYKRVVSKVYKNQTGKHAGATIFYRNCGRV 556
RC I+ +LPGC A+ Y++ + RV+ NQ+ K FY N GR+
Sbjct: 277 RC--ISKKLPGCAAIG-YVYDKADRVILSQNGNQSQKKEWTFTFYDNQGRL 324
>UniRef50_A6DDS4 Cluster: Putative uncharacterized protein; n=1;
Caminibacter mediatlanticus TB-2|Rep: Putative
uncharacterized protein - Caminibacter mediatlanticus
TB-2
Length = 107
Score = 32.7 bits (71), Expect = 8.0
Identities = 18/65 (27%), Positives = 35/65 (53%), Gaps = 1/65 (1%)
Frame = +1
Query: 7 VPLNKYFNYMN-DKQLITYDYSNYIEFFSFVRSIKKRFDNRQLQDFFYATLKKIDNNDAP 183
V L +Y++Y+ DK+ + + ++ S+KK FD LQD ++ + + DN
Sbjct: 40 VKLKRYYHYIIVDKKQDIKPFFRALRNGGYIISLKK-FDEEYLQDIGFSAISEFDNLQII 98
Query: 184 QKLHA 198
+K+H+
Sbjct: 99 KKVHS 103
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 647,345,716
Number of Sequences: 1657284
Number of extensions: 12997814
Number of successful extensions: 34734
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 33460
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 34708
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 50000004659
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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