Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120389.Seq
         (661 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggeri...    27   0.10 
AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory recept...    24   1.3  
AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory recept...    24   1.3  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    21   6.8  
AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory recept...    21   6.8  
AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembran...    21   6.8  
AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembran...    21   6.8  

>EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggering
           hormone receptorisoform B protein.
          Length = 451

 Score = 27.5 bits (58), Expect = 0.10
 Identities = 18/56 (32%), Positives = 30/56 (53%)
 Frame = -2

Query: 273 ERVDGFLNSACISLRVKQSELHPPKCVQFLGGIVVVYLF*SGVEKVLQLPIIETLL 106
           E VDG +   C SL     +  P  CV FLG I++ ++F   +  ++ + I +TL+
Sbjct: 215 EYVDGSIVFVCFSL---VEDTLP--CVFFLGSILIFFIFPLAILIIVYILIAKTLM 265


>AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory receptor
           candidate 56 protein.
          Length = 358

 Score = 23.8 bits (49), Expect = 1.3
 Identities = 11/29 (37%), Positives = 15/29 (51%)
 Frame = -1

Query: 589 DSSLFQQLFILHTAAVSVEDCCSGMFTCL 503
           DS L Q+L        S+  CCS +F C+
Sbjct: 81  DSDLQQKLRYFEEVFSSLLSCCSVIFGCI 109


>AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory receptor
           candidate 21 protein.
          Length = 386

 Score = 23.8 bits (49), Expect = 1.3
 Identities = 11/29 (37%), Positives = 15/29 (51%)
 Frame = -1

Query: 589 DSSLFQQLFILHTAAVSVEDCCSGMFTCL 503
           DS L Q+L        S+  CCS +F C+
Sbjct: 81  DSDLQQKLRYFEEVFSSLLSCCSVIFGCI 109


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 21.4 bits (43), Expect = 6.8
 Identities = 5/22 (22%), Positives = 13/22 (59%)
 Frame = -2

Query: 621 WSMLEFVVKSSIPVYFNNFSFC 556
           W+ + ++  +S+P  F++   C
Sbjct: 277 WTRIAYMALASVPFIFDSIHLC 298


>AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory receptor
           candidate 3 protein.
          Length = 398

 Score = 21.4 bits (43), Expect = 6.8
 Identities = 5/22 (22%), Positives = 13/22 (59%)
 Frame = -2

Query: 621 WSMLEFVVKSSIPVYFNNFSFC 556
           W+ + ++  +S+P  F++   C
Sbjct: 295 WTRIAYMALASVPFIFDSIHLC 316


>AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembrane
           transporter protein.
          Length = 669

 Score = 21.4 bits (43), Expect = 6.8
 Identities = 9/16 (56%), Positives = 11/16 (68%)
 Frame = -2

Query: 606 FVVKSSIPVYFNNFSF 559
           F+  SSIP+YF   SF
Sbjct: 575 FLNVSSIPIYFKWLSF 590


>AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembrane
           transporter white protein.
          Length = 669

 Score = 21.4 bits (43), Expect = 6.8
 Identities = 9/16 (56%), Positives = 11/16 (68%)
 Frame = -2

Query: 606 FVVKSSIPVYFNNFSF 559
           F+  SSIP+YF   SF
Sbjct: 575 FLNVSSIPIYFKWLSF 590


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 160,384
Number of Sequences: 336
Number of extensions: 3536
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17073220
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)