Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120389.Seq
         (661 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY146731-1|AAO12091.1|  150|Anopheles gambiae odorant-binding pr...    25   2.8  
AF437887-1|AAL84182.1|  150|Anopheles gambiae odorant binding pr...    25   2.8  
AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein p...    24   3.7  
AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.            24   4.9  
AY578812-1|AAT07317.1|  932|Anopheles gambiae wishful thinking p...    23   6.5  
AY873992-1|AAW71999.1|  259|Anopheles gambiae nanos protein.           23   8.5  
AY583530-1|AAS93544.1|  260|Anopheles gambiae NOS protein protein.     23   8.5  
AJ439060-17|CAD27768.1|  568|Anopheles gambiae putative chitin b...    23   8.5  

>AY146731-1|AAO12091.1|  150|Anopheles gambiae odorant-binding
           protein AgamOBP4 protein.
          Length = 150

 Score = 24.6 bits (51), Expect = 2.8
 Identities = 6/13 (46%), Positives = 11/13 (84%)
 Frame = -2

Query: 297 VFCIHCVLERVDG 259
           +FC+ C++E +DG
Sbjct: 13  LFCVQCLIEHIDG 25


>AF437887-1|AAL84182.1|  150|Anopheles gambiae odorant binding
           protein protein.
          Length = 150

 Score = 24.6 bits (51), Expect = 2.8
 Identities = 6/13 (46%), Positives = 11/13 (84%)
 Frame = -2

Query: 297 VFCIHCVLERVDG 259
           +FC+ C++E +DG
Sbjct: 13  LFCVQCLIEHIDG 25


>AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein
            protein.
          Length = 3325

 Score = 24.2 bits (50), Expect = 3.7
 Identities = 9/15 (60%), Positives = 10/15 (66%)
 Frame = -2

Query: 621  WSMLEFVVKSSIPVY 577
            WS LEFVV    P+Y
Sbjct: 2884 WSFLEFVVTQRTPLY 2898


>AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.
          Length = 3361

 Score = 23.8 bits (49), Expect = 4.9
 Identities = 11/34 (32%), Positives = 17/34 (50%)
 Frame = +2

Query: 395  LSVRCVFITNELPGCWALKKYIHQEYKRVVSKVY 496
            L  R  F T  + G    +  ++ + KRV+ KVY
Sbjct: 2015 LRYRSAFATRRIGGDQMTEYLVYDQSKRVLKKVY 2048


>AY578812-1|AAT07317.1|  932|Anopheles gambiae wishful thinking
           protein.
          Length = 932

 Score = 23.4 bits (48), Expect = 6.5
 Identities = 8/12 (66%), Positives = 9/12 (75%)
 Frame = +2

Query: 173 TMPPKNCTHLGG 208
           TMPPK C+H  G
Sbjct: 556 TMPPKGCSHDDG 567


>AY873992-1|AAW71999.1|  259|Anopheles gambiae nanos protein.
          Length = 259

 Score = 23.0 bits (47), Expect = 8.5
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = +3

Query: 513 NMPEQQSSTETAAVCKMKS 569
           N P+QQS+T     C+ KS
Sbjct: 131 NQPKQQSTTRPLRKCRNKS 149


>AY583530-1|AAS93544.1|  260|Anopheles gambiae NOS protein protein.
          Length = 260

 Score = 23.0 bits (47), Expect = 8.5
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = +3

Query: 513 NMPEQQSSTETAAVCKMKS 569
           N P+QQS+T     C+ KS
Sbjct: 132 NQPKQQSTTRPLRKCRNKS 150


>AJ439060-17|CAD27768.1|  568|Anopheles gambiae putative chitin
           binding protein protein.
          Length = 568

 Score = 23.0 bits (47), Expect = 8.5
 Identities = 19/70 (27%), Positives = 32/70 (45%), Gaps = 1/70 (1%)
 Frame = +3

Query: 144 LRHSKKDRQQRCP-PKIART*AGVIRTA*PEAKYKRCSGSHQHAQAHNEYRRRLRAHVGH 320
           ++ + + RQQ    P+  R  AG +RT       +R        +  ++ RRR   + GH
Sbjct: 297 IKEAIRVRQQELRGPEAVREAAGRLRTGPVPGAAERHRRRRPPPRRRHD-RRRYPTNAGH 355

Query: 321 RVV*AYKRIY 350
           +V+ A K  Y
Sbjct: 356 KVMNAPKEYY 365


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 710,803
Number of Sequences: 2352
Number of extensions: 15465
Number of successful extensions: 20
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 65650335
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)