Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120389.Seq
         (661 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT025148-1|ABE73318.1|  270|Drosophila melanogaster IP04354p pro...    30   3.2  
BT001899-1|AAN71688.1|  773|Drosophila melanogaster SD20577p pro...    29   5.6  
AE014297-2554|AAF55575.2| 1784|Drosophila melanogaster CG31224-P...    29   5.6  
AE014298-2800|AAF48917.3|  380|Drosophila melanogaster CG7440-PA...    28   9.8  

>BT025148-1|ABE73318.1|  270|Drosophila melanogaster IP04354p
           protein.
          Length = 270

 Score = 29.9 bits (64), Expect = 3.2
 Identities = 15/31 (48%), Positives = 17/31 (54%)
 Frame = -3

Query: 620 GPCWNLLSRARFQFISTTFHFAHGRSFCRRL 528
           G CW L  R R       FH AHGR+ CRR+
Sbjct: 134 GDCWILCPRPRL------FHPAHGRARCRRI 158


>BT001899-1|AAN71688.1|  773|Drosophila melanogaster SD20577p
           protein.
          Length = 773

 Score = 29.1 bits (62), Expect = 5.6
 Identities = 11/30 (36%), Positives = 16/30 (53%)
 Frame = -3

Query: 560 FAHGRSFCRRLLLRHVYLFDFCKPLKRPAC 471
           F H  S  R + L H   FD+ +P++ P C
Sbjct: 576 FVHANSLRRHIRLAHSDKFDYAEPMECPMC 605


>AE014297-2554|AAF55575.2| 1784|Drosophila melanogaster CG31224-PA
            protein.
          Length = 1784

 Score = 29.1 bits (62), Expect = 5.6
 Identities = 11/30 (36%), Positives = 16/30 (53%)
 Frame = -3

Query: 560  FAHGRSFCRRLLLRHVYLFDFCKPLKRPAC 471
            F H  S  R + L H   FD+ +P++ P C
Sbjct: 1587 FVHANSLRRHIRLAHSDKFDYAEPMECPMC 1616


>AE014298-2800|AAF48917.3|  380|Drosophila melanogaster CG7440-PA,
           isoform A protein.
          Length = 380

 Score = 28.3 bits (60), Expect = 9.8
 Identities = 10/17 (58%), Positives = 13/17 (76%)
 Frame = +1

Query: 25  FNYMNDKQLITYDYSNY 75
           F+Y++ KQL  YDY NY
Sbjct: 331 FHYVHSKQLYVYDYFNY 347


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,068,640
Number of Sequences: 53049
Number of extensions: 648963
Number of successful extensions: 1822
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1756
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1822
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2827453950
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)