Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV120389.Seq
(661 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z73423-2|CAA97774.1| 290|Caenorhabditis elegans Hypothetical pr... 29 2.9
AL031627-18|CAA20951.1| 347|Caenorhabditis elegans Hypothetical... 29 3.9
Z95123-1|CAD59158.1| 83|Caenorhabditis elegans Hypothetical pr... 28 5.1
Z79695-2|CAB01971.2| 1008|Caenorhabditis elegans Hypothetical pr... 28 5.1
Z37092-3|CAA85454.1| 266|Caenorhabditis elegans Hypothetical pr... 28 6.8
Z82093-9|CAD27620.1| 2920|Caenorhabditis elegans Hypothetical pr... 27 8.9
Z82064-3|CAD27611.1| 2920|Caenorhabditis elegans Hypothetical pr... 27 8.9
Z82064-1|CAB61036.1| 1223|Caenorhabditis elegans Hypothetical pr... 27 8.9
Z68222-10|CAA92505.3| 1701|Caenorhabditis elegans Hypothetical p... 27 8.9
Z68218-5|CAA92475.3| 1701|Caenorhabditis elegans Hypothetical pr... 27 8.9
AL032638-2|CAD27619.1| 2920|Caenorhabditis elegans Hypothetical ... 27 8.9
AJ307058-1|CAC38842.1| 2920|Caenorhabditis elegans HMR-1B protei... 27 8.9
AF016854-1|AAB94553.1| 1223|Caenorhabditis elegans HMR-1 protein. 27 8.9
>Z73423-2|CAA97774.1| 290|Caenorhabditis elegans Hypothetical
protein C03A3.3 protein.
Length = 290
Score = 29.1 bits (62), Expect = 2.9
Identities = 15/51 (29%), Positives = 27/51 (52%)
Frame = +1
Query: 31 YMNDKQLITYDYSNYIEFFSFVRSIKKRFDNRQLQDFFYATLKKIDNNDAP 183
Y D + TY Y++ ++ + VRSI K ++ ++ + A+ DNN P
Sbjct: 178 YRFDDIMFTYQYTDIRQYENSVRSILKFVKSQDVEVRYSASKNDTDNNCLP 228
>AL031627-18|CAA20951.1| 347|Caenorhabditis elegans Hypothetical
protein Y102A5C.29 protein.
Length = 347
Score = 28.7 bits (61), Expect = 3.9
Identities = 15/34 (44%), Positives = 22/34 (64%)
Frame = -3
Query: 320 MSNMCAQTSSVFIVCLSVLMAS*TALVFRFGSSS 219
MSN A T +F++CL VL AS T ++R ++S
Sbjct: 89 MSNQMALTIWIFLLCL-VLPASITCFIYRHNAAS 121
>Z95123-1|CAD59158.1| 83|Caenorhabditis elegans Hypothetical
protein VZK822L.2 protein.
Length = 83
Score = 28.3 bits (60), Expect = 5.1
Identities = 11/34 (32%), Positives = 19/34 (55%)
Frame = -2
Query: 261 GFLNSACISLRVKQSELHPPKCVQFLGGIVVVYL 160
G ++ CI + + QS L PP+C G +++ L
Sbjct: 16 GGMSIVCILIHIIQSTLRPPQCCHNSSGTLIIGL 49
>Z79695-2|CAB01971.2| 1008|Caenorhabditis elegans Hypothetical
protein F27D4.6 protein.
Length = 1008
Score = 28.3 bits (60), Expect = 5.1
Identities = 13/30 (43%), Positives = 17/30 (56%), Gaps = 1/30 (3%)
Frame = +1
Query: 4 IVPLNKYFNYMNDKQLITYDY-SNYIEFFS 90
I+P +KY NY+ K +DY N E FS
Sbjct: 498 IIPASKYNNYLQGKYAFEFDYKENRSEVFS 527
>Z37092-3|CAA85454.1| 266|Caenorhabditis elegans Hypothetical
protein F44F4.3 protein.
Length = 266
Score = 27.9 bits (59), Expect = 6.8
Identities = 11/35 (31%), Positives = 22/35 (62%)
Frame = +3
Query: 501 IKQVNMPEQQSSTETAAVCKMKSC*NKLESSS*QQ 605
+K V + E Q E +++CKM++ +K+E + Q+
Sbjct: 67 VKDVTLEEIQGKRELSSICKMEAYTSKIEDKTKQR 101
>Z82093-9|CAD27620.1| 2920|Caenorhabditis elegans Hypothetical protein
W02B9.1b protein.
Length = 2920
Score = 27.5 bits (58), Expect = 8.9
Identities = 11/36 (30%), Positives = 21/36 (58%)
Frame = +1
Query: 226 DPKRNTSAVQEAINTLKHTMNTEDVCAHMLDIVSFE 333
DPKR + Q+ + HT++ ED+ + L I +++
Sbjct: 1813 DPKRQFTIDQDGTLRVAHTLDREDIAVYNLIIEAYD 1848
>Z82064-3|CAD27611.1| 2920|Caenorhabditis elegans Hypothetical protein
W02B9.1b protein.
Length = 2920
Score = 27.5 bits (58), Expect = 8.9
Identities = 11/36 (30%), Positives = 21/36 (58%)
Frame = +1
Query: 226 DPKRNTSAVQEAINTLKHTMNTEDVCAHMLDIVSFE 333
DPKR + Q+ + HT++ ED+ + L I +++
Sbjct: 1813 DPKRQFTIDQDGTLRVAHTLDREDIAVYNLIIEAYD 1848
>Z82064-1|CAB61036.1| 1223|Caenorhabditis elegans Hypothetical
protein W02B9.1a protein.
Length = 1223
Score = 27.5 bits (58), Expect = 8.9
Identities = 11/36 (30%), Positives = 21/36 (58%)
Frame = +1
Query: 226 DPKRNTSAVQEAINTLKHTMNTEDVCAHMLDIVSFE 333
DPKR + Q+ + HT++ ED+ + L I +++
Sbjct: 116 DPKRQFTIDQDGTLRVAHTLDREDIAVYNLIIEAYD 151
>Z68222-10|CAA92505.3| 1701|Caenorhabditis elegans Hypothetical
protein ZK1251.9 protein.
Length = 1701
Score = 27.5 bits (58), Expect = 8.9
Identities = 17/55 (30%), Positives = 25/55 (45%)
Frame = +1
Query: 139 FFYATLKKIDNNDAPQKLHALRRV*FGLLDPKRNTSAVQEAINTLKHTMNTEDVC 303
F+ A L++ D D P+KLH L+ + +E I+T T T VC
Sbjct: 464 FYKAILRRFDQYDGPRKLHNYIAT-LTLMQNNEDVELTEEQIHT--STQCTRGVC 515
>Z68218-5|CAA92475.3| 1701|Caenorhabditis elegans Hypothetical
protein ZK1251.9 protein.
Length = 1701
Score = 27.5 bits (58), Expect = 8.9
Identities = 17/55 (30%), Positives = 25/55 (45%)
Frame = +1
Query: 139 FFYATLKKIDNNDAPQKLHALRRV*FGLLDPKRNTSAVQEAINTLKHTMNTEDVC 303
F+ A L++ D D P+KLH L+ + +E I+T T T VC
Sbjct: 464 FYKAILRRFDQYDGPRKLHNYIAT-LTLMQNNEDVELTEEQIHT--STQCTRGVC 515
>AL032638-2|CAD27619.1| 2920|Caenorhabditis elegans Hypothetical
protein W02B9.1b protein.
Length = 2920
Score = 27.5 bits (58), Expect = 8.9
Identities = 11/36 (30%), Positives = 21/36 (58%)
Frame = +1
Query: 226 DPKRNTSAVQEAINTLKHTMNTEDVCAHMLDIVSFE 333
DPKR + Q+ + HT++ ED+ + L I +++
Sbjct: 1813 DPKRQFTIDQDGTLRVAHTLDREDIAVYNLIIEAYD 1848
>AJ307058-1|CAC38842.1| 2920|Caenorhabditis elegans HMR-1B protein
protein.
Length = 2920
Score = 27.5 bits (58), Expect = 8.9
Identities = 11/36 (30%), Positives = 21/36 (58%)
Frame = +1
Query: 226 DPKRNTSAVQEAINTLKHTMNTEDVCAHMLDIVSFE 333
DPKR + Q+ + HT++ ED+ + L I +++
Sbjct: 1813 DPKRQFTIDQDGTLRVAHTLDREDIAVYNLIIEAYD 1848
>AF016854-1|AAB94553.1| 1223|Caenorhabditis elegans HMR-1 protein.
Length = 1223
Score = 27.5 bits (58), Expect = 8.9
Identities = 11/36 (30%), Positives = 21/36 (58%)
Frame = +1
Query: 226 DPKRNTSAVQEAINTLKHTMNTEDVCAHMLDIVSFE 333
DPKR + Q+ + HT++ ED+ + L I +++
Sbjct: 116 DPKRQFTIDQDGTLRVAHTLDREDIAVYNLIIEAYD 151
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,695,325
Number of Sequences: 27780
Number of extensions: 340526
Number of successful extensions: 928
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 887
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 925
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1476380920
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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