Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120387.Seq
         (709 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    23   1.8  
DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          22   5.6  
AM292349-1|CAL23161.1|  248|Tribolium castaneum gustatory recept...    22   5.6  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    21   9.8  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    21   9.8  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    21   9.8  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    21   9.8  

>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 11/33 (33%), Positives = 17/33 (51%), Gaps = 2/33 (6%)
 Frame = -3

Query: 623  SSWRAPERPRYSAINVAS--RLSRTCSTNTSPS 531
            SSW+ P +P Y   +  +  +   T ST T P+
Sbjct: 1164 SSWQKPTKPSYRPPSTTNHWQTKTTTSTTTRPT 1196


>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 21.8 bits (44), Expect = 5.6
 Identities = 9/32 (28%), Positives = 13/32 (40%)
 Frame = +3

Query: 75  LGVKLESLMETIHTEFRNSHPLPGSYAPRKGA 170
           LG  L+ +   +    R      G+Y P K A
Sbjct: 178 LGKDLQGISAPVEAHLRKGRGAIGAYGPEKSA 209


>AM292349-1|CAL23161.1|  248|Tribolium castaneum gustatory receptor
           candidate 28 protein.
          Length = 248

 Score = 21.8 bits (44), Expect = 5.6
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = -3

Query: 170 GSLPWSIRSRQWVTVSK 120
           GS+ + I S+ WVT+ K
Sbjct: 128 GSIQFIIISKHWVTIMK 144


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 21.0 bits (42), Expect = 9.8
 Identities = 8/22 (36%), Positives = 12/22 (54%)
 Frame = -2

Query: 231 LFFQSLPCTIGHRL*NEQHRWL 166
           LFF+S P    +   + QH W+
Sbjct: 445 LFFESPPVVFLNDFISHQHAWI 466


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 21.0 bits (42), Expect = 9.8
 Identities = 8/22 (36%), Positives = 12/22 (54%)
 Frame = -2

Query: 231 LFFQSLPCTIGHRL*NEQHRWL 166
           LFF+S P    +   + QH W+
Sbjct: 445 LFFESPPVVFLNDFISHQHAWI 466


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 21.0 bits (42), Expect = 9.8
 Identities = 8/22 (36%), Positives = 12/22 (54%)
 Frame = -2

Query: 231 LFFQSLPCTIGHRL*NEQHRWL 166
           LFF+S P    +   + QH W+
Sbjct: 445 LFFESPPVVFLNDFISHQHAWI 466


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 21.0 bits (42), Expect = 9.8
 Identities = 8/22 (36%), Positives = 12/22 (54%)
 Frame = -2

Query: 231 LFFQSLPCTIGHRL*NEQHRWL 166
           LFF+S P    +   + QH W+
Sbjct: 445 LFFESPPVVFLNDFISHQHAWI 466


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 181,159
Number of Sequences: 336
Number of extensions: 4265
Number of successful extensions: 10
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18738900
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)