Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV120387.Seq
(709 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_23596| Best HMM Match : No HMM Matches (HMM E-Value=.) 86 2e-17
SB_9677| Best HMM Match : TUDOR (HMM E-Value=0.0018) 83 2e-16
SB_36998| Best HMM Match : TUDOR (HMM E-Value=0) 52 3e-07
SB_51217| Best HMM Match : TUDOR (HMM E-Value=0) 46 3e-05
SB_42677| Best HMM Match : TUDOR (HMM E-Value=0) 45 5e-05
SB_35821| Best HMM Match : TUDOR (HMM E-Value=0) 44 9e-05
SB_4587| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 9e-05
SB_18985| Best HMM Match : TUDOR (HMM E-Value=8.3e-37) 40 0.003
SB_27288| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.008
SB_48231| Best HMM Match : TUDOR (HMM E-Value=1.9e-28) 35 0.056
SB_33074| Best HMM Match : TUDOR (HMM E-Value=1.9e-30) 34 0.098
SB_39313| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.098
SB_13392| Best HMM Match : hATC (HMM E-Value=0.16) 31 0.69
SB_1948| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.5
SB_53352| Best HMM Match : Collagen (HMM E-Value=0.11) 28 8.5
SB_12105| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.5
>SB_23596| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 830
Score = 86.2 bits (204), Expect = 2e-17
Identities = 40/82 (48%), Positives = 55/82 (67%)
Frame = +3
Query: 12 YDRVVITEVTPEGHFYAQNVDLGVKLESLMETIHTEFRNSHPLPGSYAPRKGAICAARFT 191
Y ++++TE E FYAQ V+ G +LE LM ++TE +S PLPGS+ RKG +CAARF
Sbjct: 476 YKKIIVTEFKNELTFYAQLVETGPQLEQLMTDLNTELGSSPPLPGSFTARKGEMCAARF- 534
Query: 192 ADDQWYRAKIEKITDNRQVQVY 257
D+ WYRAKIE + +V V+
Sbjct: 535 VDNSWYRAKIESVKSPSEVSVF 556
Score = 38.7 bits (86), Expect = 0.005
Identities = 23/66 (34%), Positives = 32/66 (48%), Gaps = 1/66 (1%)
Frame = +1
Query: 511 LGKNLIKDGLVLVEQVRDSRLATLMAEYR-GRSGARQELATSTCGGTVTSPRTMQWNSGC 687
+GK+L+ DG VLVE+ ++ RL +M EYR + AR G T N GC
Sbjct: 659 VGKSLVADGFVLVEKRKEKRLQKMMEEYRKAQDTARTTRLNLWRYGDFTEDDARTQNGGC 718
Query: 688 VASCTP 705
+P
Sbjct: 719 EFFSSP 724
Score = 34.3 bits (75), Expect = 0.098
Identities = 13/19 (68%), Positives = 15/19 (78%)
Frame = +2
Query: 257 YIDYGNRETLDITRLAALP 313
Y+DYGNRE L +TRL LP
Sbjct: 557 YVDYGNREVLPVTRLCPLP 575
>SB_9677| Best HMM Match : TUDOR (HMM E-Value=0.0018)
Length = 84
Score = 83.0 bits (196), Expect = 2e-16
Identities = 39/79 (49%), Positives = 53/79 (67%)
Frame = +3
Query: 21 VVITEVTPEGHFYAQNVDLGVKLESLMETIHTEFRNSHPLPGSYAPRKGAICAARFTADD 200
+++TE E FYAQ V+ G +LE LM ++TE +S PLPGS+ RKG +CAARF D+
Sbjct: 1 IIVTEFKNELTFYAQLVETGPQLEQLMTDLNTELGSSPPLPGSFTARKGEMCAARF-VDN 59
Query: 201 QWYRAKIEKITDNRQVQVY 257
WYRAKIE + +V V+
Sbjct: 60 SWYRAKIESVKSPSEVSVF 78
>SB_36998| Best HMM Match : TUDOR (HMM E-Value=0)
Length = 2538
Score = 52.4 bits (120), Expect = 3e-07
Identities = 25/81 (30%), Positives = 41/81 (50%)
Frame = +3
Query: 12 YDRVVITEVTPEGHFYAQNVDLGVKLESLMETIHTEFRNSHPLPGSYAPRKGAICAARFT 191
Y+ V+++ F+ Q + +L+S+M +H NS P +PR G C A F+
Sbjct: 670 YEDVLVSYSESPAVFWCQLLKHKAELDSIMNALHEYCANSGPKDNINSPRVGTPCCAMFS 729
Query: 192 ADDQWYRAKIEKITDNRQVQV 254
D+ WYR + +T QV+V
Sbjct: 730 VDEGWYRGLVTGVTRANQVEV 750
Score = 46.8 bits (106), Expect = 2e-05
Identities = 22/73 (30%), Positives = 35/73 (47%), Gaps = 1/73 (1%)
Frame = +3
Query: 24 VITEVTPEGHFYAQNVDLGVKLESLMETIHTEFRN-SHPLPGSYAPRKGAICAARFTADD 200
++T +T FY Q+ L+ +M+ + +R P+ G C ARF+ DD
Sbjct: 1054 LVTSITSSSKFYLQDSQSASALDEVMDLLEGHYRALGEGEEALKKPQVGQFCVARFSEDD 1113
Query: 201 QWYRAKIEKITDN 239
WYRA + K+ N
Sbjct: 1114 GWYRAVVTKVHGN 1126
Score = 46.4 bits (105), Expect = 2e-05
Identities = 27/80 (33%), Positives = 40/80 (50%), Gaps = 1/80 (1%)
Frame = +3
Query: 18 RVVITEVTPEGHFYAQNVDLGVKLESLMETIHTEF-RNSHPLPGSYAPRKGAICAARFTA 194
+ +IT FY Q + KLE LM I + R S P G IC A+F+
Sbjct: 462 KCLITACQSPSKFYIQLFSMASKLEKLMMDIENYYDRLSADDEWLACPVVGDICCAKFSE 521
Query: 195 DDQWYRAKIEKITDNRQVQV 254
DD WYRA + ++ ++++V V
Sbjct: 522 DDCWYRAIVTEVQESKKVGV 541
Score = 44.8 bits (101), Expect = 7e-05
Identities = 26/60 (43%), Positives = 34/60 (56%)
Frame = +3
Query: 57 YAQNVDLGVKLESLMETIHTEFRNSHPLPGSYAPRKGAICAARFTADDQWYRAKIEKITD 236
+ Q V KLE+LM I E PLP S + G C A+FT DD WYRA+I+++ D
Sbjct: 1684 WLQPVSTAGKLENLMAAI-AESPPCSPLPSSLSA--GWPCLAQFTDDDAWYRAEIQEVKD 1740
Score = 44.0 bits (99), Expect = 1e-04
Identities = 23/76 (30%), Positives = 36/76 (47%), Gaps = 1/76 (1%)
Frame = +3
Query: 15 DRVVITEVTPEGHFYAQNVDLGVKLESLMETIHTEFRNSHPLPGSYAPRK-GAICAARFT 191
+ V +T V FY Q + +L+ +M + + K G CAAR+T
Sbjct: 869 ENVCVTSVVGVTQFYCQVMKASEQLDRMMVALDDHYNTLADSQEVLTEVKPGVCCAARYT 928
Query: 192 ADDQWYRAKIEKITDN 239
DD WYRA+I +++ N
Sbjct: 929 EDDSWYRARILEVSRN 944
Score = 38.7 bits (86), Expect = 0.005
Identities = 18/46 (39%), Positives = 26/46 (56%)
Frame = +3
Query: 84 KLESLMETIHTEFRNSHPLPGSYAPRKGAICAARFTADDQWYRAKI 221
+LE+LM I T + P G C A+++AD+QWYRA+I
Sbjct: 2468 QLEALMSEIGTAYSELDDGLSIMEPVPGQACCAQYSADEQWYRAEI 2513
Score = 38.3 bits (85), Expect = 0.006
Identities = 23/51 (45%), Positives = 27/51 (52%)
Frame = +3
Query: 87 LESLMETIHTEFRNSHPLPGSYAPRKGAICAARFTADDQWYRAKIEKITDN 239
LE LM TI E S P+ S G C ++FT DD WYRA+I DN
Sbjct: 2261 LEELMATI-AERHPSEPMQASLLV-PGQPCLSQFTEDDGWYRAEILTTKDN 2309
Score = 37.5 bits (83), Expect = 0.011
Identities = 20/58 (34%), Positives = 33/58 (56%)
Frame = +3
Query: 57 YAQNVDLGVKLESLMETIHTEFRNSHPLPGSYAPRKGAICAARFTADDQWYRAKIEKI 230
+ Q V++ LE++ME+I + P AP G C +RFT +D WYRA++ ++
Sbjct: 2060 WVQPVEMASALEAVMESIKSTDSAVVIPPSLLAP--GLPCLSRFTENDVWYRAEVLEV 2115
Score = 36.7 bits (81), Expect = 0.018
Identities = 24/73 (32%), Positives = 33/73 (45%), Gaps = 1/73 (1%)
Frame = +3
Query: 12 YDRVVITEVTPEGHFYAQNVDLGVKLESLMETIHTEFRNSHPLP-GSYAPRKGAICAARF 188
Y V IT V F Q + + ++ME + + + + P A KG C A+F
Sbjct: 226 YLDVFITSVDSPSDFSCQLIANTESIATMMEELASTYTDLGPQDLRLLASTKGYPCCAKF 285
Query: 189 TADDQWYRAKIEK 227
T D WYRA I K
Sbjct: 286 TEDGCWYRALITK 298
Score = 36.7 bits (81), Expect = 0.018
Identities = 27/79 (34%), Positives = 37/79 (46%), Gaps = 1/79 (1%)
Frame = +3
Query: 3 TLKY-DRVVITEVTPEGHFYAQNVDLGVKLESLMETIHTEFRNSHPLPGSYAPRKGAICA 179
TL Y ++ + Q V LESLM +I E + S LP + +G C
Sbjct: 1480 TLSYGEKAYFLSADKIDEIWLQPVQSAEHLESLMASI-AESKPSGILPPTDRI-EGKPCL 1537
Query: 180 ARFTADDQWYRAKIEKITD 236
A+FT D+ WYRA I + D
Sbjct: 1538 AKFTEDNAWYRAVITAVED 1556
Score = 31.5 bits (68), Expect = 0.69
Identities = 27/83 (32%), Positives = 42/83 (50%), Gaps = 4/83 (4%)
Frame = +3
Query: 21 VVITEVTPE-GHFYAQ-NVDLGVKLESLMETIHTEFRNSHPLPGSYAPRK--GAICAARF 188
V +T V E G+ + Q N + KL+ LM I EF S P A G++ A++
Sbjct: 15 VFVTHVDQESGNLFVQINNEEAGKLDDLMVEID-EFVASDRSPPLCASEVLLGSVFFAQY 73
Query: 189 TADDQWYRAKIEKITDNRQVQVY 257
+ D +WYRA++ + Q +VY
Sbjct: 74 SVDQRWYRARLLAV-KGAQSEVY 95
Score = 31.5 bits (68), Expect = 0.69
Identities = 26/85 (30%), Positives = 38/85 (44%), Gaps = 3/85 (3%)
Frame = +2
Query: 254 LYIDYGNRETLDITRLAALPVGTEHDSPFATEYVLCCV-KFPSDPDDRAEAVTSFYNDVV 430
LY+DYGN E + ++R L + + V CC+ S DD +EA+ F V+
Sbjct: 1131 LYVDYGNAEVIPVSRAKIL---KPEFAKLPMQAVECCLHNVSSSTDDTSEAL--FQEQVL 1185
Query: 431 GKRL--LLNVEIRGSPAAVTLVDPN 499
L L+ A V L DP+
Sbjct: 1186 DMELTALVKSVDADGVAGVELFDPS 1210
Score = 30.3 bits (65), Expect = 1.6
Identities = 20/75 (26%), Positives = 38/75 (50%), Gaps = 5/75 (6%)
Frame = +3
Query: 75 LGVKLESLMETIH--TEFRNSHPLPGSYAPRKGAICAARFTADDQWYRAKIEKITDNR-- 242
+G+ +L E ++ E+ +S + +PR C A ++ D+ WYRA I+ I +
Sbjct: 1309 VGMPCAALYEVMNRLNEYYSSGAVKLVTSPRVRLPCVAIYSDDESWYRAIIQSIQGAKGI 1368
Query: 243 -QVQVYTSTMEIERR 284
Q Y ++ EI+ +
Sbjct: 1369 VQFSDYGNSQEIQMK 1383
Score = 29.9 bits (64), Expect = 2.1
Identities = 19/57 (33%), Positives = 30/57 (52%)
Frame = +2
Query: 257 YIDYGNRETLDITRLAALPVGTEHDSPFATEYVLCCVKFPSDPDDRAEAVTSFYNDV 427
Y+DYGN E+L TRL+ + ++ + V C + S P +AE V + N+V
Sbjct: 2124 YVDYGNTESLSTTRLSPI---SDSLLELPAQAVRCTLY--SIPITKAEQVVALLNEV 2175
Score = 27.9 bits (59), Expect = 8.5
Identities = 10/19 (52%), Positives = 15/19 (78%)
Frame = +2
Query: 257 YIDYGNRETLDITRLAALP 313
Y+DYGN E L ++RL+ +P
Sbjct: 1747 YMDYGNSEFLPLSRLSPIP 1765
>SB_51217| Best HMM Match : TUDOR (HMM E-Value=0)
Length = 652
Score = 46.0 bits (104), Expect = 3e-05
Identities = 25/74 (33%), Positives = 35/74 (47%)
Frame = +3
Query: 21 VVITEVTPEGHFYAQNVDLGVKLESLMETIHTEFRNSHPLPGSYAPRKGAICAARFTADD 200
V ++ + FY Q KL L + + + S +P P K C ARFT DD
Sbjct: 63 VYVSHINNLDDFYVQLKSFEDKLAELQDLLMKDCEVSSTIP---QPAKDMFCVARFTEDD 119
Query: 201 QWYRAKIEKITDNR 242
WYRA+I++ NR
Sbjct: 120 AWYRAQIQECIFNR 133
Score = 33.5 bits (73), Expect = 0.17
Identities = 18/56 (32%), Positives = 29/56 (51%), Gaps = 3/56 (5%)
Frame = +3
Query: 84 KLESLMETIHTEFRNSHPLPGSYAPRKGAICAARFTA---DDQWYRAKIEKITDNR 242
KLE++ ++ + F + P Y P+ G +CA R +QWYR K+ I D +
Sbjct: 289 KLEAMEFSMESYFEDRSDEP--YQPKTGDLCAIRTNLIHEKEQWYRVKVLSINDTK 342
>SB_42677| Best HMM Match : TUDOR (HMM E-Value=0)
Length = 1150
Score = 45.2 bits (102), Expect = 5e-05
Identities = 27/91 (29%), Positives = 41/91 (45%), Gaps = 2/91 (2%)
Frame = +3
Query: 18 RVVITEVTPEGHFYAQ--NVDLGVKLESLMETIHTEFRNSHPLPGSYAPRKGAICAARFT 191
+V++TEV + Q N + + +E + T R + S P G C ARFT
Sbjct: 345 KVIVTEVISPWELWLQPINTEFDLLMEKMCMEFATVARGGYKGGLSTPPSVGDFCCARFT 404
Query: 192 ADDQWYRAKIEKITDNRQVQVYTSTMEIERR 284
DD WYR ++ I+ + V M+I R
Sbjct: 405 EDDTWYRVQVISISQSDDTDV-QQVMDIRGR 434
Score = 40.7 bits (91), Expect = 0.001
Identities = 23/71 (32%), Positives = 36/71 (50%), Gaps = 3/71 (4%)
Frame = +3
Query: 18 RVVITEVTPEGHFYAQNV--DLGVKLESLMETIHTEFRNSHP-LPGSYAPRKGAICAARF 188
RV+I EVT FY + + G+ L+ LM+ + + +P Y G C A+F
Sbjct: 734 RVMIAEVTTPSEFYVHLITPEAGL-LDILMDELQQYYSGPDSNVPMDYQLEIGEFCCAKF 792
Query: 189 TADDQWYRAKI 221
+ D +WYRA +
Sbjct: 793 SEDGRWYRANV 803
>SB_35821| Best HMM Match : TUDOR (HMM E-Value=0)
Length = 754
Score = 44.4 bits (100), Expect = 9e-05
Identities = 23/80 (28%), Positives = 40/80 (50%), Gaps = 2/80 (2%)
Frame = +3
Query: 24 VITEVTPEGHFYAQNVDLGVKLESLMETIHTEFRNSHPLPG--SYAPRKGAICAARFTAD 197
++TE+ FY Q GV+L ++ + + N + G SY P + ++C A F +
Sbjct: 359 IVTEIISPACFYIQT---GVELLKQLDVLSADLNNHYNSVGYPSYQPCEFSMCVAPFGSS 415
Query: 198 DQWYRAKIEKITDNRQVQVY 257
W+R +E +T N +VY
Sbjct: 416 TDWFRGFVESVTPNCTARVY 435
Score = 41.5 bits (93), Expect = 6e-04
Identities = 20/75 (26%), Positives = 39/75 (52%), Gaps = 2/75 (2%)
Frame = +3
Query: 24 VITEVTPEGHFYAQNVDL--GVKLESLMETIHTEFRNSHPLPGSYAPRKGAICAARFTAD 197
++TE+ G FY DL KL +L + +++++ + + P +CAA+++
Sbjct: 146 LVTEIMTRGEFYIHLADLQSAQKLVALSSDMDKHYKSTNHV--EFTPEVKTVCAAKYSES 203
Query: 198 DQWYRAKIEKITDNR 242
+WYRA +E +R
Sbjct: 204 GEWYRAIVETRNPDR 218
Score = 38.7 bits (86), Expect = 0.005
Identities = 22/79 (27%), Positives = 39/79 (49%), Gaps = 2/79 (2%)
Frame = +3
Query: 18 RVVITEVTPEGHFYAQNVDLGV--KLESLMETIHTEFRNSHPLPGSYAPRKGAICAARFT 191
++++T++ F Q DL + L L+ + + ++ P P G ICAA+FT
Sbjct: 634 QLIVTDMNTPSDFSIQIADLEMARSLAELIRNMECHYTSTQYPPFYAVP--GMICAAQFT 691
Query: 192 ADDQWYRAKIEKITDNRQV 248
+++WYR IE Q+
Sbjct: 692 LNNKWYRGYIESCDGGIQI 710
Score = 33.1 bits (72), Expect = 0.23
Identities = 21/68 (30%), Positives = 32/68 (47%)
Frame = +2
Query: 257 YIDYGNRETLDITRLAALPVGTEHDSPFATEYVLCCVKFPSDPDDRAEAVTSFYNDVVGK 436
Y+D+GNRETL +T L L H +A L V+ P D ++ + D V
Sbjct: 224 YVDFGNRETLPLTSLQPLKEQFSHLPHYAYRCSLAHVR-PLDNASWSDEAVKVFKDKVPL 282
Query: 437 RLLLNVEI 460
L+++I
Sbjct: 283 NSHLDIKI 290
>SB_4587| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2656
Score = 44.4 bits (100), Expect = 9e-05
Identities = 22/80 (27%), Positives = 42/80 (52%), Gaps = 2/80 (2%)
Frame = +3
Query: 24 VITEVTPEGHFYAQNVDL--GVKLESLMETIHTEFRNSHPLPGSYAPRKGAICAARFTAD 197
++TE+ G FY Q DL KL +L + +++++ + + P +CAA+++
Sbjct: 1427 LVTEIMNPGEFYIQLADLQSAQKLVALSSDMDKHYKSTNHV--EFTPEVKTVCAAKYSES 1484
Query: 198 DQWYRAKIEKITDNRQVQVY 257
+WYRA +E +R V+
Sbjct: 1485 GEWYRAIVETRNPDRTAGVF 1504
Score = 44.4 bits (100), Expect = 9e-05
Identities = 23/80 (28%), Positives = 40/80 (50%), Gaps = 2/80 (2%)
Frame = +3
Query: 24 VITEVTPEGHFYAQNVDLGVKLESLMETIHTEFRNSHPLPG--SYAPRKGAICAARFTAD 197
++TE+ FY Q GV+L ++ + + N + G SY P + ++C A F +
Sbjct: 1640 IVTEIISPACFYIQT---GVELLKQLDVLSADLNNHYNSVGYPSYQPCEFSMCVAPFGSS 1696
Query: 198 DQWYRAKIEKITDNRQVQVY 257
W+R +E +T N +VY
Sbjct: 1697 TDWFRGFVESVTPNCTARVY 1716
Score = 40.3 bits (90), Expect = 0.001
Identities = 24/75 (32%), Positives = 40/75 (53%), Gaps = 2/75 (2%)
Frame = +3
Query: 21 VVITEVTPEGHFYAQ--NVDLGVKLESLMETIHTEFRNSHPLPGSYAPRKGAICAARFTA 194
++ TEV FY Q + +++ L + +++ S P +Y P G +C A+FT
Sbjct: 666 IIATEVESPTLFYVQVCEEEATKRVQQLFFALQ-QYQGS-PYD-NYVPSAGELCIAQFTE 722
Query: 195 DDQWYRAKIEKITDN 239
D+ WYRAK+ I +N
Sbjct: 723 DNSWYRAKVIYIGNN 737
Score = 39.9 bits (89), Expect = 0.002
Identities = 24/69 (34%), Positives = 34/69 (49%), Gaps = 2/69 (2%)
Frame = +3
Query: 21 VVITEVTPEGHFYAQNVDLGVKLESLMETIHTEFRNSHP--LPGSYAPRKGAICAARFTA 194
V + EV + Q + L +LM I + + P LPG P +G C A+F+
Sbjct: 2480 VTVCEVRNPSEIWVQQTETLPALATLMAEI-ASYCDGKPTGLPGP--PAQGDFCLAKFSF 2536
Query: 195 DDQWYRAKI 221
DD WYRAK+
Sbjct: 2537 DDTWYRAKV 2545
Score = 38.7 bits (86), Expect = 0.005
Identities = 22/79 (27%), Positives = 39/79 (49%), Gaps = 2/79 (2%)
Frame = +3
Query: 18 RVVITEVTPEGHFYAQNVDLGV--KLESLMETIHTEFRNSHPLPGSYAPRKGAICAARFT 191
++++T++ F Q DL + L L+ + + ++ P P G ICAA+FT
Sbjct: 1998 QLIVTDMNTPSDFSIQIADLEMARSLAELIRNMECHYTSTQYPPFYAVP--GMICAAQFT 2055
Query: 192 ADDQWYRAKIEKITDNRQV 248
+++WYR IE Q+
Sbjct: 2056 LNNKWYRGYIESCDGGIQI 2074
Score = 35.5 bits (78), Expect = 0.043
Identities = 14/35 (40%), Positives = 21/35 (60%)
Frame = +3
Query: 150 YAPRKGAICAARFTADDQWYRAKIEKITDNRQVQV 254
Y P G +C A F+ D WYRA ++++ + Q QV
Sbjct: 2330 YHPNVGEMCCALFSEDGCWYRAVVDQVLPDSQRQV 2364
Score = 33.1 bits (72), Expect = 0.23
Identities = 24/85 (28%), Positives = 41/85 (48%), Gaps = 5/85 (5%)
Frame = +2
Query: 254 LYIDYGNRETLDITRLAALPVGTEHDSPFATEYVLCCVKFPSDP-----DDRAEAVTSFY 418
LY+D+GN E ++ RL + H + + C + F DP + AEA+++F
Sbjct: 743 LYVDFGNSEDIEADRLRRITKDLAH---IPIQALKCSLDF-KDPKLTAREWTAEAISTFK 798
Query: 419 NDVVGKRLLLNVEIRGSPAAVTLVD 493
+VGKR E+R +T ++
Sbjct: 799 TLIVGKR--REAEVRSQTGVMTRLE 821
Score = 33.1 bits (72), Expect = 0.23
Identities = 21/68 (30%), Positives = 32/68 (47%)
Frame = +2
Query: 257 YIDYGNRETLDITRLAALPVGTEHDSPFATEYVLCCVKFPSDPDDRAEAVTSFYNDVVGK 436
Y+D+GNRETL +T L L H +A L V+ P D ++ + D V
Sbjct: 1505 YVDFGNRETLPLTSLQPLKEQFSHLPHYAYRCSLAHVR-PLDNASWSDEAVKVFKDKVPL 1563
Query: 437 RLLLNVEI 460
L+++I
Sbjct: 1564 NSHLDIKI 1571
Score = 31.9 bits (69), Expect = 0.52
Identities = 21/82 (25%), Positives = 35/82 (42%), Gaps = 2/82 (2%)
Frame = +3
Query: 18 RVVITEVTPEGHFYAQNVDLGVK--LESLMETIHTEFRNSHPLPGSYAPRKGAICAARFT 191
+V+ TEV HFY D + L L ++ + N+ P + P +CAA +
Sbjct: 1195 KVITTEVISPSHFYVHVCDHKTQQDLHDLTTKMNAHY-NTAPPSTHWQPHVDELCAA--S 1251
Query: 192 ADDQWYRAKIEKITDNRQVQVY 257
W R +E + R +V+
Sbjct: 1252 TKGTWSRCIVENVMPGRAAKVF 1273
>SB_18985| Best HMM Match : TUDOR (HMM E-Value=8.3e-37)
Length = 1219
Score = 39.5 bits (88), Expect = 0.003
Identities = 19/60 (31%), Positives = 32/60 (53%), Gaps = 2/60 (3%)
Frame = +3
Query: 84 KLESLMETIHTE--FRNSHPLPGSYAPRKGAICAARFTADDQWYRAKIEKITDNRQVQVY 257
+LE + E I+ F+N PL A +KG +C ++T DD WYRA++ + + +
Sbjct: 688 RLERMAEKINGPDYFKNFEPLA---AAQKGMLCCGQYTEDDMWYRAQVISVESGNPLSAH 744
Score = 34.7 bits (76), Expect = 0.074
Identities = 25/81 (30%), Positives = 41/81 (50%), Gaps = 5/81 (6%)
Frame = +3
Query: 27 ITEVTPEGHFYAQNVDLGVK-LESLMETIHTEFRN---SHPLPGSYAPRK-GAICAARFT 191
+T V +G YAQ + G + L ++M+ + T++ + + P S G CAA+F
Sbjct: 369 VTYVGMDGSIYAQEMKDGDQTLINIMKDLLTKYTDDPETSSAPTSVQSLAVGQPCAAQFA 428
Query: 192 ADDQWYRAKIEKITDNRQVQV 254
D WYRA + N +V+V
Sbjct: 429 DDGMWYRAVVSCFHGNDRVEV 449
>SB_27288| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 458
Score = 37.9 bits (84), Expect = 0.008
Identities = 23/84 (27%), Positives = 39/84 (46%), Gaps = 2/84 (2%)
Frame = +3
Query: 12 YDRVVITEVTPEGHFYAQNVDL--GVKLESLMETIHTEFRNSHPLPGSYAPRKGAICAAR 185
Y V ++ V GHF+ Q V +L+ L+ + E + + G + A
Sbjct: 266 YVEVFVSAVDTPGHFWVQLVKGHGAQELDKLVSDLTEEASTGSADSIVQSVKVGEVYCAP 325
Query: 186 FTADDQWYRAKIEKITDNRQVQVY 257
F D+ WYRAK+ K ++ V+V+
Sbjct: 326 FPQDESWYRAKVTKDNNDGTVEVF 349
>SB_48231| Best HMM Match : TUDOR (HMM E-Value=1.9e-28)
Length = 1282
Score = 35.1 bits (77), Expect = 0.056
Identities = 17/46 (36%), Positives = 25/46 (54%)
Frame = +3
Query: 84 KLESLMETIHTEFRNSHPLPGSYAPRKGAICAARFTADDQWYRAKI 221
+LE+LM I T + G C A+++AD+QWYRA+I
Sbjct: 68 QLEALMSEIGTGYSELDDGLSIMETVPGQACCAQYSADEQWYRAEI 113
>SB_33074| Best HMM Match : TUDOR (HMM E-Value=1.9e-30)
Length = 405
Score = 34.3 bits (75), Expect = 0.098
Identities = 11/19 (57%), Positives = 16/19 (84%)
Frame = +3
Query: 165 GAICAARFTADDQWYRAKI 221
G++C ARF+ DD WYRA++
Sbjct: 214 GSLCLARFSVDDLWYRARV 232
>SB_39313| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 185
Score = 34.3 bits (75), Expect = 0.098
Identities = 19/65 (29%), Positives = 32/65 (49%), Gaps = 4/65 (6%)
Frame = -3
Query: 431 QRHHYRNW----LQLLLGHQGPRGISHSREHTLSQKANRAQYPPGVLPIWLCLTSLDFHS 264
++ H+ NW +LLLG+ +++S H L + +A++ P L W L + HS
Sbjct: 75 EKRHWSNWGCSGFKLLLGYNMNVLVTNSHNHVLVPEKGQARFKPADLAKWYSLHGSNEHS 134
Query: 263 RCINL 249
I L
Sbjct: 135 HSIVL 139
>SB_13392| Best HMM Match : hATC (HMM E-Value=0.16)
Length = 215
Score = 31.5 bits (68), Expect = 0.69
Identities = 14/33 (42%), Positives = 19/33 (57%)
Frame = -3
Query: 401 LLLGHQGPRGISHSREHTLSQKANRAQYPPGVL 303
++LG+ G RG REH S +A+ YPP L
Sbjct: 33 VILGNPGRRGDRAHREHGASSRASCVPYPPNAL 65
>SB_1948| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 959
Score = 28.3 bits (60), Expect = 6.5
Identities = 17/55 (30%), Positives = 24/55 (43%)
Frame = -1
Query: 340 KRRIVLSTHRECCQSGYV*RLSISIVDV*TWTCLLSVIFSIFALYHWSSAVKRAA 176
K R ++ T C Q ++SI D+ T T L I H S A+K A+
Sbjct: 427 KSRDIVKTEESCLQMSKTVWAAVSIADLNTTTSLRPAIVQESNAIHLSDAIKSAS 481
>SB_53352| Best HMM Match : Collagen (HMM E-Value=0.11)
Length = 348
Score = 27.9 bits (59), Expect = 8.5
Identities = 13/40 (32%), Positives = 22/40 (55%)
Frame = -3
Query: 644 PPQVEVASSWRAPERPRYSAINVASRLSRTCSTNTSPSLI 525
PP ++ R P PR +++N +S + R ST +PS +
Sbjct: 242 PPGIQGPQGERGPMGPRAASVNFSSCVYREKSTAFTPSAV 281
>SB_12105| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 540
Score = 27.9 bits (59), Expect = 8.5
Identities = 16/40 (40%), Positives = 20/40 (50%)
Frame = -3
Query: 272 FHSRCINLDLPIVCYFFNLCPVPLVIGCKTSSTDGSLPWS 153
F C L L + YFF+ CP +I TS G+LP S
Sbjct: 378 FEIGCSTLSLRL--YFFSACPHERIILSGTSEPAGTLPGS 415
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,548,140
Number of Sequences: 59808
Number of extensions: 566828
Number of successful extensions: 1563
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 1427
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1557
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1865706635
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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