Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120383.Seq
         (692 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    22   4.1  
AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    21   7.2  
AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory recept...    21   7.2  
AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory recept...    21   7.2  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    21   9.6  

>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 8/17 (47%), Positives = 14/17 (82%)
 Frame = -3

Query: 351 KIAERNDII*IIKLVFI 301
           K +ERND + +++LVF+
Sbjct: 130 KESERNDYVSLLQLVFV 146


>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 6/13 (46%), Positives = 12/13 (92%)
 Frame = +1

Query: 475 NIIHLSFLSCSTA 513
           ++ H+SF++CS+A
Sbjct: 341 SLYHISFMACSSA 353


>AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory receptor
           candidate 45 protein.
          Length = 379

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 11/32 (34%), Positives = 16/32 (50%)
 Frame = -2

Query: 163 LFCLIKYYLMHFLXXXXXXXIYVIQS*SNNIF 68
           LFC++   L+HFL       I +     NN+F
Sbjct: 173 LFCVLYVVLLHFLTYNLSLGIKLRYDDVNNLF 204


>AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory receptor
           candidate 8 protein.
          Length = 379

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 11/32 (34%), Positives = 16/32 (50%)
 Frame = -2

Query: 163 LFCLIKYYLMHFLXXXXXXXIYVIQS*SNNIF 68
           LFC++   L+HFL       I +     NN+F
Sbjct: 173 LFCVLYVVLLHFLTYNLSLGIKLRYDDVNNLF 204


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 9/22 (40%), Positives = 12/22 (54%)
 Frame = -2

Query: 190 ILQQTPIPLLFCLIKYYLMHFL 125
           IL    + LL C+  +Y MH L
Sbjct: 246 ILFTVHLLLLVCIYYFYYMHLL 267


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 133,306
Number of Sequences: 336
Number of extensions: 2557
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18218375
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)