Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV120380.Seq
(809 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z54327-10|CAH04696.1| 596|Caenorhabditis elegans Hypothetical p... 31 0.74
Z54327-3|CAD36481.1| 596|Caenorhabditis elegans Hypothetical pr... 30 1.7
Z54327-2|CAA91123.1| 658|Caenorhabditis elegans Hypothetical pr... 30 1.7
AF480493-1|AAL84283.1| 596|Caenorhabditis elegans EFF-1B precur... 30 1.7
AF480492-1|AAL84282.1| 658|Caenorhabditis elegans EFF-1A precur... 30 1.7
U41543-6|AAB37023.1| 2018|Caenorhabditis elegans Hypothetical pr... 29 3.0
U58758-1|AAB93429.2| 819|Caenorhabditis elegans Hypothetical pr... 29 3.9
Z29094-16|CAA82345.2| 184|Caenorhabditis elegans Hypothetical p... 28 9.1
>Z54327-10|CAH04696.1| 596|Caenorhabditis elegans Hypothetical
protein C26D10.7 protein.
Length = 596
Score = 31.5 bits (68), Expect = 0.74
Identities = 22/96 (22%), Positives = 42/96 (43%), Gaps = 3/96 (3%)
Frame = -2
Query: 778 QNSLPSPTIQITLRVFGGVSLPGVFVNMPITYATIAKETYSFVSATRVKKSRFRNVRNHV 599
++ +P + + + ++ V + P TYAT Y FV+ V+K + N+R+ +
Sbjct: 179 EDDIPKLCCDVRFKPYKNMTFLAVKLEQPTTYATFVYAVYDFVNGYWVEKEK-TNIRSQL 237
Query: 598 ---TQCGRPKINKRIHTRL*IGHASVHTLGSAFFTS 500
TQ +RI + G + H L + + S
Sbjct: 238 DGETQDRHLDKKRRISLAVTAGGRASHQLETGMYFS 273
>Z54327-3|CAD36481.1| 596|Caenorhabditis elegans Hypothetical
protein C26D10.5b protein.
Length = 596
Score = 30.3 bits (65), Expect = 1.7
Identities = 21/95 (22%), Positives = 41/95 (43%), Gaps = 2/95 (2%)
Frame = -2
Query: 778 QNSLPSPTIQITLRVFGGVSLPGVFVNMPITYATIAKETYSFVSATRVK--KSRFRNVRN 605
++ +P + + + ++ V + P TYAT Y FV+ V+ K++ R+ +
Sbjct: 179 EDDIPKLCCDVRFKPYKNMTFLAVKLEQPTTYATFVYAAYDFVNGYWVEKDKTKIRSQLD 238
Query: 604 HVTQCGRPKINKRIHTRL*IGHASVHTLGSAFFTS 500
TQ +RI + G + H L + + S
Sbjct: 239 GGTQDRHLDQKRRISLAVTAGGRASHQLETGMYFS 273
>Z54327-2|CAA91123.1| 658|Caenorhabditis elegans Hypothetical
protein C26D10.5a protein.
Length = 658
Score = 30.3 bits (65), Expect = 1.7
Identities = 21/95 (22%), Positives = 41/95 (43%), Gaps = 2/95 (2%)
Frame = -2
Query: 778 QNSLPSPTIQITLRVFGGVSLPGVFVNMPITYATIAKETYSFVSATRVK--KSRFRNVRN 605
++ +P + + + ++ V + P TYAT Y FV+ V+ K++ R+ +
Sbjct: 179 EDDIPKLCCDVRFKPYKNMTFLAVKLEQPTTYATFVYAAYDFVNGYWVEKDKTKIRSQLD 238
Query: 604 HVTQCGRPKINKRIHTRL*IGHASVHTLGSAFFTS 500
TQ +RI + G + H L + + S
Sbjct: 239 GGTQDRHLDQKRRISLAVTAGGRASHQLETGMYFS 273
>AF480493-1|AAL84283.1| 596|Caenorhabditis elegans EFF-1B precursor
protein.
Length = 596
Score = 30.3 bits (65), Expect = 1.7
Identities = 21/95 (22%), Positives = 41/95 (43%), Gaps = 2/95 (2%)
Frame = -2
Query: 778 QNSLPSPTIQITLRVFGGVSLPGVFVNMPITYATIAKETYSFVSATRVK--KSRFRNVRN 605
++ +P + + + ++ V + P TYAT Y FV+ V+ K++ R+ +
Sbjct: 179 EDDIPKLCCDVRFKPYKNMTFLAVKLEQPTTYATFVYAAYDFVNGYWVEKDKTKIRSQLD 238
Query: 604 HVTQCGRPKINKRIHTRL*IGHASVHTLGSAFFTS 500
TQ +RI + G + H L + + S
Sbjct: 239 GGTQDRHLDQKRRISLAVTAGGRASHQLETGMYFS 273
>AF480492-1|AAL84282.1| 658|Caenorhabditis elegans EFF-1A precursor
protein.
Length = 658
Score = 30.3 bits (65), Expect = 1.7
Identities = 21/95 (22%), Positives = 41/95 (43%), Gaps = 2/95 (2%)
Frame = -2
Query: 778 QNSLPSPTIQITLRVFGGVSLPGVFVNMPITYATIAKETYSFVSATRVK--KSRFRNVRN 605
++ +P + + + ++ V + P TYAT Y FV+ V+ K++ R+ +
Sbjct: 179 EDDIPKLCCDVRFKPYKNMTFLAVKLEQPTTYATFVYAAYDFVNGYWVEKDKTKIRSQLD 238
Query: 604 HVTQCGRPKINKRIHTRL*IGHASVHTLGSAFFTS 500
TQ +RI + G + H L + + S
Sbjct: 239 GGTQDRHLDQKRRISLAVTAGGRASHQLETGMYFS 273
>U41543-6|AAB37023.1| 2018|Caenorhabditis elegans Hypothetical
protein F46H5.4 protein.
Length = 2018
Score = 29.5 bits (63), Expect = 3.0
Identities = 20/79 (25%), Positives = 38/79 (48%)
Frame = +3
Query: 261 SFENYPIVNTAFINSLIVNGFKYNQVDDHVVCEYCEAEIKNWSEDECIEYAHVTLSPYCA 440
+ EN P N F + + G K + D + +C +E++ + + + L A
Sbjct: 494 NIENMPSCNLKFSSFIRQEGDKTSDEDIYRIC----SEMRRTNGKVHKKMFNFELELTLA 549
Query: 441 YANKIAEHESFGDNITINA 497
+NK E++S G N+T+N+
Sbjct: 550 GSNKSKEYQSHGSNLTLNS 568
>U58758-1|AAB93429.2| 819|Caenorhabditis elegans Hypothetical
protein ZK1127.7 protein.
Length = 819
Score = 29.1 bits (62), Expect = 3.9
Identities = 19/60 (31%), Positives = 28/60 (46%), Gaps = 5/60 (8%)
Frame = +2
Query: 560 MDTFVNFWPAALR-----DMITNIAEAGLFYTGRGDETVCFFCDCCVRDWHINEDAWQRH 724
++ F FWPA + D IT IA+A G E V F+ +W +N D W+ +
Sbjct: 165 LNFFHRFWPALFKRDFVEDFITPIAKAT-----EGKEEVSFYSLPEYSEWRMNTDNWKSY 219
>Z29094-16|CAA82345.2| 184|Caenorhabditis elegans Hypothetical
protein C07A9.9 protein.
Length = 184
Score = 27.9 bits (59), Expect = 9.1
Identities = 14/44 (31%), Positives = 20/44 (45%), Gaps = 4/44 (9%)
Frame = +3
Query: 324 KYNQVDDHVV----CEYCEAEIKNWSEDECIEYAHVTLSPYCAY 443
+Y VDD V C +C W D+C + H +L +C Y
Sbjct: 59 EYQYVDDDVPNSERCHFCMKRKGRWMGDDCSD--HSSLCKHCCY 100
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,739,560
Number of Sequences: 27780
Number of extensions: 400063
Number of successful extensions: 1287
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1211
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1287
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1987863822
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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