Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV120379.Seq
(781 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC1711.05 |||nucleocytoplasmic transport chaperone Srp40 |Schi... 30 0.32
SPAC631.02 |||bromodomain protein|Schizosaccharomyces pombe|chr ... 29 0.99
SPAP14E8.02 |||transcription factor |Schizosaccharomyces pombe|c... 29 0.99
SPAC6G9.12 |cfr1||Chs five related protein Cfr1|Schizosaccharomy... 28 1.3
SPCC18.01c |adg3|SPCC74.07c|beta-glucosidase Adg3 |Schizosacchar... 28 1.3
SPBC23G7.04c |nif1||SEL1 repear protein Nif1|Schizosaccharomyces... 28 1.7
SPBC1306.01c ||SPBC409.22c|translation elongation factor G|Schiz... 27 2.3
SPBC1706.01 |tea4|wsh3|tip elongation aberrant protein Tea4|Schi... 27 2.3
SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 27 3.0
SPAC824.07 |||hydroxyacylglutathione hydrolase |Schizosaccharomy... 27 3.0
SPCC1322.10 |||conserved fungal protein|Schizosaccharomyces pomb... 27 3.0
SPBC1734.12c |alg12||dolichyl pyrophosphate Man7GlcNAc2 alpha-1,... 27 4.0
SPBC215.07c |||PWWP domain protein|Schizosaccharomyces pombe|chr... 27 4.0
SPBC12C2.05c |||diacylglycerol binding protein Bzz1 |Schizosacch... 27 4.0
SPCC645.06c |rgf3|lad1|RhoGEF Rgf3|Schizosaccharomyces pombe|chr... 27 4.0
SPBC651.10 |nse5||Smc5-6 complex non-SMC subunit Nse5|Schizosacc... 27 4.0
SPCC1223.13 |cbf12||CBF1/Su|Schizosaccharomyces pombe|chr 3|||Ma... 27 4.0
SPCC1672.11c |||P-type ATPase |Schizosaccharomyces pombe|chr 3||... 26 5.3
SPCC1281.01 |ags1|mok1, SPCC338.01c, SPCC17A7.01|alpha-1,4-gluca... 26 5.3
SPAC23H4.16c |||sequence orphan|Schizosaccharomyces pombe|chr 1|... 26 7.0
SPBC146.12 |coq6||monooxygenase Coq6|Schizosaccharomyces pombe|c... 26 7.0
SPBC26H8.09c |snf59||SWI/SNF complex subunit Snf59|Schizosacchar... 25 9.2
SPAC25B8.03 |||phosphatidylserine decarboxylase|Schizosaccharomy... 25 9.2
SPAC19A8.01c |sec73|sec7c, SPAC23H3.01|guanyl-nucleotide exchang... 25 9.2
>SPBC1711.05 |||nucleocytoplasmic transport chaperone Srp40
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 451
Score = 30.3 bits (65), Expect = 0.32
Identities = 22/64 (34%), Positives = 33/64 (51%), Gaps = 3/64 (4%)
Frame = -3
Query: 233 NDVTSSLAFVPSSKSSQRPDCSDNTSD---DTSPCSTDYHEASALDLVQSLDEISSCDSS 63
+D +SS + S SS+ D S N+SD D+S S+D S+ + S S DSS
Sbjct: 252 SDSSSSSSDSESESSSKDSDSSSNSSDSEDDSSSDSSDSESESSSEDSDSTSSSSDSDSS 311
Query: 62 NFSQ 51
+ S+
Sbjct: 312 SSSE 315
Score = 29.1 bits (62), Expect = 0.75
Identities = 22/75 (29%), Positives = 36/75 (48%)
Frame = -3
Query: 248 NADISNDVTSSLAFVPSSKSSQRPDCSDNTSDDTSPCSTDYHEASALDLVQSLDEISSCD 69
++D ++ +S + SS SS + S +D +S S E+S+ D S SS D
Sbjct: 204 SSDSESESSSEGSDSSSSSSSSESESSSEDNDSSSSSSDSESESSSED---SDSSSSSSD 260
Query: 68 SSNFSQSRDISPVNN 24
S + S S+D +N
Sbjct: 261 SESESSSKDSDSSSN 275
>SPAC631.02 |||bromodomain protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 727
Score = 28.7 bits (61), Expect = 0.99
Identities = 16/51 (31%), Positives = 24/51 (47%), Gaps = 1/51 (1%)
Frame = -1
Query: 391 PDLINSDLLTLKDPTHPISSNI-VSSDKQVSNIDFCENRESSTETEDYSTP 242
P N D + PTHP SNI V D + ++ E +SS + ++ P
Sbjct: 92 PPYTNFDDESPSSPTHPSVSNITVDGDSKKHSLQLQEEEKSSESLDSHTHP 142
>SPAP14E8.02 |||transcription factor |Schizosaccharomyces pombe|chr
1|||Manual
Length = 566
Score = 28.7 bits (61), Expect = 0.99
Identities = 12/32 (37%), Positives = 17/32 (53%)
Frame = -2
Query: 621 DGVPLIPSNDPWSVYNNDNTELEFYSPHYGIP 526
+ +PL+PS+ P Y ND L Y+ IP
Sbjct: 203 EALPLMPSSPPSQDYQNDQNHLILYTNSESIP 234
>SPAC6G9.12 |cfr1||Chs five related protein Cfr1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 620
Score = 28.3 bits (60), Expect = 1.3
Identities = 21/79 (26%), Positives = 35/79 (44%), Gaps = 1/79 (1%)
Frame = -3
Query: 245 ADISNDVTSSLAF-VPSSKSSQRPDCSDNTSDDTSPCSTDYHEASALDLVQSLDEISSCD 69
A+ S DV+S + SSK ++ P S+N D ST ++ +E S+ +
Sbjct: 335 AEQSIDVSSDIGLRSDSSKPNEAPTSSENIKADQPENSTKQENPEEDMQIKDAEEHSNLE 394
Query: 68 SSNFSQSRDISPVNNQLKK 12
S+ +Q NN +K
Sbjct: 395 STPAAQQTSEVEANNHQEK 413
>SPCC18.01c |adg3|SPCC74.07c|beta-glucosidase Adg3
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1131
Score = 28.3 bits (60), Expect = 1.3
Identities = 24/80 (30%), Positives = 41/80 (51%), Gaps = 2/80 (2%)
Frame = -3
Query: 248 NADISNDVTSSLAFVPSSKSSQRPDCSDNTSDDTSPCSTDYHEASALDLVQS--LDEISS 75
++ ++ +TSS + +PSS S++ S+ S S +S+ LVQS + + S
Sbjct: 986 SSSTTSGLTSSSSTIPSSTR------SESNSESASTSSASKRSSSSTSLVQSNPVKTVVS 1039
Query: 74 CDSSNFSQSRDISPVNNQLK 15
+S F+ S+ IS V N K
Sbjct: 1040 LESYKFTTSK-ISLVKNPTK 1058
>SPBC23G7.04c |nif1||SEL1 repear protein Nif1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 681
Score = 27.9 bits (59), Expect = 1.7
Identities = 17/47 (36%), Positives = 24/47 (51%), Gaps = 2/47 (4%)
Frame = -2
Query: 762 HAYDQMQLSNMLMLP--ENYLAFEDSFMSAWDYKPNIIMDRVNNNEI 628
H + +LS++ P E+ F D F +A D PN I D N+N I
Sbjct: 116 HYFVAQKLSSVFGTPDLEDETDFFDYFSAAPDVHPNDIFDSYNSNNI 162
>SPBC1306.01c ||SPBC409.22c|translation elongation factor
G|Schizosaccharomyces pombe|chr 2|||Manual
Length = 770
Score = 27.5 bits (58), Expect = 2.3
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = -2
Query: 594 DPWSVYNNDNTELEFYSPHYGIPSGEQD 511
DPW V NT+L+ + IP G++D
Sbjct: 213 DPWKVIQQINTKLKIPAAAVQIPIGQED 240
>SPBC1706.01 |tea4|wsh3|tip elongation aberrant protein
Tea4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 809
Score = 27.5 bits (58), Expect = 2.3
Identities = 15/44 (34%), Positives = 21/44 (47%)
Frame = -3
Query: 173 CSDNTSDDTSPCSTDYHEASALDLVQSLDEISSCDSSNFSQSRD 42
CS N+SDD DY + ++ EI DSS+ S S +
Sbjct: 227 CSSNSSDDEMDSENDYEAMVNRTVAENGLEIEFSDSSDSSLSAE 270
>SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 534
Score = 27.1 bits (57), Expect = 3.0
Identities = 22/74 (29%), Positives = 33/74 (44%), Gaps = 2/74 (2%)
Frame = -3
Query: 236 SNDVTSSLAFVPSSKSSQRPDCSDNTSDDTSPCSTDYHEASALDLVQS--LDEISSCDSS 63
S+ TSS SS SS RP S + S S + S+ V S +S SS
Sbjct: 374 SSSSTSSSTLTSSSSSSSRPASSSSHSSSLSSHKSSSSSKSSSAPVSSAFYHNSTSSRSS 433
Query: 62 NFSQSRDISPVNNQ 21
+ S S +S ++++
Sbjct: 434 SHSSSHSLSSLSSK 447
>SPAC824.07 |||hydroxyacylglutathione hydrolase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 256
Score = 27.1 bits (57), Expect = 3.0
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = -1
Query: 337 SSNIVSSDKQVSNIDFCENRESST 266
SS I S+ + +DFC+N ES+T
Sbjct: 188 SSTIFSTPELTKLVDFCKNHESTT 211
>SPCC1322.10 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 262
Score = 27.1 bits (57), Expect = 3.0
Identities = 21/80 (26%), Positives = 39/80 (48%)
Frame = -3
Query: 263 NGRLFNADISNDVTSSLAFVPSSKSSQRPDCSDNTSDDTSPCSTDYHEASALDLVQSLDE 84
+G ++++ ++ +SS A PSS S+ S ++S S T +SA V S
Sbjct: 130 SGGIYSSTSASSTSSSTA-TPSSSSTTSSSSSSSSSTPISSSITSSISSSASSSVSS-SS 187
Query: 83 ISSCDSSNFSQSRDISPVNN 24
SS S + + ++ +S +N
Sbjct: 188 ASSSGSISSADAKTVSASSN 207
>SPBC1734.12c |alg12||dolichyl pyrophosphate Man7GlcNAc2
alpha-1,3-glucosyltransferase Alg12 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 546
Score = 26.6 bits (56), Expect = 4.0
Identities = 16/38 (42%), Positives = 22/38 (57%), Gaps = 2/38 (5%)
Frame = -1
Query: 211 LLYLAAKVRRGRIALIIRVTTLPLVLQ--ITTKHPLLI 104
+L AA + R IAL++ LPL+LQ IT LL+
Sbjct: 166 ILVFAAAIVRSEIALLLMCLILPLLLQRRITLSKLLLV 203
>SPBC215.07c |||PWWP domain protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 568
Score = 26.6 bits (56), Expect = 4.0
Identities = 12/32 (37%), Positives = 17/32 (53%)
Frame = -3
Query: 206 VPSSKSSQRPDCSDNTSDDTSPCSTDYHEASA 111
VPSS+S + SD + SP DY++ A
Sbjct: 223 VPSSESEVSEEESDQEMSEPSPIEEDYNDTKA 254
>SPBC12C2.05c |||diacylglycerol binding protein Bzz1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 642
Score = 26.6 bits (56), Expect = 4.0
Identities = 12/32 (37%), Positives = 21/32 (65%)
Frame = -3
Query: 206 VPSSKSSQRPDCSDNTSDDTSPCSTDYHEASA 111
VP++ + P+ +D+ + DTS +TD +ASA
Sbjct: 443 VPANCKNGEPEVADDDAVDTSVTATDDFDASA 474
>SPCC645.06c |rgf3|lad1|RhoGEF Rgf3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1275
Score = 26.6 bits (56), Expect = 4.0
Identities = 16/58 (27%), Positives = 25/58 (43%), Gaps = 1/58 (1%)
Frame = -2
Query: 756 YDQMQLSNMLMLPENYL-AFEDSFMSAWDYKPNIIMDRVNNNEIFYDGVPLIPSNDPW 586
+D + N + YL AF D F+ W+ + + + N+I Y PSN W
Sbjct: 1186 FDWIGKPNSVTSCHGYLIAFNDEFVEIWNTRTRKLNQIIQGNDIKY-----YPSNSDW 1238
>SPBC651.10 |nse5||Smc5-6 complex non-SMC subunit
Nse5|Schizosaccharomyces pombe|chr 2|||Manual
Length = 388
Score = 26.6 bits (56), Expect = 4.0
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = -1
Query: 430 TIEAQSELINIDAPDLINSDLLTLKDPTHPIS 335
T+ Q+EL+ ID P I D+L L D + +S
Sbjct: 352 TMYQQTELVGIDRPMAILKDMLVLLDISKKLS 383
>SPCC1223.13 |cbf12||CBF1/Su|Schizosaccharomyces pombe|chr
3|||Manual
Length = 963
Score = 26.6 bits (56), Expect = 4.0
Identities = 18/69 (26%), Positives = 31/69 (44%), Gaps = 3/69 (4%)
Frame = -2
Query: 744 QLSNMLMLPENYLAFEDSFMSAWDY---KPNIIMDRVNNNEIFYDGVPLIPSNDPWSVYN 574
Q +++L NY +++SF+S DY + NI + VP + Y+
Sbjct: 288 QKASVLGTVNNYRQYQNSFISLNDYQAAQSNISSPSSRFPTPYSPSVPFGTYQEKEKSYS 347
Query: 573 NDNTELEFY 547
D+ EL +Y
Sbjct: 348 QDHAELSYY 356
>SPCC1672.11c |||P-type ATPase |Schizosaccharomyces pombe|chr
3|||Manual
Length = 1315
Score = 26.2 bits (55), Expect = 5.3
Identities = 17/49 (34%), Positives = 26/49 (53%), Gaps = 4/49 (8%)
Frame = -2
Query: 726 MLPEN-YL---AFEDSFMSAWDYKPNIIMDRVNNNEIFYDGVPLIPSND 592
MLPE+ Y+ F++ SA + ++ + NNEIF D L P+ D
Sbjct: 892 MLPEDGYVFLPRFDEESESADEASRQLVWQAIENNEIFLDPHTLRPNVD 940
>SPCC1281.01 |ags1|mok1, SPCC338.01c, SPCC17A7.01|alpha-1,4-glucan
synthase Ags1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 2410
Score = 26.2 bits (55), Expect = 5.3
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = -2
Query: 729 LMLPENYLAFEDSFMSAWDYKPNIIMD 649
L+ P + + EDS+ S+W PNI +D
Sbjct: 678 LIYPYDTIELEDSWNSSWGCIPNIELD 704
>SPAC23H4.16c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 328
Score = 25.8 bits (54), Expect = 7.0
Identities = 10/29 (34%), Positives = 19/29 (65%)
Frame = -1
Query: 205 YLAAKVRRGRIALIIRVTTLPLVLQITTK 119
YL AK+ GRI+ +++V+ L +T++
Sbjct: 87 YLLAKILSGRISELLKVSPFELAASVTSQ 115
>SPBC146.12 |coq6||monooxygenase Coq6|Schizosaccharomyces pombe|chr
2|||Manual
Length = 466
Score = 25.8 bits (54), Expect = 7.0
Identities = 10/27 (37%), Positives = 17/27 (62%)
Frame = +1
Query: 658 NVRFVIPCRHERIFEG*IIFR*HEHVT 738
N+ F++PC ++ +G I+R H H T
Sbjct: 159 NLEFLMPCTITKLSKGENIYRTHIHTT 185
>SPBC26H8.09c |snf59||SWI/SNF complex subunit
Snf59|Schizosaccharomyces pombe|chr 2|||Manual
Length = 515
Score = 25.4 bits (53), Expect = 9.2
Identities = 13/34 (38%), Positives = 21/34 (61%)
Frame = -1
Query: 373 DLLTLKDPTHPISSNIVSSDKQVSNIDFCENRES 272
DL ++P H SSN S++ SN+D EN+++
Sbjct: 111 DLNMSEEPKHHDSSNKESTNLDNSNMDESENQKN 144
>SPAC25B8.03 |||phosphatidylserine decarboxylase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 516
Score = 25.4 bits (53), Expect = 9.2
Identities = 8/24 (33%), Positives = 15/24 (62%)
Frame = -1
Query: 511 WIEYMPLTDLDTIPQYMSLPGENL 440
W++ +TD+D++P + PG L
Sbjct: 334 WVQEADVTDIDSLPWHNIRPGNKL 357
>SPAC19A8.01c |sec73|sec7c, SPAC23H3.01|guanyl-nucleotide exchange
factor Sec73 |Schizosaccharomyces pombe|chr 1|||Manual
Length = 1082
Score = 25.4 bits (53), Expect = 9.2
Identities = 22/69 (31%), Positives = 33/69 (47%)
Frame = -3
Query: 251 FNADISNDVTSSLAFVPSSKSSQRPDCSDNTSDDTSPCSTDYHEASALDLVQSLDEISSC 72
FN + S+D+ + + V S S + S+ D TSP STD ++ SL SS
Sbjct: 93 FNHNWSSDLQQANSPVASYSSQSVSNDSNFPKDVTSPISTDLSGSN-----PSLKSPSSI 147
Query: 71 DSSNFSQSR 45
+S+ SR
Sbjct: 148 NSAKLRASR 156
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,921,336
Number of Sequences: 5004
Number of extensions: 59512
Number of successful extensions: 240
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 223
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 240
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 377352472
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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