Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV120379.Seq
(781 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_48385| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.049
SB_6076| Best HMM Match : Defensin_beta (HMM E-Value=2) 32 0.45
SB_53888| Best HMM Match : TSP_3 (HMM E-Value=9.2e-11) 32 0.60
SB_2375| Best HMM Match : Pentapeptide_2 (HMM E-Value=2.7) 31 1.0
SB_45899| Best HMM Match : Exo_endo_phos (HMM E-Value=0.011) 30 2.4
SB_34989| Best HMM Match : Tropomyosin (HMM E-Value=3.2) 30 2.4
SB_6911| Best HMM Match : Ank (HMM E-Value=0) 29 4.2
SB_23985| Best HMM Match : CRAM_rpt (HMM E-Value=3.4) 29 4.2
SB_51220| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.6
SB_45953| Best HMM Match : LRR_1 (HMM E-Value=7.4e-15) 29 5.6
SB_34157| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.4
SB_48395| Best HMM Match : MAM (HMM E-Value=0) 28 7.4
SB_18600| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.4
SB_57377| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.8
SB_8823| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.8
>SB_48385| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 386
Score = 35.5 bits (78), Expect = 0.049
Identities = 24/87 (27%), Positives = 41/87 (47%), Gaps = 3/87 (3%)
Frame = -3
Query: 275 IVNRNGRLFNADISNDV-TSSLAFVPS--SKSSQRPDCSDNTSDDTSPCSTDYHEASALD 105
I N N A I+ND TSS A + + + SS P +D + T+P + DY+ +S
Sbjct: 70 IANDNNASSTAPIANDYNTSSTAPIANDYNASSTVPIANDYNTSSTAPIANDYNTSSTAS 129
Query: 104 LVQSLDEISSCDSSNFSQSRDISPVNN 24
+ + S+ +N + +P+ N
Sbjct: 130 IANDNNASSTAPIANDYNASSTAPIAN 156
Score = 34.7 bits (76), Expect = 0.085
Identities = 23/87 (26%), Positives = 40/87 (45%), Gaps = 3/87 (3%)
Frame = -3
Query: 275 IVNRNGRLFNADISNDVT-SSLAFVPS--SKSSQRPDCSDNTSDDTSPCSTDYHEASALD 105
I N N A I+ND SS A + + + SS P +D + T+P + DY+ +S
Sbjct: 130 IANDNNASSTAPIANDYNASSTAPIANDYNTSSTAPIANDYNASSTAPIANDYNASSTAP 189
Query: 104 LVQSLDEISSCDSSNFSQSRDISPVNN 24
+ + S+ +N + +P+ N
Sbjct: 190 IANDYNASSTAPIANDYNASSTAPIAN 216
Score = 34.3 bits (75), Expect = 0.11
Identities = 23/87 (26%), Positives = 39/87 (44%), Gaps = 3/87 (3%)
Frame = -3
Query: 275 IVNRNGRLFNADISNDV-TSSLAFVPSSK--SSQRPDCSDNTSDDTSPCSTDYHEASALD 105
I N A I+ND TSS A + + SS P +D + T+P + DY+ +S
Sbjct: 106 IANDYNTSSTAPIANDYNTSSTASIANDNNASSTAPIANDYNASSTAPIANDYNTSSTAP 165
Query: 104 LVQSLDEISSCDSSNFSQSRDISPVNN 24
+ + S+ +N + +P+ N
Sbjct: 166 IANDYNASSTAPIANDYNASSTAPIAN 192
Score = 32.3 bits (70), Expect = 0.45
Identities = 22/87 (25%), Positives = 40/87 (45%), Gaps = 3/87 (3%)
Frame = -3
Query: 275 IVNRNGRLFNADISNDVT-SSLAFVPS--SKSSQRPDCSDNTSDDTSPCSTDYHEASALD 105
I N A I+ND SS A + + + SS P +D + T+P + DY+ +S
Sbjct: 166 IANDYNASSTAPIANDYNASSTAPIANDYNASSTAPIANDYNASSTAPIANDYNASSTAP 225
Query: 104 LVQSLDEISSCDSSNFSQSRDISPVNN 24
+ + S+ +N + + +P+ N
Sbjct: 226 IANDNNASSTASIANDNNASSTAPIAN 252
Score = 31.1 bits (67), Expect = 1.0
Identities = 22/87 (25%), Positives = 39/87 (44%), Gaps = 3/87 (3%)
Frame = -3
Query: 275 IVNRNGRLFNADISNDVT-SSLAFVPS--SKSSQRPDCSDNTSDDTSPCSTDYHEASALD 105
I N A I+ND SS A + + + SS P +D + T+P + DY+ +S
Sbjct: 118 IANDYNTSSTASIANDNNASSTAPIANDYNASSTAPIANDYNTSSTAPIANDYNASSTAP 177
Query: 104 LVQSLDEISSCDSSNFSQSRDISPVNN 24
+ + S+ +N + +P+ N
Sbjct: 178 IANDYNASSTAPIANDYNASSTAPIAN 204
Score = 31.1 bits (67), Expect = 1.0
Identities = 19/77 (24%), Positives = 40/77 (51%), Gaps = 5/77 (6%)
Frame = -3
Query: 239 ISNDVTSSLAFVP----SSKSSQRPDCSDNTSDDTSPCSTDYHEASALDLVQSLDEISSC 72
I+ND +S + VP ++ SS +DN + T+P + DY+ +S + + S+
Sbjct: 274 IANDYNAS-STVPIANDNNASSTASIANDNNASSTAPIANDYNASSTAPIANDYNASSTA 332
Query: 71 DSSN-FSQSRDISPVNN 24
+N ++ + +P++N
Sbjct: 333 PFANYYNNTSSTAPISN 349
Score = 29.9 bits (64), Expect = 2.4
Identities = 22/87 (25%), Positives = 37/87 (42%), Gaps = 3/87 (3%)
Frame = -3
Query: 275 IVNRNGRLFNADISNDVT-SSLAFVPSSK--SSQRPDCSDNTSDDTSPCSTDYHEASALD 105
I N A I+ND SS A + + SS +DN + T+P + DY+ +S
Sbjct: 202 IANDYNASSTAPIANDYNASSTAPIANDNNASSTASIANDNNASSTAPIANDYNASSTAP 261
Query: 104 LVQSLDEISSCDSSNFSQSRDISPVNN 24
+ + S+ +N + P+ N
Sbjct: 262 IANDYNTSSTVPIANDYNASSTVPIAN 288
Score = 29.9 bits (64), Expect = 2.4
Identities = 21/87 (24%), Positives = 39/87 (44%), Gaps = 3/87 (3%)
Frame = -3
Query: 275 IVNRNGRLFNADISNDVT-SSLAFVPSSK--SSQRPDCSDNTSDDTSPCSTDYHEASALD 105
I N A I+ND SS A + + SS P +D + T+P + DY+ +S +
Sbjct: 214 IANDYNASSTAPIANDNNASSTASIANDNNASSTAPIANDYNASSTAPIANDYNTSSTVP 273
Query: 104 LVQSLDEISSCDSSNFSQSRDISPVNN 24
+ + S+ +N + + + + N
Sbjct: 274 IANDYNASSTVPIANDNNASSTASIAN 300
>SB_6076| Best HMM Match : Defensin_beta (HMM E-Value=2)
Length = 315
Score = 32.3 bits (70), Expect = 0.45
Identities = 18/66 (27%), Positives = 30/66 (45%)
Frame = -3
Query: 200 SSKSSQRPDCSDNTSDDTSPCSTDYHEASALDLVQSLDEISSCDSSNFSQSRDISPVNNQ 21
+S+ S RP S S D PC T Y+ + ++ + SS S + S S + + +
Sbjct: 15 TSRGSNRPGFSHKQSYDQLPCPTSYYGDNYQSIIANQRRSSSDGSQSCSTSEETIEIPSD 74
Query: 20 LKKKKK 3
+ KK
Sbjct: 75 IAHPKK 80
>SB_53888| Best HMM Match : TSP_3 (HMM E-Value=9.2e-11)
Length = 1012
Score = 31.9 bits (69), Expect = 0.60
Identities = 19/55 (34%), Positives = 25/55 (45%), Gaps = 1/55 (1%)
Frame = -3
Query: 203 PSSKSSQRPDCSDNTSDDTSPCSTDYHEASALDLVQSLDEISSCDSS-NFSQSRD 42
P + D+ D TSPC +DY + S D D+ SS DS N + RD
Sbjct: 415 PRDSDHDQTSPRDSDHDQTSPCDSDYDQTSPCD--SDHDQTSSRDSDHNQTSPRD 467
>SB_2375| Best HMM Match : Pentapeptide_2 (HMM E-Value=2.7)
Length = 521
Score = 31.1 bits (67), Expect = 1.0
Identities = 28/83 (33%), Positives = 36/83 (43%), Gaps = 1/83 (1%)
Frame = -3
Query: 269 NRNGRLFNADISNDVTSSLAFVPSSKSSQRPDCSDNTSDDTSPCSTDYHEASALDLVQSL 90
N N N+D SN S+ S SS SDN++ D S + E S D S
Sbjct: 72 NSNSDNSNSDNSNTDNSNSDNSSSDNSSSDNSNSDNSNTDNSTSNNSNPENSTSD--NSN 129
Query: 89 DEISSCDSSNFSQSR-DISPVNN 24
S+ D+SN S+ D S NN
Sbjct: 130 SNNSNQDNSNSDDSKPDNSNTNN 152
>SB_45899| Best HMM Match : Exo_endo_phos (HMM E-Value=0.011)
Length = 707
Score = 29.9 bits (64), Expect = 2.4
Identities = 17/52 (32%), Positives = 29/52 (55%)
Frame = -1
Query: 466 YMSLPGENLNNATIEAQSELINIDAPDLINSDLLTLKDPTHPISSNIVSSDK 311
+ +LP + L+ A + Q ++I P+L +DLLTL+D H ++S K
Sbjct: 657 FSNLP-KYLSEALEKVQKRSLSIIFPNLTRADLLTLEDCRHNACIKLISGIK 707
>SB_34989| Best HMM Match : Tropomyosin (HMM E-Value=3.2)
Length = 314
Score = 29.9 bits (64), Expect = 2.4
Identities = 19/57 (33%), Positives = 28/57 (49%)
Frame = -1
Query: 424 EAQSELINIDAPDLINSDLLTLKDPTHPISSNIVSSDKQVSNIDFCENRESSTETED 254
E EL+N D +LI+ + KD S+ S DK+ SN + RES ++D
Sbjct: 22 EFDDELLNED--ELISETAASSKDEVQRKSNEAKSEDKKTSNCELQNVRESRKPSKD 76
>SB_6911| Best HMM Match : Ank (HMM E-Value=0)
Length = 1961
Score = 29.1 bits (62), Expect = 4.2
Identities = 17/49 (34%), Positives = 27/49 (55%)
Frame = -1
Query: 421 AQSELINIDAPDLINSDLLTLKDPTHPISSNIVSSDKQVSNIDFCENRE 275
A+ EL+ +A D INS LKDP + N + K++ ++ ENR+
Sbjct: 170 AEQELLEHEANDAINSFKNLLKDPVFLLDPNAEDALKKIKDL---ENRD 215
>SB_23985| Best HMM Match : CRAM_rpt (HMM E-Value=3.4)
Length = 323
Score = 29.1 bits (62), Expect = 4.2
Identities = 22/83 (26%), Positives = 38/83 (45%)
Frame = -3
Query: 269 NRNGRLFNADISNDVTSSLAFVPSSKSSQRPDCSDNTSDDTSPCSTDYHEASALDLVQSL 90
N + +D SN+ S S++S +R + ++ DD S S + +E+ D
Sbjct: 117 NESDESNESDKSNESDKSNESDKSNESDKRNESDESDEDDESNGSDESNES---DESNGS 173
Query: 89 DEISSCDSSNFSQSRDISPVNNQ 21
DE + D SN S + S +N+
Sbjct: 174 DESNGSDESNESDESNESDESNE 196
>SB_51220| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1601
Score = 28.7 bits (61), Expect = 5.6
Identities = 20/83 (24%), Positives = 36/83 (43%)
Frame = -1
Query: 499 MPLTDLDTIPQYMSLPGENLNNATIEAQSELINIDAPDLINSDLLTLKDPTHPISSNIVS 320
+ L+ +D + Q + L L NAT+ EL+ P +L T ++S +S
Sbjct: 246 LDLSGVDPLAQLVRLTSLQLQNATLSVFLELV---PPLFPKKSILDSNTTTEMLNSLRIS 302
Query: 319 SDKQVSNIDFCENRESSTETEDY 251
SD + I N + ++D+
Sbjct: 303 SDSSIVTIGRLVNYTTGLTSKDF 325
>SB_45953| Best HMM Match : LRR_1 (HMM E-Value=7.4e-15)
Length = 1427
Score = 28.7 bits (61), Expect = 5.6
Identities = 23/95 (24%), Positives = 44/95 (46%), Gaps = 1/95 (1%)
Frame = -3
Query: 284 KSRIVNRNGRLFNADISNDVTSSLAFVPSSKSSQRPDCSDNTSDDTSPCSTDYHEASALD 105
K R +R+ R ++ S+ + + + VP+ K D ++ S ++ + D
Sbjct: 201 KQREASRSRRTLSSSSSSGESEASSPVPTPKG-----LFDLLHEEQSSAEAPSYQDATPD 255
Query: 104 LVQSLDEISSCDSSNFSQSRDIS-PVNNQLKKKKK 3
L + DEIS + NF +S + VN + +KK+
Sbjct: 256 LSSNDDEISFVGTGNFQESNNNERTVNTGVSRKKR 290
>SB_34157| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 252
Score = 28.3 bits (60), Expect = 7.4
Identities = 15/41 (36%), Positives = 23/41 (56%)
Frame = -1
Query: 382 INSDLLTLKDPTHPISSNIVSSDKQVSNIDFCENRESSTET 260
+NSD+ P PISS + S +Q+S D EN E + ++
Sbjct: 108 LNSDI---NCPQSPISSPLGGSAEQISECDGAENNEGTADS 145
>SB_48395| Best HMM Match : MAM (HMM E-Value=0)
Length = 901
Score = 28.3 bits (60), Expect = 7.4
Identities = 12/43 (27%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
Frame = +1
Query: 610 RHSIVEYFIIVNSIHYNVRFVIP-CRHERIFEG*IIFR*HEHV 735
+H + + + N + IP +H+ +FEG I+ H+HV
Sbjct: 446 KHCLKQGLLCAKEDENNALYFIPLAKHKHLFEGDIVLTDHDHV 488
>SB_18600| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2388
Score = 28.3 bits (60), Expect = 7.4
Identities = 15/43 (34%), Positives = 20/43 (46%)
Frame = -3
Query: 152 DTSPCSTDYHEASALDLVQSLDEISSCDSSNFSQSRDISPVNN 24
DT D E +V DE+S S++ Q DISP N+
Sbjct: 228 DTEYSIRDCDEKGGWHMVGQEDEVSKTKSTDLPQVEDISPCNS 270
>SB_57377| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 264
Score = 27.9 bits (59), Expect = 9.8
Identities = 19/68 (27%), Positives = 37/68 (54%), Gaps = 6/68 (8%)
Frame = -1
Query: 550 LFTSLWNTKRRTRWIEYMPLTDLDTIPQYM-SLPGENLNNATIEAQSELINIDAPDL--- 383
+F + +N+K T E T +P++ ++PG N++ TIE ++ N++ DL
Sbjct: 176 MFDANYNSKELTSRSEGR--TGSGRLPEFFDNIPGTNVDFGTIEGENTPTNMETDDLGVG 233
Query: 382 --INSDLL 365
+N+D+L
Sbjct: 234 LDLNTDIL 241
>SB_8823| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1309
Score = 27.9 bits (59), Expect = 9.8
Identities = 10/35 (28%), Positives = 20/35 (57%)
Frame = +3
Query: 447 SPGKLIYCGIVSKSVSGIYSIHLVLRLVFHSEVNK 551
S GK++ C + +S+ + LV +++H +V K
Sbjct: 272 SGGKVVACDVTDESLKAVDFTSLVKEVIYHGKVTK 306
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,994,450
Number of Sequences: 59808
Number of extensions: 401447
Number of successful extensions: 1254
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 1094
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1249
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2131907602
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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