Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120379.Seq
         (781 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical prote...    27   0.49 
AJ438610-11|CAD27483.1|  765|Anopheles gambiae hypothetical prot...    27   0.49 
AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.            24   6.1  
AF080564-1|AAC31944.1|  372|Anopheles gambiae Sex combs reduced ...    23   8.0  

>AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical protein
           protein.
          Length = 1645

 Score = 27.5 bits (58), Expect = 0.49
 Identities = 22/77 (28%), Positives = 33/77 (42%), Gaps = 4/77 (5%)
 Frame = -3

Query: 281 SRIVNRNGRLFNADISNDVTSSLAFVPSSKSSQRPDCSDNTSD----DTSPCSTDYHEAS 114
           S IV+R  R FN   S+ VTS     P  ++    D    TS     DT    T +H  S
Sbjct: 536 SSIVSRR-RFFNTSASSSVTSEGTITPDLQTFDYHDEGGETSSVYSCDTEGYYTSFHVDS 594

Query: 113 ALDLVQSLDEISSCDSS 63
            L  ++  + ++   S+
Sbjct: 595 GLKTLKEEEPMTPLQST 611


>AJ438610-11|CAD27483.1|  765|Anopheles gambiae hypothetical protein
           protein.
          Length = 765

 Score = 27.5 bits (58), Expect = 0.49
 Identities = 22/77 (28%), Positives = 33/77 (42%), Gaps = 4/77 (5%)
 Frame = -3

Query: 281 SRIVNRNGRLFNADISNDVTSSLAFVPSSKSSQRPDCSDNTSD----DTSPCSTDYHEAS 114
           S IV+R  R FN   S+ VTS     P  ++    D    TS     DT    T +H  S
Sbjct: 537 SSIVSRR-RFFNTSASSSVTSEGTITPDLQTFDYHDEGGETSSVYSCDTEGYYTSFHVDS 595

Query: 113 ALDLVQSLDEISSCDSS 63
            L  ++  + ++   S+
Sbjct: 596 GLKTLKEEEPMTPLQST 612


>AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.
          Length = 3361

 Score = 23.8 bits (49), Expect = 6.1
 Identities = 10/33 (30%), Positives = 18/33 (54%)
 Frame = +3

Query: 498  IYSIHLVLRLVFHSEVNKTLIQCYHYCKLTMDR 596
            +Y    +LR   H E N+TL +  H+  ++ D+
Sbjct: 1940 LYDKQGILRFSLHKEHNETLDRVIHFTYVSDDK 1972


>AF080564-1|AAC31944.1|  372|Anopheles gambiae Sex combs reduced
           homeotic protein protein.
          Length = 372

 Score = 23.4 bits (48), Expect = 8.0
 Identities = 7/27 (25%), Positives = 15/27 (55%)
 Frame = -1

Query: 538 LWNTKRRTRWIEYMPLTDLDTIPQYMS 458
           +W   RR +W +   +  ++ +P +MS
Sbjct: 326 IWFQNRRMKWKKEHKMASMNIVPYHMS 352


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 712,064
Number of Sequences: 2352
Number of extensions: 13268
Number of successful extensions: 73
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 71
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 73
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 81497388
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)