Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120378.Seq
         (639 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X06905-1|CAA30009.1|  489|Tribolium castaneum protein ( Triboliu...    25   0.40 
U04271-2|AAA03709.1|  490|Tribolium castaneum alpha-amylase II p...    25   0.40 
U04271-1|AAA03708.1|  490|Tribolium castaneum alpha-amylase I pr...    25   0.40 
DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.        23   2.8  
DQ855505-1|ABH88192.1|  119|Tribolium castaneum chemosensory pro...    22   3.8  
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    22   5.0  
DQ855491-1|ABH88178.1|  144|Tribolium castaneum chemosensory pro...    21   8.7  
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    21   8.7  
AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface pro...    21   8.7  

>X06905-1|CAA30009.1|  489|Tribolium castaneum protein ( Tribolium
           castaneum mRNAfor alhpa amylase 3'region. ).
          Length = 489

 Score = 25.4 bits (53), Expect = 0.40
 Identities = 10/29 (34%), Positives = 15/29 (51%)
 Frame = -3

Query: 541 WTDGVRSLAVGGSNTTIFLSGSGYNLSSH 455
           W+DG + +A G  N        GY+L+ H
Sbjct: 404 WSDGNQQIAFGRGNKGFVAFTIGYDLNQH 432


>U04271-2|AAA03709.1|  490|Tribolium castaneum alpha-amylase II
           protein.
          Length = 490

 Score = 25.4 bits (53), Expect = 0.40
 Identities = 10/29 (34%), Positives = 15/29 (51%)
 Frame = -3

Query: 541 WTDGVRSLAVGGSNTTIFLSGSGYNLSSH 455
           W+DG + +A G  N        GY+L+ H
Sbjct: 405 WSDGNQQIAFGRGNKGFVAFTIGYDLNQH 433


>U04271-1|AAA03708.1|  490|Tribolium castaneum alpha-amylase I
           protein.
          Length = 490

 Score = 25.4 bits (53), Expect = 0.40
 Identities = 10/29 (34%), Positives = 15/29 (51%)
 Frame = -3

Query: 541 WTDGVRSLAVGGSNTTIFLSGSGYNLSSH 455
           W+DG + +A G  N        GY+L+ H
Sbjct: 405 WSDGNQQIAFGRGNKGFVAFTIGYDLNQH 433


>DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.
          Length = 414

 Score = 22.6 bits (46), Expect = 2.8
 Identities = 9/26 (34%), Positives = 16/26 (61%)
 Frame = -3

Query: 592 LWFQSRKTKIRRLALHSWTDGVRSLA 515
           +WF +R+ ++R+    + T  VRS A
Sbjct: 266 VWFSNRRARLRKQITSAATPLVRSYA 291


>DQ855505-1|ABH88192.1|  119|Tribolium castaneum chemosensory
           protein 19 protein.
          Length = 119

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 10/31 (32%), Positives = 16/31 (51%)
 Frame = -1

Query: 465 CLPIRANYSN*PVDKIRFSKICLRNNYNSVL 373
           C      Y N  VD+I  S+  L+N +N ++
Sbjct: 16  CEQYTTKYDNINVDEILASERLLKNYFNCIM 46


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 21.8 bits (44), Expect = 5.0
 Identities = 10/25 (40%), Positives = 15/25 (60%)
 Frame = +3

Query: 510 PTARLRTPSVQECRASLRILVFRLW 584
           PT +   PS+ +C A L ++V  LW
Sbjct: 34  PTNQKYYPSLAKCYACLLMVVKILW 58


>DQ855491-1|ABH88178.1|  144|Tribolium castaneum chemosensory
           protein 5 protein.
          Length = 144

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 11/25 (44%), Positives = 14/25 (56%)
 Frame = -1

Query: 444 YSN*PVDKIRFSKICLRNNYNSVLK 370
           Y N  VD+I  SK  L N  N +L+
Sbjct: 38  YDNVDVDRILHSKRLLLNYINCLLE 62


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
           adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 11/36 (30%), Positives = 17/36 (47%)
 Frame = +3

Query: 480 PDKNIVVLEPPTARLRTPSVQECRASLRILVFRLWN 587
           P +  + L   T+R   P+V +C A     +  LWN
Sbjct: 796 PPQFDIKLRNQTSRRGDPAVLQCEAKGEKPIGILWN 831


>AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface
           protein chaoptin protein.
          Length = 782

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 9/12 (75%), Positives = 10/12 (83%)
 Frame = -1

Query: 588 GSKVGKPKSAGL 553
           GSK GKP+SA L
Sbjct: 687 GSKPGKPRSAFL 698


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 160,693
Number of Sequences: 336
Number of extensions: 3622
Number of successful extensions: 14
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 16501678
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)