Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120378.Seq
         (639 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse tra...    25   2.0  
AY146737-1|AAO12097.1|  119|Anopheles gambiae odorant-binding pr...    24   4.7  
DQ370037-1|ABD18598.1|  121|Anopheles gambiae putative TIL domai...    23   6.2  

>U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse
           transcriptase protein.
          Length = 1049

 Score = 25.0 bits (52), Expect = 2.0
 Identities = 11/38 (28%), Positives = 21/38 (55%)
 Frame = -1

Query: 405 ICLRNNYNSVLKSCLVSH*SPFAPATTSLSTRVAPIER 292
           +C++  YN +++S L      ++P T S   R+  I+R
Sbjct: 886 MCIKAVYNCIVRSVLEYSCVVWSPTTASSIARIEAIQR 923


>AY146737-1|AAO12097.1|  119|Anopheles gambiae odorant-binding
           protein AgamOBP27 protein.
          Length = 119

 Score = 23.8 bits (49), Expect = 4.7
 Identities = 9/21 (42%), Positives = 14/21 (66%)
 Frame = +3

Query: 351 NVKRGNFSILNCSCFEGRFLK 413
           +++ GNFS+ N  CF   F+K
Sbjct: 32  SLRAGNFSVRNSLCFGECFVK 52


>DQ370037-1|ABD18598.1|  121|Anopheles gambiae putative TIL domain
           polypeptide protein.
          Length = 121

 Score = 23.4 bits (48), Expect = 6.2
 Identities = 9/26 (34%), Positives = 14/26 (53%)
 Frame = +3

Query: 351 NVKRGNFSILNCSCFEGRFLKNEFCR 428
           N++RG+       C EG F +N + R
Sbjct: 79  NIRRGDHLACTKHCVEGCFCRNGYVR 104


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 713,715
Number of Sequences: 2352
Number of extensions: 14996
Number of successful extensions: 35
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 35
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 35
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 62723250
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)