Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120378.Seq
         (639 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT003596-1|AAO39599.1|  401|Drosophila melanogaster GM21055p pro...    32   0.57 
AE014296-145|AAF47420.1|  394|Drosophila melanogaster CG13902-PA...    32   0.57 
AE013599-616|AAF59114.3| 4699|Drosophila melanogaster CG33087-PC...    31   1.7  
AE014296-2654|AAZ66062.1|  166|Drosophila melanogaster CG33687-P...    30   2.3  
DQ780943-1|ABH07113.1|  910|Drosophila melanogaster prominin pro...    28   9.3  
BT029279-1|ABK30916.1| 1066|Drosophila melanogaster IP13255p pro...    28   9.3  
BT001485-1|AAN71240.1|  339|Drosophila melanogaster LD22928p pro...    28   9.3  
AY118382-1|AAM48411.1| 1405|Drosophila melanogaster RE28066p pro...    28   9.3  
AE014297-968|AAF54400.2|  339|Drosophila melanogaster CG8208-PA,...    28   9.3  
AE014296-1309|AAF50523.1| 1405|Drosophila melanogaster CG7457-PA...    28   9.3  
AE013599-3867|AAM68313.1|  670|Drosophila melanogaster CG30164-P...    28   9.3  

>BT003596-1|AAO39599.1|  401|Drosophila melanogaster GM21055p
           protein.
          Length = 401

 Score = 32.3 bits (70), Expect = 0.57
 Identities = 25/70 (35%), Positives = 31/70 (44%)
 Frame = -3

Query: 553 ALHSWTDGVRSLAVGGSNTTIFLSGSGYNLSSHSCKLFKLASRQNSFFKNLPSKQLQFSI 374
           ALH W D    L V G+ T     GS Y     S +L K+    +  F   PSK  Q +I
Sbjct: 196 ALHKWLDLNYLLQVAGNRTVPIEIGSNYASDEWSQQLVKIRDFLSRQFGKEPSKAGQ-NI 254

Query: 373 EKLPRFTLIA 344
           E L +  L A
Sbjct: 255 EYLAQHELFA 264


>AE014296-145|AAF47420.1|  394|Drosophila melanogaster CG13902-PA
           protein.
          Length = 394

 Score = 32.3 bits (70), Expect = 0.57
 Identities = 25/70 (35%), Positives = 31/70 (44%)
 Frame = -3

Query: 553 ALHSWTDGVRSLAVGGSNTTIFLSGSGYNLSSHSCKLFKLASRQNSFFKNLPSKQLQFSI 374
           ALH W D    L V G+ T     GS Y     S +L K+    +  F   PSK  Q +I
Sbjct: 189 ALHKWLDLNYLLQVAGNRTVPIEIGSNYASDEWSQQLVKIRDFLSRQFGKEPSKAGQ-NI 247

Query: 373 EKLPRFTLIA 344
           E L +  L A
Sbjct: 248 EYLAQHELFA 257


>AE013599-616|AAF59114.3| 4699|Drosophila melanogaster CG33087-PC
           protein.
          Length = 4699

 Score = 30.7 bits (66), Expect = 1.7
 Identities = 11/33 (33%), Positives = 17/33 (51%)
 Frame = -1

Query: 549 CTLGPMVYVVLPLAAPTPRYFYRARDTTCLPIR 451
           C L     V+ P+A P P  ++   D  C+P+R
Sbjct: 23  CILSDHYSVIYPIAGPCPASYFTCNDGFCIPMR 55


>AE014296-2654|AAZ66062.1|  166|Drosophila melanogaster CG33687-PA
           protein.
          Length = 166

 Score = 30.3 bits (65), Expect = 2.3
 Identities = 16/48 (33%), Positives = 25/48 (52%), Gaps = 3/48 (6%)
 Frame = +3

Query: 366 NFSILNCSCFEGRFLKNEFCRLANLNSLHEWED---KLYPEPDKNIVV 500
           +F+ L C   +  F   E CR+  +N  H++ D   KLY  P  NI++
Sbjct: 13  SFTNLKCEMIDRTFGNFEMCRIKAVNRTHKYIDINLKLYILPINNIMI 60


>DQ780943-1|ABH07113.1|  910|Drosophila melanogaster prominin
           protein.
          Length = 910

 Score = 28.3 bits (60), Expect = 9.3
 Identities = 15/36 (41%), Positives = 22/36 (61%), Gaps = 2/36 (5%)
 Frame = -2

Query: 170 GWLSSLLESPILRLVAMLPTCAVCCG--SSLIEVFH 69
           G+++ +    IL LV ++ TCA CCG  S+  EV H
Sbjct: 121 GFIALMSVFAILALVPLIATCAWCCGRRSTQEEVDH 156


>BT029279-1|ABK30916.1| 1066|Drosophila melanogaster IP13255p
           protein.
          Length = 1066

 Score = 28.3 bits (60), Expect = 9.3
 Identities = 15/36 (41%), Positives = 22/36 (61%), Gaps = 2/36 (5%)
 Frame = -2

Query: 170 GWLSSLLESPILRLVAMLPTCAVCCG--SSLIEVFH 69
           G+++ +    IL LV ++ TCA CCG  S+  EV H
Sbjct: 122 GFIALMSVFAILALVPLIATCAWCCGRRSTQEEVDH 157


>BT001485-1|AAN71240.1|  339|Drosophila melanogaster LD22928p
           protein.
          Length = 339

 Score = 28.3 bits (60), Expect = 9.3
 Identities = 11/28 (39%), Positives = 14/28 (50%)
 Frame = +2

Query: 536 GPRVQGKPADFGFPTLEP*NVPKATLAS 619
           G R +GKP D   P  +P  +P   L S
Sbjct: 67  GKRAEGKPQDIAIPDFQPGKMPHCALPS 94


>AY118382-1|AAM48411.1| 1405|Drosophila melanogaster RE28066p protein.
          Length = 1405

 Score = 28.3 bits (60), Expect = 9.3
 Identities = 15/55 (27%), Positives = 26/55 (47%)
 Frame = -3

Query: 472  YNLSSHSCKLFKLASRQNSFFKNLPSKQLQFSIEKLPRFTLIAICSCHNIFVNSR 308
            YN+S H  K  +L     S   NL    L + +++LP+   +   +C N+  + R
Sbjct: 1278 YNISQHLAKAKQLQMLDISDNSNLSGTTLGYILDELPQLRDLLAVNCTNLLDDIR 1332


>AE014297-968|AAF54400.2|  339|Drosophila melanogaster CG8208-PA,
           isoform A protein.
          Length = 339

 Score = 28.3 bits (60), Expect = 9.3
 Identities = 11/28 (39%), Positives = 14/28 (50%)
 Frame = +2

Query: 536 GPRVQGKPADFGFPTLEP*NVPKATLAS 619
           G R +GKP D   P  +P  +P   L S
Sbjct: 67  GKRAEGKPQDIAIPDFQPGKMPHCALPS 94


>AE014296-1309|AAF50523.1| 1405|Drosophila melanogaster CG7457-PA
            protein.
          Length = 1405

 Score = 28.3 bits (60), Expect = 9.3
 Identities = 15/55 (27%), Positives = 26/55 (47%)
 Frame = -3

Query: 472  YNLSSHSCKLFKLASRQNSFFKNLPSKQLQFSIEKLPRFTLIAICSCHNIFVNSR 308
            YN+S H  K  +L     S   NL    L + +++LP+   +   +C N+  + R
Sbjct: 1278 YNISQHLAKAKQLQMLDISDNSNLSGTTLGYILDELPQLRDLLAVNCTNLLDDIR 1332


>AE013599-3867|AAM68313.1|  670|Drosophila melanogaster CG30164-PA
           protein.
          Length = 670

 Score = 28.3 bits (60), Expect = 9.3
 Identities = 15/36 (41%), Positives = 22/36 (61%), Gaps = 2/36 (5%)
 Frame = -2

Query: 170 GWLSSLLESPILRLVAMLPTCAVCCG--SSLIEVFH 69
           G+++ +    IL LV ++ TCA CCG  S+  EV H
Sbjct: 34  GFIALMSVFAILALVPLIATCAWCCGRRSTQEEVDH 69


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,225,626
Number of Sequences: 53049
Number of extensions: 661049
Number of successful extensions: 2200
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1984
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2200
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2682985500
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)