Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV120377.Seq
(861 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P24728 Cluster: Polyhedral envelope protein; n=6; Nucle... 112 9e-24
UniRef50_P17498 Cluster: Polyhedral envelope protein; n=7; Nucle... 71 3e-11
UniRef50_P24730 Cluster: Uncharacterized 25.1 kDa protein in PP3... 46 0.001
UniRef50_P36865 Cluster: Polyhedral envelope protein; n=2; Lyman... 38 0.25
UniRef50_A0EZ11 Cluster: Calyx/pep; n=2; Nucleopolyhedrovirus|Re... 37 0.57
UniRef50_Q0N3Y8 Cluster: CALYX/PEP; n=6; Nucleopolyhedrovirus|Re... 36 1.3
UniRef50_Q77LV8 Cluster: Calyx/pep; n=4; Nucleopolyhedrovirus|Re... 34 5.3
UniRef50_Q91BA2 Cluster: Calyx protein; n=2; Nucleopolyhedroviru... 33 7.0
UniRef50_A7FTJ8 Cluster: Helicase, UvrD/REP/exonuclease family p... 33 7.0
UniRef50_A7SYQ3 Cluster: Predicted protein; n=2; Nematostella ve... 33 9.3
UniRef50_A5KCJ6 Cluster: Putative uncharacterized protein; n=1; ... 33 9.3
>UniRef50_P24728 Cluster: Polyhedral envelope protein; n=6;
Nucleopolyhedrovirus|Rep: Polyhedral envelope protein -
Autographa californica nuclear polyhedrosis virus
(AcMNPV)
Length = 252
Score = 112 bits (270), Expect = 9e-24
Identities = 58/73 (79%), Positives = 60/73 (82%)
Frame = +2
Query: 257 QIFDALEKIRHQNDMLMXXXXXXXXXXXXXFLELSNVMTGVRNQNVQLLAALETAKDVIL 436
QIFDALEKIRHQNDMLM FLELSN+MTGVRNQNVQLLAALETAKDVIL
Sbjct: 151 QIFDALEKIRHQNDMLMSNVNQINLNQTNQFLELSNMMTGVRNQNVQLLAALETAKDVIL 210
Query: 437 TRLNTLLSEITDS 475
TRLNTLL+EITDS
Sbjct: 211 TRLNTLLAEITDS 223
Score = 100 bits (240), Expect = 4e-20
Identities = 43/45 (95%), Positives = 45/45 (100%)
Frame = +3
Query: 3 GSCHNTVKYMVDIYGASVLILRTPCSFADQLLSTFIANNYLCYFY 137
GSCHNTVKYMVDIYGA+VL+LRTPCSFADQLLSTFIANNYLCYFY
Sbjct: 53 GSCHNTVKYMVDIYGAAVLVLRTPCSFADQLLSTFIANNYLCYFY 97
>UniRef50_P17498 Cluster: Polyhedral envelope protein; n=7;
Nucleopolyhedrovirus|Rep: Polyhedral envelope protein -
Orgyia pseudotsugata multicapsid polyhedrosis virus
(OpMNPV)
Length = 297
Score = 71.3 bits (167), Expect = 3e-11
Identities = 36/70 (51%), Positives = 45/70 (64%)
Frame = +2
Query: 257 QIFDALEKIRHQNDMLMXXXXXXXXXXXXXFLELSNVMTGVRNQNVQLLAALETAKDVIL 436
QI DALEK+ Q+D+++ FLELSN + VR QN Q+LAALET KD IL
Sbjct: 129 QILDALEKLARQSDLVVNSLNQISLNQSNQFLELSNTLNTVRAQNAQILAALETTKDAIL 188
Query: 437 TRLNTLLSEI 466
TRLN L+ +I
Sbjct: 189 TRLNALVDDI 198
Score = 64.1 bits (149), Expect = 4e-09
Identities = 29/40 (72%), Positives = 34/40 (85%)
Frame = +3
Query: 12 HNTVKYMVDIYGASVLILRTPCSFADQLLSTFIANNYLCY 131
++TVKYMVDIYGA+VL LR P F+DQLL+TF ANNYL Y
Sbjct: 67 NSTVKYMVDIYGAAVLALRCPSLFSDQLLTTFTANNYLSY 106
Score = 54.0 bits (124), Expect = 5e-06
Identities = 34/91 (37%), Positives = 49/91 (53%)
Frame = +1
Query: 490 AHVR*ITEQLLEAINTMQQTQRNELNNTNSILTNLASSXXXXXXXXXXXXXXXENLAXXX 669
A ++ + ++LL+AIN++ QT R E+NNTNSILTNLASS E +
Sbjct: 207 AQLQELADKLLDAINSVAQTLRGEMNNTNSILTNLASSITNINSTLNNLLAAIEGIG--- 263
Query: 670 XXXXXXXXXNFNEADRQKLDLVHTLVNDIKN 762
+ADRQ L+ V +LV +I+N
Sbjct: 264 -----GDGGGLGDADRQALNEVLSLVTEIRN 289
>UniRef50_P24730 Cluster: Uncharacterized 25.1 kDa protein in
PP34-EXO intergenic region; n=5;
Nucleopolyhedrovirus|Rep: Uncharacterized 25.1 kDa
protein in PP34-EXO intergenic region - Autographa
californica nuclear polyhedrosis virus (AcMNPV)
Length = 219
Score = 46.0 bits (104), Expect = 0.001
Identities = 20/22 (90%), Positives = 20/22 (90%)
Frame = +2
Query: 794 MSDKTPTKKSGGHAMTLRERGV 859
MSDKTPTKK G HAMTLRERGV
Sbjct: 1 MSDKTPTKKGGSHAMTLRERGV 22
>UniRef50_P36865 Cluster: Polyhedral envelope protein; n=2;
Lymantria dispar MNPV|Rep: Polyhedral envelope protein -
Lymantria dispar multicapsid nuclear polyhedrosis virus
(LdMNPV)
Length = 312
Score = 38.3 bits (85), Expect = 0.25
Identities = 20/45 (44%), Positives = 25/45 (55%)
Frame = +1
Query: 469 RLVTRLDAHVR*ITEQLLEAINTMQQTQRNELNNTNSILTNLASS 603
RL+ LD H L A+ +Q + RN+L N NSIL NL SS
Sbjct: 210 RLIADLDGHFADFGSALDAALAQLQDSLRNDLTNINSILANLTSS 254
Score = 33.5 bits (73), Expect = 7.0
Identities = 18/68 (26%), Positives = 35/68 (51%), Gaps = 1/68 (1%)
Frame = +2
Query: 266 DALEKIRHQNDMLMXXXXXXXXXXXXXFLELSNVMTGVRNQNVQLLAAL-ETAKDVILTR 442
+ L++I QND+++ ELSN++ ++ QNV ++ L + D +L+
Sbjct: 144 ELLDRIVRQNDLILNGLNQLCLNHSNHHFELSNILNSIKLQNVNIINQLSQIFDDGVLSG 203
Query: 443 LNTLLSEI 466
L+ LS +
Sbjct: 204 LDEKLSRL 211
>UniRef50_A0EZ11 Cluster: Calyx/pep; n=2; Nucleopolyhedrovirus|Rep:
Calyx/pep - Ecotropis obliqua NPV
Length = 330
Score = 37.1 bits (82), Expect = 0.57
Identities = 20/56 (35%), Positives = 31/56 (55%)
Frame = +1
Query: 436 DQIKHVAFRNYRLVTRLDAHVR*ITEQLLEAINTMQQTQRNELNNTNSILTNLASS 603
+Q+ ++A L+ D + + L +A+ +Q + RNEL N NSIL NL SS
Sbjct: 217 NQLVNIAADLRSLLDNFDTKLNNFLDALNKALAQLQDSVRNELTNINSILNNLTSS 272
Score = 33.5 bits (73), Expect = 7.0
Identities = 15/68 (22%), Positives = 34/68 (50%)
Frame = +2
Query: 263 FDALEKIRHQNDMLMXXXXXXXXXXXXXFLELSNVMTGVRNQNVQLLAALETAKDVILTR 442
+D LE+I QND+++ LE++N + ++ QN+ + L D++ +
Sbjct: 159 YDILERISKQNDVIINGLSQLCINSSNQHLEINNALNTIKLQNITITGQLTQLIDLLENQ 218
Query: 443 LNTLLSEI 466
L + +++
Sbjct: 219 LVNIAADL 226
>UniRef50_Q0N3Y8 Cluster: CALYX/PEP; n=6; Nucleopolyhedrovirus|Rep:
CALYX/PEP - Clanis bilineata nucleopolyhedrosis virus
Length = 338
Score = 35.9 bits (79), Expect = 1.3
Identities = 21/55 (38%), Positives = 28/55 (50%)
Frame = +1
Query: 439 QIKHVAFRNYRLVTRLDAHVR*ITEQLLEAINTMQQTQRNELNNTNSILTNLASS 603
QI +A RL+ +D + L A+ +Q RNEL N N+IL NL SS
Sbjct: 230 QIATIASEIERLLGDVDRRFDQLLAALTAALAQLQDAVRNELTNVNAILNNLTSS 284
Score = 35.5 bits (78), Expect = 1.7
Identities = 18/67 (26%), Positives = 32/67 (47%)
Frame = +2
Query: 266 DALEKIRHQNDMLMXXXXXXXXXXXXXFLELSNVMTGVRNQNVQLLAALETAKDVILTRL 445
+ L+++ QND++M LE++N + +R QNV L D + ++
Sbjct: 172 ETLDRLVRQNDLIMSAVNQLNVSNSNQHLEITNQLNAIRLQNVNTSNQLTALADALEKQI 231
Query: 446 NTLLSEI 466
T+ SEI
Sbjct: 232 ATIASEI 238
>UniRef50_Q77LV8 Cluster: Calyx/pep; n=4; Nucleopolyhedrovirus|Rep:
Calyx/pep - Helicoverpa armigera nucleopolyhedrovirus G4
Length = 340
Score = 33.9 bits (74), Expect = 5.3
Identities = 22/72 (30%), Positives = 36/72 (50%), Gaps = 7/72 (9%)
Frame = +2
Query: 272 LEKIRHQNDMLMXXXXXXXXXXXXXFLELSNVMTGVRNQN-------VQLLAALETAKDV 430
LEKI QND+L+ F E++N ++ + QN +LL +++ +
Sbjct: 180 LEKISRQNDLLVSAVNQMTLTNTNNFAEINNSLSTISLQNSTLTGQVARLLESVDRQLPL 239
Query: 431 ILTRLNTLLSEI 466
+L RLN L SE+
Sbjct: 240 LLDRLNLLSSEV 251
>UniRef50_Q91BA2 Cluster: Calyx protein; n=2;
Nucleopolyhedrovirus|Rep: Calyx protein - Spodoptera
litura multicapsid nucleopolyhedrovirus (SpltMNPV)
Length = 344
Score = 33.5 bits (73), Expect = 7.0
Identities = 14/33 (42%), Positives = 20/33 (60%)
Frame = +3
Query: 24 KYMVDIYGASVLILRTPCSFADQLLSTFIANNY 122
K VD+ G S+L R+ C+ D LL+ F+A Y
Sbjct: 71 KVFVDLLGLSILCSRSNCNICDYLLTAFVAEVY 103
>UniRef50_A7FTJ8 Cluster: Helicase, UvrD/REP/exonuclease family
protein; n=4; Clostridium botulinum|Rep: Helicase,
UvrD/REP/exonuclease family protein - Clostridium
botulinum (strain ATCC 19397 / Type A)
Length = 855
Score = 33.5 bits (73), Expect = 7.0
Identities = 17/43 (39%), Positives = 25/43 (58%)
Frame = -1
Query: 477 NESVISESNVFNLVKITSLAVSNAARSCTF*LRTPVITLDNSK 349
N+ + S N+ L+KITSL+ S R T R P+IT+ +K
Sbjct: 737 NKEISSRDNLIELLKITSLSNSELDRMLTKYPRVPIITVHQAK 779
>UniRef50_A7SYQ3 Cluster: Predicted protein; n=2; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 129
Score = 33.1 bits (72), Expect = 9.3
Identities = 17/46 (36%), Positives = 20/46 (43%)
Frame = +2
Query: 698 ILTKPTDKNWTSCTLWLTISKITHGNVDNKISMSDKTPTKKSGGHA 835
I T P D +W S T W SK + M D P K+GG A
Sbjct: 53 IATSPVDGHWGSWTAWSACSKTCGDGTQTRTRMCD-DPAPKNGGSA 97
>UniRef50_A5KCJ6 Cluster: Putative uncharacterized protein; n=1;
Plasmodium vivax|Rep: Putative uncharacterized protein -
Plasmodium vivax
Length = 3459
Score = 33.1 bits (72), Expect = 9.3
Identities = 28/91 (30%), Positives = 41/91 (45%), Gaps = 1/91 (1%)
Frame = +1
Query: 151 HDHARDHVLLTA-DLVRDLGPGLDRGHVHRLPGKDGTNIRRAGKNSSSKRHVDEQRQPNK 327
H + R H T D G GL V +LP +IRR G + +SK + + + +
Sbjct: 1052 HGNPRGHPNTTVRDPPNQEGTGLIE-FVPKLPKWKTNSIRRLGVSKNSKIVITLKERIVE 1110
Query: 328 SQPN*SIFRIVQRDDGRAQSKRAAPRGVGNR 420
S N SIF R G S++ AP+ N+
Sbjct: 1111 STQNVSIFFGRARAKGEGSSRKEAPKEASNK 1141
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 709,621,353
Number of Sequences: 1657284
Number of extensions: 12213958
Number of successful extensions: 37305
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 35677
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 37248
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 76243001646
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -