Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120376.Seq
         (812 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF020851-1|AAC31864.1|  214|Anopheles gambiae unknown protein.         24   4.8  
AF020850-1|AAC31863.1|  214|Anopheles gambiae unknown protein.         24   4.8  
AF020849-1|AAC31862.1|  214|Anopheles gambiae unknown protein.         24   4.8  
AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.            24   6.4  

>AF020851-1|AAC31864.1|  214|Anopheles gambiae unknown protein.
          Length = 214

 Score = 24.2 bits (50), Expect = 4.8
 Identities = 10/17 (58%), Positives = 11/17 (64%)
 Frame = +3

Query: 288 STPHRSHSAHIRRRCRQ 338
           ST HR HS H  RR R+
Sbjct: 24  STKHRHHSRHHHRRRRE 40


>AF020850-1|AAC31863.1|  214|Anopheles gambiae unknown protein.
          Length = 214

 Score = 24.2 bits (50), Expect = 4.8
 Identities = 10/17 (58%), Positives = 11/17 (64%)
 Frame = +3

Query: 288 STPHRSHSAHIRRRCRQ 338
           ST HR HS H  RR R+
Sbjct: 24  STKHRHHSRHHHRRRRE 40


>AF020849-1|AAC31862.1|  214|Anopheles gambiae unknown protein.
          Length = 214

 Score = 24.2 bits (50), Expect = 4.8
 Identities = 10/17 (58%), Positives = 11/17 (64%)
 Frame = +3

Query: 288 STPHRSHSAHIRRRCRQ 338
           ST HR HS H  RR R+
Sbjct: 24  STKHRHHSRHHHRRRRE 40


>AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.
          Length = 3361

 Score = 23.8 bits (49), Expect = 6.4
 Identities = 10/28 (35%), Positives = 15/28 (53%)
 Frame = +3

Query: 645 FEYDPDNIMRHTLYPKPDEWPKSEHTEL 728
           FEYD    +   +YP   EW K E+ ++
Sbjct: 663 FEYDQHQRLSKIIYPNGAEW-KPEYAQV 689


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 843,406
Number of Sequences: 2352
Number of extensions: 17767
Number of successful extensions: 54
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 44
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 54
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 86071221
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)