Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120376.Seq
         (812 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z80215-1|CAB02268.2|  282|Caenorhabditis elegans Hypothetical pr...   131   5e-31
AF125965-2|AAL38961.1|  366|Caenorhabditis elegans Hypothetical ...    49   5e-06
Z68296-5|CAD59142.2| 1677|Caenorhabditis elegans Hypothetical pr...    29   4.0  
Z68296-4|CAA92591.3| 1838|Caenorhabditis elegans Hypothetical pr...    29   4.0  
EF473218-1|ABQ42570.1|  765|Caenorhabditis elegans Y55D9A.1c pro...    29   4.0  
EF473217-1|ABQ42569.1|  818|Caenorhabditis elegans Y55D9A.1b pro...    29   4.0  
AL032649-5|CAM82814.1|  765|Caenorhabditis elegans Hypothetical ...    29   4.0  
AL032649-2|CAC70120.1|  818|Caenorhabditis elegans Hypothetical ...    29   4.0  
AL032649-1|CAA21701.1|  816|Caenorhabditis elegans Hypothetical ...    29   4.0  
AC024761-4|AAF59466.2|  332|Caenorhabditis elegans Hypothetical ...    29   4.0  
Z68220-10|CAA92491.2| 1843|Caenorhabditis elegans Hypothetical p...    28   6.9  

>Z80215-1|CAB02268.2|  282|Caenorhabditis elegans Hypothetical
           protein C36B1.3 protein.
          Length = 282

 Score =  131 bits (317), Expect = 5e-31
 Identities = 56/91 (61%), Positives = 71/91 (78%), Gaps = 1/91 (1%)
 Frame = +3

Query: 516 DYGEADEILIIKLRKGQELKLRAYAKKGFGKEHAKWNPTAGVSFEYDPDNIMRHTLYPKP 695
           ++   +EILI+KLRKGQEL L+AY KKGFGKEHAKWNPT GV+FEYDPDN +RHT+YP  
Sbjct: 147 EFHNREEILIVKLRKGQELNLKAYVKKGFGKEHAKWNPTCGVAFEYDPDNALRHTIYPNV 206

Query: 696 DEWPKSEHTELNEDQYEADFNWE-RNQTNSF 785
           +EWP+S+H+ L ED  E +  +E  N+ N F
Sbjct: 207 EEWPRSDHSSLPEDSTEKEAPFEPDNKPNKF 237



 Score = 92.3 bits (219), Expect = 4e-19
 Identities = 39/69 (56%), Positives = 51/69 (73%)
 Frame = +1

Query: 250 VRANSTVLSDEFLAHRIGLIPLISDDVVDKIRYSRDCMCVDFCSECSVEFTLDVKCTDEQ 429
           +  N++VL DEF+AHR+GLIP ISD  V+K++Y+RDC C +FC ECS+ F L +KC DE 
Sbjct: 52  IETNTSVLHDEFIAHRMGLIPFISDYHVEKMQYTRDCECAEFCDECSIPFILQMKCKDEA 111

Query: 430 TRHVTTADL 456
           T  VTT  L
Sbjct: 112 TLAVTTEHL 120



 Score = 46.0 bits (104), Expect = 3e-05
 Identities = 18/30 (60%), Positives = 27/30 (90%)
 Frame = +3

Query: 99  MPYANQPSVHITELSDENVKFVVEDTELSV 188
           MPYANQP++ +TEL+++ +KFV+ DT+LSV
Sbjct: 1   MPYANQPNIEVTELTNDIIKFVLWDTDLSV 30



 Score = 42.7 bits (96), Expect = 3e-04
 Identities = 17/22 (77%), Positives = 21/22 (95%)
 Frame = +2

Query: 191 NSMRRVFIAETPTMAIDWVQLE 256
           NS+RRVF+AE PT+AIDWVQ+E
Sbjct: 32  NSLRRVFMAEVPTIAIDWVQIE 53


>AF125965-2|AAL38961.1|  366|Caenorhabditis elegans Hypothetical
           protein H43I07.2 protein.
          Length = 366

 Score = 48.8 bits (111), Expect = 5e-06
 Identities = 20/44 (45%), Positives = 31/44 (70%)
 Frame = +3

Query: 528 ADEILIIKLRKGQELKLRAYAKKGFGKEHAKWNPTAGVSFEYDP 659
           +D+IL+ KLR GQE++   +A KG G++HAK++P A  S+   P
Sbjct: 215 SDDILVAKLRPGQEIEASCHAVKGIGRDHAKFSPVATASYRLLP 258



 Score = 31.1 bits (67), Expect = 0.98
 Identities = 12/22 (54%), Positives = 17/22 (77%)
 Frame = +1

Query: 259 NSTVLSDEFLAHRIGLIPLISD 324
           N++V+ DE L HR+GL+PL  D
Sbjct: 104 NTSVIQDEVLCHRLGLLPLRVD 125



 Score = 29.9 bits (64), Expect = 2.3
 Identities = 12/21 (57%), Positives = 17/21 (80%)
 Frame = +2

Query: 191 NSMRRVFIAETPTMAIDWVQL 253
           N++RRV IAE PTMA++ + L
Sbjct: 81  NALRRVLIAEVPTMALEKIYL 101


>Z68296-5|CAD59142.2| 1677|Caenorhabditis elegans Hypothetical protein
            C46C2.1b protein.
          Length = 1677

 Score = 29.1 bits (62), Expect = 4.0
 Identities = 12/27 (44%), Positives = 17/27 (62%)
 Frame = +1

Query: 451  DLKSSDPRVVPVTSRHRDEARPIMVKQ 531
            DL+S DP V+ +  RHR E   ++ KQ
Sbjct: 1486 DLESEDPEVIQMIVRHRMEQHKLLEKQ 1512


>Z68296-4|CAA92591.3| 1838|Caenorhabditis elegans Hypothetical protein
            C46C2.1a protein.
          Length = 1838

 Score = 29.1 bits (62), Expect = 4.0
 Identities = 12/27 (44%), Positives = 17/27 (62%)
 Frame = +1

Query: 451  DLKSSDPRVVPVTSRHRDEARPIMVKQ 531
            DL+S DP V+ +  RHR E   ++ KQ
Sbjct: 1647 DLESEDPEVIQMIVRHRMEQHKLLEKQ 1673


>EF473218-1|ABQ42570.1|  765|Caenorhabditis elegans Y55D9A.1c
           protein.
          Length = 765

 Score = 29.1 bits (62), Expect = 4.0
 Identities = 13/39 (33%), Positives = 18/39 (46%)
 Frame = +3

Query: 633 AGVSFEYDPDNIMRHTLYPKPDEWPKSEHTELNEDQYEA 749
           +GVS  YD D +  H  Y   D  PK     L +  +E+
Sbjct: 234 SGVSNHYDQDGMFSHVYYSTQDTTPKHGSPSLRKQIFES 272


>EF473217-1|ABQ42569.1|  818|Caenorhabditis elegans Y55D9A.1b
           protein.
          Length = 818

 Score = 29.1 bits (62), Expect = 4.0
 Identities = 13/39 (33%), Positives = 18/39 (46%)
 Frame = +3

Query: 633 AGVSFEYDPDNIMRHTLYPKPDEWPKSEHTELNEDQYEA 749
           +GVS  YD D +  H  Y   D  PK     L +  +E+
Sbjct: 287 SGVSNHYDQDGMFSHVYYSTQDTTPKHGSPSLRKQIFES 325


>AL032649-5|CAM82814.1|  765|Caenorhabditis elegans Hypothetical
           protein Y55D9A.1c protein.
          Length = 765

 Score = 29.1 bits (62), Expect = 4.0
 Identities = 13/39 (33%), Positives = 18/39 (46%)
 Frame = +3

Query: 633 AGVSFEYDPDNIMRHTLYPKPDEWPKSEHTELNEDQYEA 749
           +GVS  YD D +  H  Y   D  PK     L +  +E+
Sbjct: 234 SGVSNHYDQDGMFSHVYYSTQDTTPKHGSPSLRKQIFES 272


>AL032649-2|CAC70120.1|  818|Caenorhabditis elegans Hypothetical
           protein Y55D9A.1b protein.
          Length = 818

 Score = 29.1 bits (62), Expect = 4.0
 Identities = 13/39 (33%), Positives = 18/39 (46%)
 Frame = +3

Query: 633 AGVSFEYDPDNIMRHTLYPKPDEWPKSEHTELNEDQYEA 749
           +GVS  YD D +  H  Y   D  PK     L +  +E+
Sbjct: 287 SGVSNHYDQDGMFSHVYYSTQDTTPKHGSPSLRKQIFES 325


>AL032649-1|CAA21701.1|  816|Caenorhabditis elegans Hypothetical
           protein Y55D9A.1a protein.
          Length = 816

 Score = 29.1 bits (62), Expect = 4.0
 Identities = 13/39 (33%), Positives = 18/39 (46%)
 Frame = +3

Query: 633 AGVSFEYDPDNIMRHTLYPKPDEWPKSEHTELNEDQYEA 749
           +GVS  YD D +  H  Y   D  PK     L +  +E+
Sbjct: 285 SGVSNHYDQDGMFSHVYYSTQDTTPKHGSPSLRKQIFES 323


>AC024761-4|AAF59466.2|  332|Caenorhabditis elegans Hypothetical
           protein Y38C1AA.6 protein.
          Length = 332

 Score = 29.1 bits (62), Expect = 4.0
 Identities = 12/35 (34%), Positives = 16/35 (45%)
 Frame = +1

Query: 331 VDKIRYSRDCMCVDFCSECSVEFTLDVKCTDEQTR 435
           +D  +Y+ D +C   CSEC         C D  TR
Sbjct: 79  IDNFKYNPDALCAGTCSECKTHTDKLRICVDCLTR 113


>Z68220-10|CAA92491.2| 1843|Caenorhabditis elegans Hypothetical
           protein T20D3.11 protein.
          Length = 1843

 Score = 28.3 bits (60), Expect = 6.9
 Identities = 20/84 (23%), Positives = 39/84 (46%), Gaps = 3/84 (3%)
 Frame = +3

Query: 519 YGEADEILIIKLRKGQELKLRAYAKKGFGKE--HAKWNPTAGVSFEYDPDNIMRHTLYPK 692
           YGE   IL    R+ ++   +   ++    E   + W+P      + +PD+I++  L+  
Sbjct: 3   YGELVHILDYYFRQLRDYSRQVQLERQADTEGRRSSWSPKHWFGVKGNPDDILKLPLH-F 61

Query: 693 PDEWP-KSEHTELNEDQYEADFNW 761
            D+ P  S H  LN   + ++ N+
Sbjct: 62  DDQLPTSSHHPPLNSSSHHSNHNY 85


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,546,052
Number of Sequences: 27780
Number of extensions: 409775
Number of successful extensions: 1023
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 982
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1020
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1998381620
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)