Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV120371.Seq
(747 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q9Y5K8 Cluster: Vacuolar ATP synthase subunit D; n=81; ... 137 3e-31
UniRef50_P32610 Cluster: Vacuolar ATP synthase subunit D; n=32; ... 94 4e-18
UniRef50_Q22F22 Cluster: V-type ATPase, D subunit family protein... 88 2e-16
UniRef50_Q9XGM1 Cluster: Vacuolar ATP synthase subunit D; n=9; E... 83 7e-15
UniRef50_Q4DZ24 Cluster: Vacuolar ATP synthase subunit D, putati... 80 5e-14
UniRef50_Q00YL0 Cluster: Vacuolar H+-ATPase V1 sector, subunit D... 80 7e-14
UniRef50_Q38BM3 Cluster: Vacuolar ATP synthase subunit D, putati... 79 1e-13
UniRef50_O59823 Cluster: Vacuolar ATP synthase subunit D; n=1; S... 78 3e-13
UniRef50_Q5CS23 Cluster: Vacuolar H-ATpase subunit D; n=7; Apico... 75 1e-12
UniRef50_A2DY20 Cluster: V-type ATPase, D subunit family protein... 75 2e-12
UniRef50_A7PSP8 Cluster: Chromosome chr6 scaffold_28, whole geno... 74 3e-12
UniRef50_Q4N502 Cluster: Vacuolar ATP synthase subunit D, putati... 72 1e-11
UniRef50_Q1HPT6 Cluster: Vacuolar ATP synthase subunit D; n=1; B... 69 2e-10
UniRef50_Q8SR82 Cluster: VACUOLAR ATP SYNTHASE SUBUNIT D; n=1; E... 66 7e-10
UniRef50_Q7QVH2 Cluster: GLP_21_44446_43640; n=1; Giardia lambli... 62 1e-08
UniRef50_Q58032 Cluster: V-type ATP synthase subunit D; n=14; Ar... 61 3e-08
UniRef50_Q8TUS9 Cluster: V-type ATP synthase subunit D; n=2; Eur... 58 2e-07
UniRef50_Q8GB09 Cluster: V-ATPase D-subunit; n=2; Thermotoga|Rep... 56 7e-07
UniRef50_A1Z8V7 Cluster: CG13167-PA; n=3; Sophophora|Rep: CG1316... 56 1e-06
UniRef50_Q2FQE2 Cluster: V-type ATPase, D subunit; n=1; Methanos... 51 3e-05
UniRef50_Q9RWG6 Cluster: V-type ATP synthase subunit D; n=2; Dei... 50 8e-05
UniRef50_Q6L1S9 Cluster: A1AO H+ ATPase subunit D; n=2; Thermopl... 49 1e-04
UniRef50_Q2Y4Y1 Cluster: V-type ATP synthase, subunit D; n=1; un... 49 1e-04
UniRef50_A7DQ39 Cluster: V-type ATPase, D subunit; n=1; Candidat... 49 1e-04
UniRef50_A0RXJ9 Cluster: Archaeal/vacuolar-type H-ATPase subunit... 48 2e-04
UniRef50_O87880 Cluster: V-type ATP synthase subunit D; n=2; The... 48 2e-04
UniRef50_A6NZH0 Cluster: Putative uncharacterized protein; n=1; ... 47 4e-04
UniRef50_Q8ZYI5 Cluster: H+-transporting ATP synthase subunit D;... 47 4e-04
UniRef50_A3H866 Cluster: V-type ATPase, D subunit; n=1; Caldivir... 47 4e-04
UniRef50_A3DNR4 Cluster: V-type ATPase, D subunit; n=1; Staphylo... 46 0.001
UniRef50_Q2FL45 Cluster: V-type ATPase, D subunit; n=1; Methanos... 46 0.001
UniRef50_A7HDG7 Cluster: V-type ATPase, D subunit; n=2; Anaeromy... 45 0.002
UniRef50_A3CT24 Cluster: V-type ATPase, D subunit; n=1; Methanoc... 45 0.002
UniRef50_Q60188 Cluster: V-type ATP synthase subunit D; n=10; Eu... 45 0.002
UniRef50_P43435 Cluster: V-type sodium ATP synthase subunit D (E... 45 0.002
UniRef50_Q2FU26 Cluster: V-type ATPase, D subunit; n=1; Methanos... 44 0.004
UniRef50_Q9HNE7 Cluster: V-type ATP synthase subunit D; n=8; cel... 44 0.004
UniRef50_UPI00015BAF15 Cluster: V-type ATPase, D subunit; n=1; I... 43 0.007
UniRef50_Q891P3 Cluster: V-type sodium ATP synthase subunit D; n... 42 0.012
UniRef50_Q184E4 Cluster: V-type sodium ATP synthase subunit D; n... 42 0.016
UniRef50_O83539 Cluster: V-type ATP synthase subunit D 2; n=1; T... 42 0.016
UniRef50_Q3J9F5 Cluster: H+-transporting two-sector ATPase, D su... 40 0.086
UniRef50_A5GCR4 Cluster: V-type ATPase, D subunit; n=1; Geobacte... 39 0.11
UniRef50_Q1FL04 Cluster: V-type ATPase, D subunit; n=6; Clostrid... 38 0.20
UniRef50_A2BKX4 Cluster: V-type ATP synthase subunit D; n=1; Hyp... 38 0.20
UniRef50_Q97CP8 Cluster: V-type ATP synthase subunit D; n=3; The... 38 0.20
UniRef50_P62017 Cluster: V-type ATP synthase subunit D; n=4; Sul... 37 0.46
UniRef50_A4RIJ6 Cluster: Putative uncharacterized protein; n=2; ... 35 2.4
UniRef50_Q23ND7 Cluster: Putative uncharacterized protein; n=2; ... 34 3.2
UniRef50_Q9YF38 Cluster: V-type ATP synthase subunit D; n=1; Aer... 34 3.2
UniRef50_Q5P1U0 Cluster: Putative uncharacterized protein; n=2; ... 34 4.3
UniRef50_UPI00006CCCFD Cluster: hypothetical protein TTHERM_0047... 33 7.5
UniRef50_A6R5H2 Cluster: Nucleolar protein NOP2; n=16; Fungi/Met... 33 9.9
>UniRef50_Q9Y5K8 Cluster: Vacuolar ATP synthase subunit D; n=81;
Eukaryota|Rep: Vacuolar ATP synthase subunit D - Homo
sapiens (Human)
Length = 247
Score = 137 bits (331), Expect = 3e-31
Identities = 63/85 (74%), Positives = 76/85 (89%)
Frame = +3
Query: 252 SAFSLAEAKFTTGDFNQVVLQNVTKAQIKIRSKKDNVAGVTLPIFESYQDGSDTYELAGL 431
+AFSLAEAKFT GDF+ V+QNV KAQ+KIR+KKDNVAGVTLP+FE Y +G+D+YEL GL
Sbjct: 65 AAFSLAEAKFTAGDFSTTVIQNVNKAQVKIRAKKDNVAGVTLPVFEHYHEGTDSYELTGL 124
Query: 432 ARGGQQLAKLKKNFQSAVKLLVELA 506
ARGG+QLAKLK+N+ AV+LLVELA
Sbjct: 125 ARGGEQLAKLKRNYAKAVELLVELA 149
Score = 99.5 bits (237), Expect = 8e-20
Identities = 49/69 (71%), Positives = 55/69 (79%)
Frame = +2
Query: 455 KAQEELPERCEAFGRVSVLQTSFVTLDEVIKITNRRVNAIEHVIIPRLERTLAYIISELD 634
K + + E ++ LQTSFVTLDE IKITNRRVNAIEHVIIPR+ERTLAYII+ELD
Sbjct: 133 KLKRNYAKAVELLVELASLQTSFVTLDEAIKITNRRVNAIEHVIIPRIERTLAYIITELD 192
Query: 635 ELEREEFYR 661
E EREEFYR
Sbjct: 193 EREREEFYR 201
Score = 93.1 bits (221), Expect = 7e-18
Identities = 46/65 (70%), Positives = 52/65 (80%)
Frame = +1
Query: 61 MSGKDRLAIFPSRGAQMLIKGRLAGAVKGHGLLKKKADALQVRFRMILSKIIETKTLMGE 240
MSGKDR+ IFPSR AQ ++K RL GA G LLKKK+DAL +RFR IL KIIETK LMGE
Sbjct: 1 MSGKDRIEIFPSRMAQTIMKARLKGAQTGRNLLKKKSDALTLRFRQILKKIIETKMLMGE 60
Query: 241 VMKEA 255
VM+EA
Sbjct: 61 VMREA 65
>UniRef50_P32610 Cluster: Vacuolar ATP synthase subunit D; n=32;
Eukaryota|Rep: Vacuolar ATP synthase subunit D -
Saccharomyces cerevisiae (Baker's yeast)
Length = 256
Score = 93.9 bits (223), Expect = 4e-18
Identities = 45/69 (65%), Positives = 54/69 (78%)
Frame = +2
Query: 455 KAQEELPERCEAFGRVSVLQTSFVTLDEVIKITNRRVNAIEHVIIPRLERTLAYIISELD 634
+A+E E ++ LQT+F+ LDEVIK+TNRRVNAIEHVIIPR E T+AYI SELD
Sbjct: 134 RAKEIYSRAVETLVELASLQTAFIILDEVIKVTNRRVNAIEHVIIPRTENTIAYINSELD 193
Query: 635 ELEREEFYR 661
EL+REEFYR
Sbjct: 194 ELDREEFYR 202
Score = 74.1 bits (174), Expect = 3e-12
Identities = 39/89 (43%), Positives = 60/89 (67%), Gaps = 2/89 (2%)
Frame = +3
Query: 246 ERSAFSLAEAKFTTGD-FNQVVLQNVTKAQIKIRSKKDNVAGVTLPIFESYQDGS-DTYE 419
+ +AFSLAE + TG+ V ++V+ A+ K+R++++NV+GV L FESY D + +
Sbjct: 62 QTAAFSLAEVSYATGENIGYQVQESVSTARFKVRARQENVSGVYLSQFESYIDPEINDFR 121
Query: 420 LAGLARGGQQLAKLKKNFQSAVKLLVELA 506
L GL RGGQQ+ + K+ + AV+ LVELA
Sbjct: 122 LTGLGRGGQQVQRAKEIYSRAVETLVELA 150
Score = 54.0 bits (124), Expect = 4e-06
Identities = 30/65 (46%), Positives = 43/65 (66%)
Frame = +1
Query: 61 MSGKDRLAIFPSRGAQMLIKGRLAGAVKGHGLLKKKADALQVRFRMILSKIIETKTLMGE 240
MSG +R +FP+R L+K +L GA +G+ LLK+K++AL RFR I +I + K MG
Sbjct: 1 MSG-NREQVFPTRMTLGLMKTKLKGANQGYSLLKRKSEALTKRFRDITKRIDDAKQKMGR 59
Query: 241 VMKEA 255
VM+ A
Sbjct: 60 VMQTA 64
>UniRef50_Q22F22 Cluster: V-type ATPase, D subunit family protein;
n=2; Oligohymenophorea|Rep: V-type ATPase, D subunit
family protein - Tetrahymena thermophila SB210
Length = 252
Score = 87.8 bits (208), Expect = 2e-16
Identities = 41/69 (59%), Positives = 51/69 (73%)
Frame = +2
Query: 455 KAQEELPERCEAFGRVSVLQTSFVTLDEVIKITNRRVNAIEHVIIPRLERTLAYIISELD 634
KA+E E +V+ LQTSF+TLDEVIK+TNRRVNA+EHV+IPR AYI ELD
Sbjct: 135 KAKERFKEALYLLVKVASLQTSFITLDEVIKVTNRRVNALEHVVIPRFMEVQAYINQELD 194
Query: 635 ELEREEFYR 661
E+ RE+F+R
Sbjct: 195 EMSREDFFR 203
Score = 57.2 bits (132), Expect = 4e-07
Identities = 34/93 (36%), Positives = 54/93 (58%), Gaps = 6/93 (6%)
Frame = +3
Query: 246 ERSAFSLAEAKFTTGDFNQVVLQNVTKAQIKIRSKKDNVAGVTLP---IFESYQDGSDT- 413
+++ LA+A + FN V ++V KA ++I +N+AGV LP I E+ +D DT
Sbjct: 59 QKAFIQLADAYWAADQFNTNVRESVKKALVRIEYSSENIAGVMLPNLNIRENIKDNEDTE 118
Query: 414 --YELAGLARGGQQLAKLKKNFQSAVKLLVELA 506
L GL +GG + K K+ F+ A+ LLV++A
Sbjct: 119 GNMGLLGLDKGGFSIQKAKERFKEALYLLVKVA 151
Score = 52.4 bits (120), Expect = 1e-05
Identities = 26/57 (45%), Positives = 35/57 (61%)
Frame = +1
Query: 85 IFPSRGAQMLIKGRLAGAVKGHGLLKKKADALQVRFRMILSKIIETKTLMGEVMKEA 255
I PSR + K + A KGH LLKKK DAL+ +FR I+ ++E K M E M++A
Sbjct: 5 ITPSRMTLAIYKAKTVSAKKGHELLKKKCDALKTKFRAIMIALLENKLKMDEEMQKA 61
>UniRef50_Q9XGM1 Cluster: Vacuolar ATP synthase subunit D; n=9;
Eukaryota|Rep: Vacuolar ATP synthase subunit D -
Arabidopsis thaliana (Mouse-ear cress)
Length = 261
Score = 83.0 bits (196), Expect = 7e-15
Identities = 39/86 (45%), Positives = 59/86 (68%), Gaps = 1/86 (1%)
Frame = +3
Query: 252 SAFSLAEAKFTTGD-FNQVVLQNVTKAQIKIRSKKDNVAGVTLPIFESYQDGSDTYELAG 428
S+F+L E K+ GD VVL+NV +A +K+RS+ +N+AGV LP F+ + +G +L G
Sbjct: 66 SSFALTEVKYVAGDNVKHVVLENVKEATLKVRSRTENIAGVKLPKFDHFSEGETKNDLTG 125
Query: 429 LARGGQQLAKLKKNFQSAVKLLVELA 506
LARGGQQ+ + + A+++LVELA
Sbjct: 126 LARGGQQVRACRVAYVKAIEVLVELA 151
Score = 81.0 bits (191), Expect = 3e-14
Identities = 37/59 (62%), Positives = 48/59 (81%)
Frame = +2
Query: 485 EAFGRVSVLQTSFVTLDEVIKITNRRVNAIEHVIIPRLERTLAYIISELDELEREEFYR 661
E ++ LQTSF+TLDE IK TNRRVNA+E+V+ P+LE T++YI ELDELERE+F+R
Sbjct: 145 EVLVELASLQTSFLTLDEAIKTTNRRVNALENVVKPKLENTISYIKGELDELEREDFFR 203
Score = 62.9 bits (146), Expect = 8e-09
Identities = 31/64 (48%), Positives = 45/64 (70%), Gaps = 1/64 (1%)
Frame = +1
Query: 61 MSGKD-RLAIFPSRGAQMLIKGRLAGAVKGHGLLKKKADALQVRFRMILSKIIETKTLMG 237
M+G++ RL + P+ ++K RL GA +GH LLKKK+DAL V+FR +L KI+ K MG
Sbjct: 1 MAGQNARLNVVPTVTMLGVMKARLVGATRGHALLKKKSDALTVQFRALLKKIVTAKESMG 60
Query: 238 EVMK 249
++MK
Sbjct: 61 DMMK 64
>UniRef50_Q4DZ24 Cluster: Vacuolar ATP synthase subunit D, putative;
n=3; Trypanosomatidae|Rep: Vacuolar ATP synthase subunit
D, putative - Trypanosoma cruzi
Length = 265
Score = 80.2 bits (189), Expect = 5e-14
Identities = 37/69 (53%), Positives = 51/69 (73%)
Frame = +2
Query: 455 KAQEELPERCEAFGRVSVLQTSFVTLDEVIKITNRRVNAIEHVIIPRLERTLAYIISELD 634
+A E+ E +++ LQ S+VTLD K+TNRRVNA+E V++PR++ TL+YI SELD
Sbjct: 142 EASEKFRETLRLLVKIASLQVSWVTLDLAQKVTNRRVNALEKVVVPRVQNTLSYITSELD 201
Query: 635 ELEREEFYR 661
E EREEF+R
Sbjct: 202 EQEREEFFR 210
Score = 53.2 bits (122), Expect = 7e-06
Identities = 28/61 (45%), Positives = 37/61 (60%)
Frame = +1
Query: 73 DRLAIFPSRGAQMLIKGRLAGAVKGHGLLKKKADALQVRFRMILSKIIETKTLMGEVMKE 252
+R PSR + + K RL GA KGH LLKKKADAL +R+R I+ + K M E ++
Sbjct: 4 NRYPALPSRMSLISFKTRLKGAQKGHSLLKKKADALAIRYRAIMGDLRNAKMEMVEQIRG 63
Query: 253 A 255
A
Sbjct: 64 A 64
Score = 48.8 bits (111), Expect = 1e-04
Identities = 28/93 (30%), Positives = 52/93 (55%), Gaps = 10/93 (10%)
Frame = +3
Query: 258 FSLAEAKFTTGDFNQVVLQNVTKAQIKIRSKKDNVAGVTLPIFESYQDGS-DTYEL---- 422
F++++A+F GD V +++ +R + +N+AGV +P F ++ S D L
Sbjct: 66 FTVSKAQFIAGDIGLAVQESLKLPTYAMRLRVENIAGVRVPSFHEREEHSGDLVTLDEKG 125
Query: 423 -----AGLARGGQQLAKLKKNFQSAVKLLVELA 506
AG+ RGG+QL + + F+ ++LLV++A
Sbjct: 126 RRIGTAGIGRGGEQLREASEKFRETLRLLVKIA 158
>UniRef50_Q00YL0 Cluster: Vacuolar H+-ATPase V1 sector, subunit D;
n=1; Ostreococcus tauri|Rep: Vacuolar H+-ATPase V1
sector, subunit D - Ostreococcus tauri
Length = 262
Score = 79.8 bits (188), Expect = 7e-14
Identities = 35/51 (68%), Positives = 44/51 (86%)
Frame = +2
Query: 509 LQTSFVTLDEVIKITNRRVNAIEHVIIPRLERTLAYIISELDELEREEFYR 661
LQT+FVTLDE I+ TNRRVNA+E+ + PRL+ T+ YI+ ELDELEREEF+R
Sbjct: 177 LQTAFVTLDEAIRTTNRRVNALENYVTPRLQNTVKYILGELDELEREEFFR 227
Score = 64.9 bits (151), Expect = 2e-09
Identities = 29/52 (55%), Positives = 38/52 (73%)
Frame = +1
Query: 118 KGRLAGAVKGHGLLKKKADALQVRFRMILSKIIETKTLMGEVMKEALSLWLK 273
+ RL GAV+GH LLKKKADAL +R R +L I+E KT +GE+M+EA W +
Sbjct: 43 QARLQGAVRGHALLKKKADALTLRHRAVLKAIVERKTTLGEIMREAHFSWTR 94
Score = 57.2 bits (132), Expect = 4e-07
Identities = 32/86 (37%), Positives = 51/86 (59%), Gaps = 3/86 (3%)
Frame = +3
Query: 258 FSLAEAKFTTGD-FNQVVLQNVTKAQIKIRSKKDNVAGVTLPIFESYQDGSD--TYELAG 428
FS A+ G+ VL V +A++++R+ ++NVAGV +P F G++ ELAG
Sbjct: 90 FSWTRARHAGGESVKHAVLDGVERAKVRVRASEENVAGVKIPKFFLRDTGAEQRRMELAG 149
Query: 429 LARGGQQLAKLKKNFQSAVKLLVELA 506
L RGG ++ + + F+ A+ LL ELA
Sbjct: 150 LGRGGARVREARGAFEKAMTLLSELA 175
>UniRef50_Q38BM3 Cluster: Vacuolar ATP synthase subunit D, putative;
n=3; Trypanosomatidae|Rep: Vacuolar ATP synthase subunit
D, putative - Trypanosoma brucei
Length = 283
Score = 79.0 bits (186), Expect = 1e-13
Identities = 37/69 (53%), Positives = 52/69 (75%)
Frame = +2
Query: 455 KAQEELPERCEAFGRVSVLQTSFVTLDEVIKITNRRVNAIEHVIIPRLERTLAYIISELD 634
+A++ E + F +++ LQ S++TLD K+T+RRVNA+E V+IPR+E TL YI SELD
Sbjct: 165 EARDAFRETLKLFVKIASLQVSWMTLDVAQKVTSRRVNALEKVVIPRMENTLNYISSELD 224
Query: 635 ELEREEFYR 661
E EREEF+R
Sbjct: 225 EQEREEFFR 233
Score = 51.6 bits (118), Expect = 2e-05
Identities = 25/59 (42%), Positives = 36/59 (61%)
Frame = +1
Query: 73 DRLAIFPSRGAQMLIKGRLAGAVKGHGLLKKKADALQVRFRMILSKIIETKTLMGEVMK 249
+R PSR + + K RL GA KGH LLKKKADAL R+R ++ ++ K + + +K
Sbjct: 4 NRYTALPSRMSLIAFKTRLKGAQKGHSLLKKKADALAFRYRTVMDELRRAKLEVADQIK 62
Score = 35.5 bits (78), Expect = 1.4
Identities = 23/76 (30%), Positives = 38/76 (50%)
Frame = +3
Query: 252 SAFSLAEAKFTTGDFNQVVLQNVTKAQIKIRSKKDNVAGVTLPIFESYQDGSDTYELAGL 431
S F++ +A+F GD + V +++ + + DNVAGV +P F + ++ D AG
Sbjct: 64 SYFTITQAQFIAGDISLAVQESLKLPTYTLTLRVDNVAGVRVPAF-TERNSRDESTAAG- 121
Query: 432 ARGGQQLAKLKKNFQS 479
G QQ K + S
Sbjct: 122 --GNQQNNKSRSGVNS 135
>UniRef50_O59823 Cluster: Vacuolar ATP synthase subunit D; n=1;
Schizosaccharomyces pombe|Rep: Vacuolar ATP synthase
subunit D - Schizosaccharomyces pombe (Fission yeast)
Length = 285
Score = 77.8 bits (183), Expect = 3e-13
Identities = 36/69 (52%), Positives = 53/69 (76%)
Frame = +2
Query: 455 KAQEELPERCEAFGRVSVLQTSFVTLDEVIKITNRRVNAIEHVIIPRLERTLAYIISELD 634
KA++ + E +++ Q++FV L +V+++TNRRVN+IEH+IIPRLE T+ YI SEL+
Sbjct: 135 KARQVYEKAVETLVQLASYQSAFVLLGDVLQMTNRRVNSIEHIIIPRLENTIKYIESELE 194
Query: 635 ELEREEFYR 661
ELERE+F R
Sbjct: 195 ELEREDFTR 203
Score = 74.9 bits (176), Expect = 2e-12
Identities = 37/87 (42%), Positives = 61/87 (70%), Gaps = 2/87 (2%)
Frame = +3
Query: 252 SAFSLAEAKFTTGD-FNQVVLQNVTKAQIKIRSKKDNVAGVTLPIFESYQDGS-DTYELA 425
+AFS+AE F G+ N + Q+V + ++++RSK++N++GV LP FE D S D ++L
Sbjct: 65 AAFSMAEVGFAMGNNINFEIQQSVKQPRLRVRSKQENISGVFLPTFEMNLDESIDDFQLT 124
Query: 426 GLARGGQQLAKLKKNFQSAVKLLVELA 506
GL +GGQQ+ K ++ ++ AV+ LV+LA
Sbjct: 125 GLGKGGQQIQKARQVYEKAVETLVQLA 151
Score = 57.6 bits (133), Expect = 3e-07
Identities = 30/65 (46%), Positives = 41/65 (63%)
Frame = +1
Query: 61 MSGKDRLAIFPSRGAQMLIKGRLAGAVKGHGLLKKKADALQVRFRMILSKIIETKTLMGE 240
M+ K R +FP+R +K RL GA GH LLK+K++AL+ RFR I+ I + K MG
Sbjct: 1 MASKQRENVFPTRMTLTTMKTRLKGAQTGHSLLKRKSEALKKRFREIVVNIEQAKQKMGR 60
Query: 241 VMKEA 255
VM+ A
Sbjct: 61 VMQIA 65
>UniRef50_Q5CS23 Cluster: Vacuolar H-ATpase subunit D; n=7;
Apicomplexa|Rep: Vacuolar H-ATpase subunit D -
Cryptosporidium parvum Iowa II
Length = 249
Score = 75.4 bits (177), Expect = 1e-12
Identities = 32/55 (58%), Positives = 48/55 (87%)
Frame = +2
Query: 497 RVSVLQTSFVTLDEVIKITNRRVNAIEHVIIPRLERTLAYIISELDELEREEFYR 661
+++ LQT+F +LDE IK+TNRRVNA+++V++P+LE + YI+ ELDE+EREEF+R
Sbjct: 140 KLASLQTAFFSLDEEIKMTNRRVNALQNVVLPKLEDGMNYILRELDEIEREEFFR 194
Score = 55.6 bits (128), Expect = 1e-06
Identities = 27/89 (30%), Positives = 52/89 (58%), Gaps = 2/89 (2%)
Frame = +3
Query: 246 ERSAFSLAEAKFTTGDFNQVVLQNVTKAQIKIRSKKDNVAGVTLPIFESYQDGSDTYELA 425
+ ++F+LA+A + GDF ++++ + + + +N+AGV LPIFE D + + E
Sbjct: 54 KEASFALAKATWAAGDFKDRIIESCKRPTVTMEVGTENIAGVRLPIFEMNVDNNSSTETC 113
Query: 426 --GLARGGQQLAKLKKNFQSAVKLLVELA 506
G+A GGQ + ++ + ++ LV+LA
Sbjct: 114 HIGVASGGQVIQSTREIYMKVLRDLVKLA 142
Score = 47.2 bits (107), Expect = 4e-04
Identities = 24/51 (47%), Positives = 35/51 (68%)
Frame = +1
Query: 103 AQMLIKGRLAGAVKGHGLLKKKADALQVRFRMILSKIIETKTLMGEVMKEA 255
A IK + GA +G+ LLK+K+DAL +FR +L +I+ETK +G +KEA
Sbjct: 6 ALQAIKLKSKGAKQGYDLLKRKSDALSNKFRGMLKEIVETKRSIGNDIKEA 56
>UniRef50_A2DY20 Cluster: V-type ATPase, D subunit family protein;
n=1; Trichomonas vaginalis G3|Rep: V-type ATPase, D
subunit family protein - Trichomonas vaginalis G3
Length = 246
Score = 74.9 bits (176), Expect = 2e-12
Identities = 34/69 (49%), Positives = 53/69 (76%)
Frame = +2
Query: 455 KAQEELPERCEAFGRVSVLQTSFVTLDEVIKITNRRVNAIEHVIIPRLERTLAYIISELD 634
KA+EE + ++ R++ LQT+F +D+V++ITNRRVNA+E V+IP+ + +A++ S LD
Sbjct: 128 KAREEFTKFLDSLVRLAELQTAFNVIDDVLRITNRRVNAMECVLIPKYQAAIAFVDSTLD 187
Query: 635 ELEREEFYR 661
E EREEF+R
Sbjct: 188 ENEREEFFR 196
Score = 61.3 bits (142), Expect = 2e-08
Identities = 31/83 (37%), Positives = 44/83 (53%)
Frame = +3
Query: 258 FSLAEAKFTTGDFNQVVLQNVTKAQIKIRSKKDNVAGVTLPIFESYQDGSDTYELAGLAR 437
F+ E KF D + V+Q+V + DN+AGV P F G++ +L GLAR
Sbjct: 62 FAYTEVKFVASDISPTVIQSVGNMPQLLLMTIDNIAGVRTPQFHRTNQGTENTDLLGLAR 121
Query: 438 GGQQLAKLKKNFQSAVKLLVELA 506
GGQQ+ K ++ F + LV LA
Sbjct: 122 GGQQIQKAREEFTKFLDSLVRLA 144
Score = 57.2 bits (132), Expect = 4e-07
Identities = 29/59 (49%), Positives = 41/59 (69%)
Frame = +1
Query: 82 AIFPSRGAQMLIKGRLAGAVKGHGLLKKKADALQVRFRMILSKIIETKTLMGEVMKEAL 258
AI P+R +K +L GA KG+ LLKKK+DAL ++FR +L +I +TK +G V K+AL
Sbjct: 3 AIIPTRMELQNLKEKLKGARKGYDLLKKKSDALTMKFRSLLREIRDTKLSVGNVAKDAL 61
>UniRef50_A7PSP8 Cluster: Chromosome chr6 scaffold_28, whole genome
shotgun sequence; n=2; Vitis vinifera|Rep: Chromosome
chr6 scaffold_28, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 150
Score = 74.1 bits (174), Expect = 3e-12
Identities = 36/57 (63%), Positives = 44/57 (77%)
Frame = +2
Query: 485 EAFGRVSVLQTSFVTLDEVIKITNRRVNAIEHVIIPRLERTLAYIISELDELEREEF 655
E ++ LQTSF+TLDE IK TNRRVNA+E+V+ PRLE T+ I ELDELERE+F
Sbjct: 90 EVLVELASLQTSFLTLDEAIKTTNRRVNALENVVKPRLENTINCIKGELDELEREDF 146
Score = 36.7 bits (81), Expect = 0.61
Identities = 23/67 (34%), Positives = 40/67 (59%)
Frame = +3
Query: 306 VLQNVTKAQIKIRSKKDNVAGVTLPIFESYQDGSDTYELAGLARGGQQLAKLKKNFQSAV 485
VL+NV A +K+RS+++NVAGV +P + S +R ++A + ++ A+
Sbjct: 34 VLENVQNASLKVRSRQENVAGVKVPPSSNI---SQKVTPRMPSRDWPEVAN-RSSYVKAI 89
Query: 486 KLLVELA 506
++LVELA
Sbjct: 90 EVLVELA 96
>UniRef50_Q4N502 Cluster: Vacuolar ATP synthase subunit D, putative;
n=3; Piroplasmida|Rep: Vacuolar ATP synthase subunit D,
putative - Theileria parva
Length = 238
Score = 72.1 bits (169), Expect = 1e-11
Identities = 31/51 (60%), Positives = 43/51 (84%)
Frame = +2
Query: 509 LQTSFVTLDEVIKITNRRVNAIEHVIIPRLERTLAYIISELDELEREEFYR 661
LQ SF+ L+E I++TNRR+NA+++V+IP ++R L YI ELDE+EREEFYR
Sbjct: 153 LQISFIILNEEIRMTNRRINALDNVLIPSIDRNLEYIRRELDEMEREEFYR 203
Score = 56.4 bits (130), Expect = 7e-07
Identities = 27/86 (31%), Positives = 51/86 (59%), Gaps = 1/86 (1%)
Frame = +3
Query: 252 SAFSLAEAKFTTGDFNQVVLQNVTKAQIKIRSKKDNVAGVTLPIFESYQDGS-DTYELAG 428
+ +SLA A ++ DF +V+++V + + ++ + +N+AGV LP+F D + D +
Sbjct: 66 ATYSLANAVWSAEDFKSLVIESVGRPSVTLKLRGENIAGVLLPVFSLQTDPTVDLFANLS 125
Query: 429 LARGGQQLAKLKKNFQSAVKLLVELA 506
L+ GG + +K +A+ +LVELA
Sbjct: 126 LSSGGSAIQSVKTTHLAALDILVELA 151
Score = 34.3 bits (75), Expect = 3.2
Identities = 21/59 (35%), Positives = 33/59 (55%), Gaps = 2/59 (3%)
Frame = +1
Query: 85 IFPSRGAQML--IKGRLAGAVKGHGLLKKKADALQVRFRMILSKIIETKTLMGEVMKEA 255
+ PSR L +K R A G+ LLK+K+DAL +F +L ++ K + E +K+A
Sbjct: 8 LIPSRMLVNLQNLKQRRHNAHLGYSLLKRKSDALTSKFHRLLRATVQGKERLVEGLKDA 66
>UniRef50_Q1HPT6 Cluster: Vacuolar ATP synthase subunit D; n=1;
Bombyx mori|Rep: Vacuolar ATP synthase subunit D -
Bombyx mori (Silk moth)
Length = 285
Score = 68.5 bits (160), Expect = 2e-10
Identities = 36/84 (42%), Positives = 56/84 (66%), Gaps = 2/84 (2%)
Frame = +3
Query: 261 SLAEAKFTTGDFNQVVLQNVTKAQIKIRSKKDNVAGVTLPIFESYQDGSDTYEL--AGLA 434
SLA KFT G+ N +VL+NV +AQI+++ +NV+GVT E+ ++ T L AGL
Sbjct: 68 SLAAIKFTNGESNALVLENVEQAQIRVQRITENVSGVTTTYLEAVEETGVTNALQYAGLG 127
Query: 435 RGGQQLAKLKKNFQSAVKLLVELA 506
GG + ++ KK+F+ AV L+++LA
Sbjct: 128 AGGHRTSEAKKSFREAVHLVLKLA 151
Score = 60.1 bits (139), Expect = 6e-08
Identities = 30/69 (43%), Positives = 45/69 (65%)
Frame = +2
Query: 455 KAQEELPERCEAFGRVSVLQTSFVTLDEVIKITNRRVNAIEHVIIPRLERTLAYIISELD 634
+A++ E +++ L+ + V LDE I+I R+VN IE VI+P+L T YI+ E+D
Sbjct: 135 EAKKSFREAVHLVLKLASLRKTCVLLDEAIRIAWRKVNGIEKVIMPKLRNTEHYILVEID 194
Query: 635 ELEREEFYR 661
E EREEF+R
Sbjct: 195 ECEREEFHR 203
Score = 39.1 bits (87), Expect = 0.11
Identities = 19/47 (40%), Positives = 30/47 (63%)
Frame = +1
Query: 115 IKGRLAGAVKGHGLLKKKADALQVRFRMILSKIIETKTLMGEVMKEA 255
IK R +G+ LLK+KA+ L+++ R + S++I T L+ MKEA
Sbjct: 19 IKRRQEHVDRGYELLKRKAEGLRIKGRQVASELIATHGLLSHKMKEA 65
>UniRef50_Q8SR82 Cluster: VACUOLAR ATP SYNTHASE SUBUNIT D; n=1;
Encephalitozoon cuniculi|Rep: VACUOLAR ATP SYNTHASE
SUBUNIT D - Encephalitozoon cuniculi
Length = 212
Score = 66.5 bits (155), Expect = 7e-10
Identities = 32/69 (46%), Positives = 47/69 (68%)
Frame = +2
Query: 455 KAQEELPERCEAFGRVSVLQTSFVTLDEVIKITNRRVNAIEHVIIPRLERTLAYIISELD 634
+ +E+ E E + L+ SF L+ ++ TNRRVNA+E IIPRLE T++YI+SELD
Sbjct: 129 ECREKFLEVLEMLVDLCALKNSFRVLNSILMSTNRRVNALEFNIIPRLENTVSYIVSELD 188
Query: 635 ELEREEFYR 661
E +R +F+R
Sbjct: 189 EQDRGDFFR 197
Score = 43.2 bits (97), Expect = 0.007
Identities = 20/47 (42%), Positives = 33/47 (70%)
Frame = +1
Query: 61 MSGKDRLAIFPSRGAQMLIKGRLAGAVKGHGLLKKKADALQVRFRMI 201
M+G +R+ +FP+R ++ + A KGH LLK+K+DAL+VR+R +
Sbjct: 1 MTG-ERIPVFPTRMNLRTMETKQKSAQKGHSLLKRKSDALKVRYRAV 46
Score = 41.9 bits (94), Expect = 0.016
Identities = 24/82 (29%), Positives = 45/82 (54%)
Frame = +3
Query: 258 FSLAEAKFTTGDFNQVVLQNVTKAQIKIRSKKDNVAGVTLPIFESYQDGSDTYELAGLAR 437
F L EA+F + ++ L K + +RS+ + V+GV+LP F ++ + + L R
Sbjct: 66 FRLTEAEFLGANL-KMFLYECQKQNVYVRSRVEQVSGVSLPFFSLQKE--NIQPILFLDR 122
Query: 438 GGQQLAKLKKNFQSAVKLLVEL 503
GQ L + ++ F +++LV+L
Sbjct: 123 SGQSLNECREKFLEVLEMLVDL 144
>UniRef50_Q7QVH2 Cluster: GLP_21_44446_43640; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_21_44446_43640 - Giardia lamblia
ATCC 50803
Length = 268
Score = 62.1 bits (144), Expect = 1e-08
Identities = 28/54 (51%), Positives = 40/54 (74%)
Frame = +2
Query: 500 VSVLQTSFVTLDEVIKITNRRVNAIEHVIIPRLERTLAYIISELDELEREEFYR 661
V+ LQ S L E +K+T+RRVNAIE++++P+LE T+ +I L+E EREEF R
Sbjct: 175 VAGLQRSCADLTEEVKVTSRRVNAIEYILLPKLENTIKWITDSLEETEREEFAR 228
Score = 48.4 bits (110), Expect = 2e-04
Identities = 27/82 (32%), Positives = 46/82 (56%)
Frame = +1
Query: 76 RLAIFPSRGAQMLIKGRLAGAVKGHGLLKKKADALQVRFRMILSKIIETKTLMGEVMKEA 255
RL + P++ M ++ R A + +GH LLKKK DA+ ++ R + S+++ + M +KEA
Sbjct: 5 RLNVLPTKMQLMALRQRYAASQRGHSLLKKKLDAMTLQLRSLNSQLVTAREAMVSALKEA 64
Query: 256 LSLWLKLSSQLETSTKLCYKML 321
+ L L+ + TS Y L
Sbjct: 65 -NWSLTLAQRSVTSGSDLYSTL 85
>UniRef50_Q58032 Cluster: V-type ATP synthase subunit D; n=14;
Archaea|Rep: V-type ATP synthase subunit D -
Methanococcus jannaschii
Length = 216
Score = 60.9 bits (141), Expect = 3e-08
Identities = 31/69 (44%), Positives = 43/69 (62%)
Frame = +2
Query: 455 KAQEELPERCEAFGRVSVLQTSFVTLDEVIKITNRRVNAIEHVIIPRLERTLAYIISELD 634
+A ++ E E ++ ++TS L E I T RRVNA+E+VIIPRL+ YI LD
Sbjct: 130 EAAKKFEEALELITELAEIETSIKLLAEEIITTKRRVNALEYVIIPRLKSLKKYISMRLD 189
Query: 635 ELEREEFYR 661
E+ERE F+R
Sbjct: 190 EMERENFFR 198
Score = 34.3 bits (75), Expect = 3.2
Identities = 18/55 (32%), Positives = 31/55 (56%)
Frame = +1
Query: 91 PSRGAQMLIKGRLAGAVKGHGLLKKKADALQVRFRMILSKIIETKTLMGEVMKEA 255
P+R + +K ++ A KGH LLK+K DAL + F I+ + + + + + EA
Sbjct: 6 PTRMELLKLKNKIKLAEKGHKLLKQKRDALIMEFFQIIEQASDLRDKVEAKLAEA 60
>UniRef50_Q8TUS9 Cluster: V-type ATP synthase subunit D; n=2;
Euryarchaeota|Rep: V-type ATP synthase subunit D -
Methanopyrus kandleri
Length = 232
Score = 58.0 bits (134), Expect = 2e-07
Identities = 29/69 (42%), Positives = 42/69 (60%)
Frame = +2
Query: 455 KAQEELPERCEAFGRVSVLQTSFVTLDEVIKITNRRVNAIEHVIIPRLERTLAYIISELD 634
+A E +A ++ ++ + + E I+ T RRVNA+EH++IPRLE T YI +LD
Sbjct: 133 EAMRAFTEAIDAVLELAEIEETLRLMAEEIERTKRRVNALEHIVIPRLENTEKYIEMKLD 192
Query: 635 ELEREEFYR 661
E ERE F R
Sbjct: 193 EQERENFVR 201
Score = 38.3 bits (85), Expect = 0.20
Identities = 24/81 (29%), Positives = 36/81 (44%)
Frame = +3
Query: 264 LAEAKFTTGDFNQVVLQNVTKAQIKIRSKKDNVAGVTLPIFESYQDGSDTYELAGLARGG 443
LA AK T G+ T +IK+ NV GV +PI E + + + G A
Sbjct: 69 LAAAKVTVGEIGVERASMATGEEIKVDVGSRNVMGVVVPIIERVSEDGGSKVVYGFADTS 128
Query: 444 QQLAKLKKNFQSAVKLLVELA 506
L + + F A+ ++ELA
Sbjct: 129 GALDEAMRAFTEAIDAVLELA 149
Score = 33.5 bits (73), Expect = 5.6
Identities = 19/57 (33%), Positives = 32/57 (56%)
Frame = +1
Query: 91 PSRGAQMLIKGRLAGAVKGHGLLKKKADALQVRFRMILSKIIETKTLMGEVMKEALS 261
P+R + ++ R+ A KGH LLK+K DAL + F ++ + E + + + EA S
Sbjct: 11 PTRMELLKLQDRIELAKKGHKLLKEKRDALIMEFFEMVKRASEIREQAVKKLMEAYS 67
>UniRef50_Q8GB09 Cluster: V-ATPase D-subunit; n=2; Thermotoga|Rep:
V-ATPase D-subunit - Thermotoga neapolitana
Length = 203
Score = 56.4 bits (130), Expect = 7e-07
Identities = 27/59 (45%), Positives = 38/59 (64%)
Frame = +2
Query: 485 EAFGRVSVLQTSFVTLDEVIKITNRRVNAIEHVIIPRLERTLAYIISELDELEREEFYR 661
E RV+V++ L K T +RVNA+E++IIP L+ T+ YI L+ELEREE +R
Sbjct: 135 ELVARVAVIENKVYRLAHEAKKTKKRVNALENLIIPHLKETIKYIQDTLEELEREELFR 193
>UniRef50_A1Z8V7 Cluster: CG13167-PA; n=3; Sophophora|Rep:
CG13167-PA - Drosophila melanogaster (Fruit fly)
Length = 373
Score = 55.6 bits (128), Expect = 1e-06
Identities = 24/37 (64%), Positives = 29/37 (78%)
Frame = +2
Query: 551 TNRRVNAIEHVIIPRLERTLAYIISELDELEREEFYR 661
TN RVNA+EHV+IP L+ T YI EL+E ERE+FYR
Sbjct: 165 TNMRVNALEHVVIPILQNTYNYICGELEEFEREDFYR 201
Score = 51.6 bits (118), Expect = 2e-05
Identities = 26/83 (31%), Positives = 44/83 (53%)
Frame = +3
Query: 258 FSLAEAKFTTGDFNQVVLQNVTKAQIKIRSKKDNVAGVTLPIFESYQDGSDTYELAGLAR 437
FS+A+A DF ++ A + +R + + GV L E G + LAGL+
Sbjct: 67 FSMAKANLLGADFKPQMVSRSHVATVSLRRTEIKIVGVKLNTLELETKGVGAFPLAGLSC 126
Query: 438 GGQQLAKLKKNFQSAVKLLVELA 506
GG Q+++++ ++ A+K LVE A
Sbjct: 127 GGMQVSRIRDSYTKALKALVEFA 149
Score = 44.8 bits (101), Expect = 0.002
Identities = 26/67 (38%), Positives = 42/67 (62%), Gaps = 1/67 (1%)
Frame = +1
Query: 61 MSGKDRLAIFPSRGAQMLIKGRLAGAVKGHGLLKKKADALQVRFRMILSKIIETKTLMG- 237
M+ +D L IFPSR +++K R+ A +G GLLK+K DA+ ++ R L +I + + G
Sbjct: 1 MAKRDILPIFPSRANSVIMKQRVLAARRGVGLLKRKRDAIDMKLRE-LRRIRFDQDMHGD 59
Query: 238 EVMKEAL 258
E M+ A+
Sbjct: 60 EAMRNAI 66
>UniRef50_Q2FQE2 Cluster: V-type ATPase, D subunit; n=1;
Methanospirillum hungatei JF-1|Rep: V-type ATPase, D
subunit - Methanospirillum hungatei (strain JF-1 / DSM
864)
Length = 225
Score = 51.2 bits (117), Expect = 3e-05
Identities = 22/37 (59%), Positives = 29/37 (78%)
Frame = +2
Query: 551 TNRRVNAIEHVIIPRLERTLAYIISELDELEREEFYR 661
T RRVNA+EH++IPRL RT+ YI L+E ERE+ +R
Sbjct: 167 TRRRVNALEHLVIPRLVRTMRYIEFRLEEREREDLFR 203
>UniRef50_Q9RWG6 Cluster: V-type ATP synthase subunit D; n=2;
Deinococcus|Rep: V-type ATP synthase subunit D -
Deinococcus radiodurans
Length = 224
Score = 49.6 bits (113), Expect = 8e-05
Identities = 27/72 (37%), Positives = 40/72 (55%)
Frame = +2
Query: 443 AAACKAQEELPERCEAFGRVSVLQTSFVTLDEVIKITNRRVNAIEHVIIPRLERTLAYII 622
A +A + EA +V+ +T + E IK T+RRVNA+E V+IP + + +I
Sbjct: 123 ARTIQASNDFGGVLEAIVKVAATETKLRRIGEEIKKTSRRVNALEQVVIPGIHDDIRFIR 182
Query: 623 SELDELEREEFY 658
S LD+ ERE Y
Sbjct: 183 SVLDQREREAGY 194
>UniRef50_Q6L1S9 Cluster: A1AO H+ ATPase subunit D; n=2;
Thermoplasmatales|Rep: A1AO H+ ATPase subunit D -
Picrophilus torridus
Length = 215
Score = 49.2 bits (112), Expect = 1e-04
Identities = 22/35 (62%), Positives = 27/35 (77%)
Frame = +2
Query: 551 TNRRVNAIEHVIIPRLERTLAYIISELDELEREEF 655
TNRR NAIE+++IPR+E L +I LDELERE F
Sbjct: 165 TNRRSNAIENIMIPRMEANLKFIKDHLDELERESF 199
>UniRef50_Q2Y4Y1 Cluster: V-type ATP synthase, subunit D; n=1;
uncultured archaeon|Rep: V-type ATP synthase, subunit D
- uncultured archaeon
Length = 218
Score = 49.2 bits (112), Expect = 1e-04
Identities = 24/55 (43%), Positives = 37/55 (67%)
Frame = +2
Query: 497 RVSVLQTSFVTLDEVIKITNRRVNAIEHVIIPRLERTLAYIISELDELEREEFYR 661
+++ L+ + L ++ T RRVNA+E+V+IPRL+ T YI L+E+ERE F R
Sbjct: 151 KLAELEEAVRNLAGEVEKTKRRVNALEYVMIPRLKTTRKYIQMRLEEMERENFTR 205
Score = 37.9 bits (84), Expect = 0.26
Identities = 19/57 (33%), Positives = 34/57 (59%)
Frame = +1
Query: 85 IFPSRGAQMLIKGRLAGAVKGHGLLKKKADALQVRFRMILSKIIETKTLMGEVMKEA 255
+ P+R + ++ R AVKGH LL++K DAL F ++ ++ + + + E +KEA
Sbjct: 11 VSPTRMELLRLRRREQLAVKGHDLLREKRDALIAEFLDVVGEVRDARMVAEEDLKEA 67
>UniRef50_A7DQ39 Cluster: V-type ATPase, D subunit; n=1; Candidatus
Nitrosopumilus maritimus SCM1|Rep: V-type ATPase, D
subunit - Candidatus Nitrosopumilus maritimus SCM1
Length = 209
Score = 49.2 bits (112), Expect = 1e-04
Identities = 26/70 (37%), Positives = 47/70 (67%)
Frame = +2
Query: 446 AACKAQEELPERCEAFGRVSVLQTSFVTLDEVIKITNRRVNAIEHVIIPRLERTLAYIIS 625
AA + +E LP+ C+A + + S +L + ++ T + +NA+E+VIIP+ ++ + +II+
Sbjct: 131 AAKQIKELLPKICKA----AEYENSIFSLAKALEKTQKLLNALENVIIPQYQQKVRFIIA 186
Query: 626 ELDELEREEF 655
L+E EREEF
Sbjct: 187 TLEEREREEF 196
>UniRef50_A0RXJ9 Cluster: Archaeal/vacuolar-type H-ATPase subunit D;
n=1; Cenarchaeum symbiosum|Rep: Archaeal/vacuolar-type
H-ATPase subunit D - Cenarchaeum symbiosum
Length = 121
Score = 48.4 bits (110), Expect = 2e-04
Identities = 25/70 (35%), Positives = 46/70 (65%)
Frame = +2
Query: 446 AACKAQEELPERCEAFGRVSVLQTSFVTLDEVIKITNRRVNAIEHVIIPRLERTLAYIIS 625
AA + +E LP C+A + + S +L + ++ T + +NA+E++IIP+ ++ + +I+S
Sbjct: 42 AAKQIKELLPGICKA----AEYENSIFSLAKALEKTQKLLNALENIIIPQYQQRIKFILS 97
Query: 626 ELDELEREEF 655
L+E EREEF
Sbjct: 98 TLEEREREEF 107
>UniRef50_O87880 Cluster: V-type ATP synthase subunit D; n=2;
Thermus thermophilus|Rep: V-type ATP synthase subunit D
- Thermus thermophilus (strain HB8 / ATCC 27634 / DSM
579)
Length = 223
Score = 48.0 bits (109), Expect = 2e-04
Identities = 26/73 (35%), Positives = 39/73 (53%)
Frame = +2
Query: 443 AAACKAQEELPERCEAFGRVSVLQTSFVTLDEVIKITNRRVNAIEHVIIPRLERTLAYII 622
A +A EA RV+ +T + E IK T RRVNA+E V+IP + + +I
Sbjct: 121 AYTLEASRAFRRYAEALIRVANTETRLKKIGEEIKKTTRRVNALEQVVIPGIRAQIRFIQ 180
Query: 623 SELDELEREEFYR 661
L++ ERE+ +R
Sbjct: 181 QVLEQREREDTFR 193
Score = 36.3 bits (80), Expect = 0.80
Identities = 21/62 (33%), Positives = 34/62 (54%)
Frame = +1
Query: 85 IFPSRGAQMLIKGRLAGAVKGHGLLKKKADALQVRFRMILSKIIETKTLMGEVMKEALSL 264
+ P+R + +G+L A KG LLKKK DAL F ++ + +E + + + KEA +
Sbjct: 4 VSPTRMNLLQRRGQLRLAQKGVDLLKKKRDALVAEFFGLVREAMEARKALDQAAKEAYAA 63
Query: 265 WL 270
L
Sbjct: 64 LL 65
>UniRef50_A6NZH0 Cluster: Putative uncharacterized protein; n=1;
Bacteroides capillosus ATCC 29799|Rep: Putative
uncharacterized protein - Bacteroides capillosus ATCC
29799
Length = 209
Score = 47.2 bits (107), Expect = 4e-04
Identities = 22/59 (37%), Positives = 36/59 (61%)
Frame = +2
Query: 485 EAFGRVSVLQTSFVTLDEVIKITNRRVNAIEHVIIPRLERTLAYIISELDELEREEFYR 661
E +++ ++TS L IK T +R NA+++++IP T+ +I L+E EREEF R
Sbjct: 134 ELVRQLAEVETSIYRLATAIKKTQKRANALKNIVIPGFNDTIRFITEALEEKEREEFTR 192
>UniRef50_Q8ZYI5 Cluster: H+-transporting ATP synthase subunit D;
n=4; Pyrobaculum|Rep: H+-transporting ATP synthase
subunit D - Pyrobaculum aerophilum
Length = 199
Score = 47.2 bits (107), Expect = 4e-04
Identities = 22/50 (44%), Positives = 33/50 (66%)
Frame = +2
Query: 512 QTSFVTLDEVIKITNRRVNAIEHVIIPRLERTLAYIISELDELEREEFYR 661
+T F TL ++ R +NAI++V+IPR++ + YI L+E EREEF R
Sbjct: 142 ETLFYTLLNRVREYQRMINAIDYVVIPRIKDNIQYIRLALEEAEREEFIR 191
>UniRef50_A3H866 Cluster: V-type ATPase, D subunit; n=1; Caldivirga
maquilingensis IC-167|Rep: V-type ATPase, D subunit -
Caldivirga maquilingensis IC-167
Length = 209
Score = 47.2 bits (107), Expect = 4e-04
Identities = 22/51 (43%), Positives = 35/51 (68%)
Frame = +2
Query: 509 LQTSFVTLDEVIKITNRRVNAIEHVIIPRLERTLAYIISELDELEREEFYR 661
L+ F TL ++ R +NAI++VI+PR+ ++A+I LDE+ERE+F R
Sbjct: 148 LENIFYTLLYRVREYQRMINAIDNVILPRIRDSIAFIRLALDEMEREDFVR 198
>UniRef50_A3DNR4 Cluster: V-type ATPase, D subunit; n=1;
Staphylothermus marinus F1|Rep: V-type ATPase, D subunit
- Staphylothermus marinus (strain ATCC 43588 / DSM 3639
/ F1)
Length = 209
Score = 46.0 bits (104), Expect = 0.001
Identities = 21/56 (37%), Positives = 35/56 (62%)
Frame = +2
Query: 485 EAFGRVSVLQTSFVTLDEVIKITNRRVNAIEHVIIPRLERTLAYIISELDELEREE 652
EA + + + + L I+ T R+VNA++++IIPRL T+ Y+ + +E EREE
Sbjct: 139 EAIIELGRAEQALIALGREIERTKRKVNALKYIIIPRLANTIRYLNMKFEEREREE 194
>UniRef50_Q2FL45 Cluster: V-type ATPase, D subunit; n=1;
Methanospirillum hungatei JF-1|Rep: V-type ATPase, D
subunit - Methanospirillum hungatei (strain JF-1 / DSM
864)
Length = 222
Score = 45.6 bits (103), Expect = 0.001
Identities = 21/69 (30%), Positives = 39/69 (56%)
Frame = +2
Query: 455 KAQEELPERCEAFGRVSVLQTSFVTLDEVIKITNRRVNAIEHVIIPRLERTLAYIISELD 634
+A E+ + R++ +T+ + I++ RRVNA++ +IIP L+ YI ++
Sbjct: 129 EAAEKFEAEMDMIIRLAETETTLRRIGNEIQMNRRRVNALDQIIIPELKEQAKYIRFSIE 188
Query: 635 ELEREEFYR 661
E ERE+ +R
Sbjct: 189 EREREDLFR 197
>UniRef50_A7HDG7 Cluster: V-type ATPase, D subunit; n=2;
Anaeromyxobacter|Rep: V-type ATPase, D subunit -
Anaeromyxobacter sp. Fw109-5
Length = 215
Score = 44.8 bits (101), Expect = 0.002
Identities = 23/75 (30%), Positives = 38/75 (50%)
Frame = +2
Query: 437 WWAAACKAQEELPERCEAFGRVSVLQTSFVTLDEVIKITNRRVNAIEHVIIPRLERTLAY 616
W A +A E E R++ + L E I+ T+RR+NA+E +++P L
Sbjct: 123 WGLAGTEAARRHEEALEVLLRIASRELHLARLGEEIQATSRRINALEQLVLPALTAESGR 182
Query: 617 IISELDELEREEFYR 661
I + L+E +RE+ R
Sbjct: 183 IEAALEERDREDVVR 197
>UniRef50_A3CT24 Cluster: V-type ATPase, D subunit; n=1;
Methanoculleus marisnigri JR1|Rep: V-type ATPase, D
subunit - Methanoculleus marisnigri (strain ATCC 35101 /
DSM 1498 / JR1)
Length = 214
Score = 44.8 bits (101), Expect = 0.002
Identities = 26/68 (38%), Positives = 38/68 (55%)
Frame = +2
Query: 458 AQEELPERCEAFGRVSVLQTSFVTLDEVIKITNRRVNAIEHVIIPRLERTLAYIISELDE 637
A + E EA + L+ L + I+ T RRVNA+E IIP LE +I ++ DE
Sbjct: 132 AADAYEELLEAIIATAELEGGIKHLLDDIEKTRRRVNALEFKIIPELEEARRFIENQRDE 191
Query: 638 LEREEFYR 661
+ER+E+ R
Sbjct: 192 MERQEWTR 199
>UniRef50_Q60188 Cluster: V-type ATP synthase subunit D; n=10;
Euryarchaeota|Rep: V-type ATP synthase subunit D -
Methanosarcina mazei (Methanosarcina frisia)
Length = 209
Score = 44.8 bits (101), Expect = 0.002
Identities = 23/51 (45%), Positives = 33/51 (64%)
Frame = +2
Query: 509 LQTSFVTLDEVIKITNRRVNAIEHVIIPRLERTLAYIISELDELEREEFYR 661
L+T+ L + I+ T RRVNA+E +IP L T+ YI L+E+ERE +R
Sbjct: 149 LETTMKRLLDEIEKTKRRVNALEFKVIPELIDTMKYIRFMLEEMERENTFR 199
>UniRef50_P43435 Cluster: V-type sodium ATP synthase subunit D (EC
3.6.3.15) (Na(+)- translocating ATPase subunit D); n=32;
Firmicutes|Rep: V-type sodium ATP synthase subunit D (EC
3.6.3.15) (Na(+)- translocating ATPase subunit D) -
Enterococcus hirae
Length = 230
Score = 44.8 bits (101), Expect = 0.002
Identities = 22/42 (52%), Positives = 30/42 (71%)
Frame = +2
Query: 536 EVIKITNRRVNAIEHVIIPRLERTLAYIISELDELEREEFYR 661
E I+ T RRVNA+E++ IP+LE T+ YI +L+E ER E R
Sbjct: 158 EEIEKTRRRVNALEYMTIPQLEETIYYIKMKLEENERAEVTR 199
Score = 35.5 bits (78), Expect = 1.4
Identities = 21/72 (29%), Positives = 38/72 (52%)
Frame = +1
Query: 76 RLAIFPSRGAQMLIKGRLAGAVKGHGLLKKKADALQVRFRMILSKIIETKTLMGEVMKEA 255
RL + P+R +K +L A +GH LLK K D L +F +++ K E + + + + A
Sbjct: 2 RLNVNPTRMELTRLKKQLTTATRGHKLLKDKQDELMRQFILLIRKNNELRQAIEKETQTA 61
Query: 256 LSLWLKLSSQLE 291
+ ++ S +E
Sbjct: 62 MKDFVLAKSTVE 73
>UniRef50_Q2FU26 Cluster: V-type ATPase, D subunit; n=1;
Methanospirillum hungatei JF-1|Rep: V-type ATPase, D
subunit - Methanospirillum hungatei (strain JF-1 / DSM
864)
Length = 209
Score = 44.0 bits (99), Expect = 0.004
Identities = 26/65 (40%), Positives = 40/65 (61%)
Frame = +2
Query: 458 AQEELPERCEAFGRVSVLQTSFVTLDEVIKITNRRVNAIEHVIIPRLERTLAYIISELDE 637
A E+L + A+ + +T E+ +I+ RRV A+EHV+IP LE ++A I + +E
Sbjct: 136 AYEKLVDAIIAYAGNAAALNHLIT--EIERIS-RRVKALEHVVIPSLEASIATITASREE 192
Query: 638 LEREE 652
LEREE
Sbjct: 193 LEREE 197
>UniRef50_Q9HNE7 Cluster: V-type ATP synthase subunit D; n=8;
cellular organisms|Rep: V-type ATP synthase subunit D -
Halobacterium salinarium (Halobacterium halobium)
Length = 224
Score = 44.0 bits (99), Expect = 0.004
Identities = 23/69 (33%), Positives = 38/69 (55%)
Frame = +2
Query: 455 KAQEELPERCEAFGRVSVLQTSFVTLDEVIKITNRRVNAIEHVIIPRLERTLAYIISELD 634
+A + E E+ + ++T+ + I+ T RRVNA+E ++P L YI +L+
Sbjct: 130 EAADAYEELLESIVLAAEVETAMKKMLTEIETTKRRVNALEFKLLPELHEGKEYIDQKLE 189
Query: 635 ELEREEFYR 661
E EREE +R
Sbjct: 190 EKEREEMFR 198
>UniRef50_UPI00015BAF15 Cluster: V-type ATPase, D subunit; n=1;
Ignicoccus hospitalis KIN4/I|Rep: V-type ATPase, D
subunit - Ignicoccus hospitalis KIN4/I
Length = 214
Score = 43.2 bits (97), Expect = 0.007
Identities = 20/69 (28%), Positives = 37/69 (53%)
Frame = +2
Query: 455 KAQEELPERCEAFGRVSVLQTSFVTLDEVIKITNRRVNAIEHVIIPRLERTLAYIISELD 634
KA +E E + + + S + ++ T R +NA+++ I+P +E + +I LD
Sbjct: 132 KAAKEFEEAMKYLNKAINSEMSIYRIMNELRRTQRLINAVKYSILPEIENNIKFIKRSLD 191
Query: 635 ELEREEFYR 661
+ +REEF R
Sbjct: 192 DQQREEFVR 200
>UniRef50_Q891P3 Cluster: V-type sodium ATP synthase subunit D; n=2;
Clostridia|Rep: V-type sodium ATP synthase subunit D -
Clostridium tetani
Length = 203
Score = 42.3 bits (95), Expect = 0.012
Identities = 18/40 (45%), Positives = 29/40 (72%)
Frame = +2
Query: 542 IKITNRRVNAIEHVIIPRLERTLAYIISELDELEREEFYR 661
+K T +R NA+E++ IP+ + T+ I S L+E ERE+F+R
Sbjct: 155 VKKTQKRANALENIQIPKFKATIKDISSVLEEKEREDFFR 194
>UniRef50_Q184E4 Cluster: V-type sodium ATP synthase subunit D;
n=15; Bacteria|Rep: V-type sodium ATP synthase subunit D
- Clostridium difficile (strain 630)
Length = 222
Score = 41.9 bits (94), Expect = 0.016
Identities = 23/63 (36%), Positives = 36/63 (57%)
Frame = +2
Query: 458 AQEELPERCEAFGRVSVLQTSFVTLDEVIKITNRRVNAIEHVIIPRLERTLAYIISELDE 637
A E + + R++ + S L + I+ T RRVNA+E+V+IP T+ YI +L+E
Sbjct: 132 AMEAFSDAMQPLLRLAESEKSAQLLAQEIEKTRRRVNALENVMIPNYIETIKYIAMKLEE 191
Query: 638 LER 646
ER
Sbjct: 192 NER 194
>UniRef50_O83539 Cluster: V-type ATP synthase subunit D 2; n=1;
Treponema pallidum|Rep: V-type ATP synthase subunit D 2
- Treponema pallidum
Length = 209
Score = 41.9 bits (94), Expect = 0.016
Identities = 25/74 (33%), Positives = 42/74 (56%), Gaps = 2/74 (2%)
Frame = +2
Query: 443 AAAC--KAQEELPERCEAFGRVSVLQTSFVTLDEVIKITNRRVNAIEHVIIPRLERTLAY 616
++AC +A+E+ + R++ +QT L ++ T RRVNA+ IIP++ T Y
Sbjct: 121 SSACMDRAREDFGLLLQTLTRMASVQTIVWRLASEMRKTQRRVNALSKQIIPQMCETCMY 180
Query: 617 IISELDELEREEFY 658
I S L+E +RE +
Sbjct: 181 IESVLEERDRESTF 194
>UniRef50_Q3J9F5 Cluster: H+-transporting two-sector ATPase, D
subunit; n=2; Gammaproteobacteria|Rep: H+-transporting
two-sector ATPase, D subunit - Nitrosococcus oceani
(strain ATCC 19707 / NCIMB 11848)
Length = 205
Score = 39.5 bits (88), Expect = 0.086
Identities = 21/73 (28%), Positives = 39/73 (53%)
Frame = +2
Query: 443 AAACKAQEELPERCEAFGRVSVLQTSFVTLDEVIKITNRRVNAIEHVIIPRLERTLAYII 622
A+ + + +L E R+ +TS + + T +RVNA+++ +IPR + + YI
Sbjct: 121 ASLDETRSKLVELAMVLARLGEAETSLRRMVAEQRKTQKRVNALKYNVIPRYQAAVRYIQ 180
Query: 623 SELDELEREEFYR 661
S L+E ER ++
Sbjct: 181 SALEEEERNALFQ 193
>UniRef50_A5GCR4 Cluster: V-type ATPase, D subunit; n=1; Geobacter
uraniumreducens Rf4|Rep: V-type ATPase, D subunit -
Geobacter uraniumreducens Rf4
Length = 207
Score = 39.1 bits (87), Expect = 0.11
Identities = 17/43 (39%), Positives = 28/43 (65%)
Frame = +2
Query: 533 DEVIKITNRRVNAIEHVIIPRLERTLAYIISELDELEREEFYR 661
DE++++T RRV +E ++P+L R + I + E ERE +YR
Sbjct: 155 DEIVRVT-RRVRVLEERVLPQLSRGIRSIAQYIGEREREAYYR 196
>UniRef50_Q1FL04 Cluster: V-type ATPase, D subunit; n=6;
Clostridiales|Rep: V-type ATPase, D subunit -
Clostridium phytofermentans ISDg
Length = 212
Score = 38.3 bits (85), Expect = 0.20
Identities = 20/55 (36%), Positives = 32/55 (58%)
Frame = +2
Query: 497 RVSVLQTSFVTLDEVIKITNRRVNAIEHVIIPRLERTLAYIISELDELEREEFYR 661
R+S+++ + L IK T +R NA++++ IP I + L+E EREEF R
Sbjct: 142 RLSMVENAAYRLATSIKKTQKRANALKNITIPYYTGLTREIANALEEKEREEFTR 196
>UniRef50_A2BKX4 Cluster: V-type ATP synthase subunit D; n=1;
Hyperthermus butylicus DSM 5456|Rep: V-type ATP synthase
subunit D - Hyperthermus butylicus (strain DSM 5456 /
JCM 9403)
Length = 220
Score = 38.3 bits (85), Expect = 0.20
Identities = 24/73 (32%), Positives = 38/73 (52%)
Frame = +2
Query: 443 AAACKAQEELPERCEAFGRVSVLQTSFVTLDEVIKITNRRVNAIEHVIIPRLERTLAYII 622
A +A+ ++ E E RV + + L +K T R +NA+++ IIP E ++ YI
Sbjct: 130 ARVYEARRKMLEALEDLIRVVESEAALRKLLRELKETQRLLNALDYSIIPSYESSIKYIK 189
Query: 623 SELDELEREEFYR 661
LD+ REE R
Sbjct: 190 LVLDDRMREEVVR 202
>UniRef50_Q97CP8 Cluster: V-type ATP synthase subunit D; n=3;
Thermoplasma|Rep: V-type ATP synthase subunit D -
Thermoplasma volcanium
Length = 209
Score = 38.3 bits (85), Expect = 0.20
Identities = 19/35 (54%), Positives = 23/35 (65%)
Frame = +2
Query: 551 TNRRVNAIEHVIIPRLERTLAYIISELDELEREEF 655
T RR NAIE+++IPRLE I LDE ER+ F
Sbjct: 158 TKRRSNAIENILIPRLEYQAKMIKMMLDERERDTF 192
>UniRef50_P62017 Cluster: V-type ATP synthase subunit D; n=4;
Sulfolobaceae|Rep: V-type ATP synthase subunit D -
Sulfolobus tokodaii
Length = 216
Score = 37.1 bits (82), Expect = 0.46
Identities = 19/69 (27%), Positives = 37/69 (53%)
Frame = +2
Query: 455 KAQEELPERCEAFGRVSVLQTSFVTLDEVIKITNRRVNAIEHVIIPRLERTLAYIISELD 634
K+++ + E + + ++++ +L ++ T R +NAI+ I+P + YI LD
Sbjct: 129 KSRDAIAEAFKKILELVEMESAIRSLSTELRKTQRLINAIDSYILPYYTSSAKYIKGVLD 188
Query: 635 ELEREEFYR 661
+ REEF R
Sbjct: 189 DRTREEFVR 197
>UniRef50_A4RIJ6 Cluster: Putative uncharacterized protein; n=2;
Sordariomycetes|Rep: Putative uncharacterized protein -
Magnaporthe grisea (Rice blast fungus) (Pyricularia
grisea)
Length = 422
Score = 34.7 bits (76), Expect = 2.4
Identities = 25/72 (34%), Positives = 35/72 (48%)
Frame = +3
Query: 285 TGDFNQVVLQNVTKAQIKIRSKKDNVAGVTLPIFESYQDGSDTYELAGLARGGQQLAKLK 464
TGD + V Q V KAQ S KD++AG +G +T LA L + G+ AK K
Sbjct: 324 TGDLEKYVKQAVDKAQSVAGSGKDSIAGSLEQYLGKIPNGPET--LAKLQQLGEVAAKHK 381
Query: 465 KNFQSAVKLLVE 500
+ +K +E
Sbjct: 382 DEGEKLLKETIE 393
>UniRef50_Q23ND7 Cluster: Putative uncharacterized protein; n=2;
Tetrahymena thermophila SB210|Rep: Putative
uncharacterized protein - Tetrahymena thermophila SB210
Length = 720
Score = 34.3 bits (75), Expect = 3.2
Identities = 18/42 (42%), Positives = 27/42 (64%), Gaps = 1/42 (2%)
Frame = +1
Query: 211 IIETKTLMGEVMKEALSLWLKLSSQLETSTK-LCYKMLPRLK 333
I E KTL +++K L + ++ SQ+E +K LCYK+L LK
Sbjct: 641 IAEEKTLHQKMLKNLLKSFQRIKSQIEIDSKQLCYKVLNLLK 682
>UniRef50_Q9YF38 Cluster: V-type ATP synthase subunit D; n=1;
Aeropyrum pernix|Rep: V-type ATP synthase subunit D -
Aeropyrum pernix
Length = 211
Score = 34.3 bits (75), Expect = 3.2
Identities = 14/40 (35%), Positives = 26/40 (65%)
Frame = +2
Query: 542 IKITNRRVNAIEHVIIPRLERTLAYIISELDELEREEFYR 661
+K T R +NA+++VI+P + + +I L++ RE+F R
Sbjct: 159 LKDTQRLINALDYVILPSYQNAIKFIKLVLEDRMREDFVR 198
>UniRef50_Q5P1U0 Cluster: Putative uncharacterized protein; n=2;
Azoarcus|Rep: Putative uncharacterized protein -
Azoarcus sp. (strain EbN1) (Aromatoleum aromaticum
(strain EbN1))
Length = 368
Score = 33.9 bits (74), Expect = 4.3
Identities = 15/39 (38%), Positives = 20/39 (51%)
Frame = -2
Query: 176 ASAFFLRRPWPFTAPARRPLINIWAPREGKIANLSFPDI 60
A RRP P + PA +P +IW P A +FPD+
Sbjct: 13 AGRLLARRPSPGSTPAAKPAPSIWQPVAAGAAAAAFPDL 51
>UniRef50_UPI00006CCCFD Cluster: hypothetical protein
TTHERM_00476520; n=1; Tetrahymena thermophila SB210|Rep:
hypothetical protein TTHERM_00476520 - Tetrahymena
thermophila SB210
Length = 999
Score = 33.1 bits (72), Expect = 7.5
Identities = 18/64 (28%), Positives = 33/64 (51%)
Frame = +1
Query: 136 AVKGHGLLKKKADALQVRFRMILSKIIETKTLMGEVMKEALSLWLKLSSQLETSTKLCYK 315
A+K +KK+ + LQ + + K+ +TK + E+ KEA+ L + E LC++
Sbjct: 699 AIKKFNKIKKEKEDLQQQLEEVSQKLQKTKQINQELTKEAIELNKEKLQMSEEFDNLCHQ 758
Query: 316 MLPR 327
+ R
Sbjct: 759 LEDR 762
>UniRef50_A6R5H2 Cluster: Nucleolar protein NOP2; n=16; Fungi/Metazoa
group|Rep: Nucleolar protein NOP2 - Ajellomyces
capsulatus NAm1
Length = 1980
Score = 32.7 bits (71), Expect = 9.9
Identities = 18/54 (33%), Positives = 31/54 (57%)
Frame = +3
Query: 243 NERSAFSLAEAKFTTGDFNQVVLQNVTKAQIKIRSKKDNVAGVTLPIFESYQDG 404
+E A S EAK TT + +VV + + ++ + + N+AG T+ +FE +DG
Sbjct: 1520 SEDEAISSTEAKLTTANIEEVV-EEQARLELNESAIQSNIAGHTMEVFE--EDG 1570
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 695,762,272
Number of Sequences: 1657284
Number of extensions: 13540328
Number of successful extensions: 33774
Number of sequences better than 10.0: 53
Number of HSP's better than 10.0 without gapping: 32661
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 33757
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 61323318355
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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