Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120369.Seq
         (821 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory recept...    33   0.002
AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory recept...    25   0.96 
EF592538-1|ABQ95984.1|  582|Tribolium castaneum beta-N-acetylglu...    24   1.7  
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    23   3.9  
DQ659251-1|ABG47449.1|  366|Tribolium castaneum chitinase 11 pro...    21   8.9  
AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory recept...    21   8.9  
AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1 ...    21   8.9  

>AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory receptor
           candidate 36 protein.
          Length = 355

 Score = 33.5 bits (73), Expect = 0.002
 Identities = 23/68 (33%), Positives = 41/68 (60%), Gaps = 7/68 (10%)
 Frame = -1

Query: 725 LYCTIYYWLSICCYAMWHYS-IA*FESSFMPSH-TIYF--EMTLIV---MIFENAMKRIQ 567
           L+  I+ +LS+ CY  + +S I   ES+ +    ++Y+  ++TLIV   +  +N  K +Q
Sbjct: 135 LFLYIFTYLSVTCYVTYAWSPIDHTESNIINDMCSLYYILQITLIVNYALALKNRFKELQ 194

Query: 566 KLLKVKTS 543
           K LK++TS
Sbjct: 195 KYLKIETS 202


>AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory receptor
           candidate 23 protein.
          Length = 291

 Score = 24.6 bits (51), Expect = 0.96
 Identities = 6/8 (75%), Positives = 8/8 (100%)
 Frame = -1

Query: 710 YYWLSICC 687
           YYWL++CC
Sbjct: 55  YYWLNVCC 62


>EF592538-1|ABQ95984.1|  582|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG3 protein.
          Length = 582

 Score = 23.8 bits (49), Expect = 1.7
 Identities = 13/33 (39%), Positives = 17/33 (51%)
 Frame = -3

Query: 219 RGPCLQPALTLLIVDLIPKPLRAVVPAALDVLH 121
           RG  +  A     VDLI K +  +  A L+VLH
Sbjct: 219 RGVMIDTARNFFPVDLIRKVVDGMAMAKLNVLH 251


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 22.6 bits (46), Expect = 3.9
 Identities = 8/24 (33%), Positives = 16/24 (66%)
 Frame = +1

Query: 271 VTSNNAAVLRSQNRMLAEEVNKKN 342
           +T  ++ VLR+  R+++  +NK N
Sbjct: 142 LTERSSLVLRNDFRLMSNNLNKNN 165


>DQ659251-1|ABG47449.1|  366|Tribolium castaneum chitinase 11
           protein.
          Length = 366

 Score = 21.4 bits (43), Expect = 8.9
 Identities = 8/17 (47%), Positives = 9/17 (52%)
 Frame = +2

Query: 341 MKEYQFWNEKSLHSFEN 391
           +K    WNE  LH  EN
Sbjct: 69  LKILDSWNEIDLHGLEN 85


>AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory receptor
           candidate 33 protein.
          Length = 321

 Score = 21.4 bits (43), Expect = 8.9
 Identities = 7/20 (35%), Positives = 11/20 (55%)
 Frame = +2

Query: 338 RMKEYQFWNEKSLHSFENFC 397
           R +   FW+  +L   EN+C
Sbjct: 123 RQQYEDFWHRYTLSFIENYC 142


>AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1
           protein protein.
          Length = 371

 Score = 21.4 bits (43), Expect = 8.9
 Identities = 6/13 (46%), Positives = 9/13 (69%)
 Frame = +2

Query: 359 WNEKSLHSFENFC 397
           W  +++HS E FC
Sbjct: 2   WPPEAVHSLERFC 14


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 191,225
Number of Sequences: 336
Number of extensions: 4161
Number of successful extensions: 15
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 22517873
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)