Bombyx BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120369.Seq
         (821 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_27572| Best HMM Match : Pox_A_type_inc (HMM E-Value=1.1e-19)        31   1.1  
SB_11775| Best HMM Match : Sulfotransfer_1 (HMM E-Value=0.33)          31   1.5  
SB_21448| Best HMM Match : No HMM Matches (HMM E-Value=.)              30   2.6  
SB_14926| Best HMM Match : No HMM Matches (HMM E-Value=.)              30   2.6  
SB_31179| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   6.0  
SB_20744| Best HMM Match : CH (HMM E-Value=0.92)                       28   8.0  

>SB_27572| Best HMM Match : Pox_A_type_inc (HMM E-Value=1.1e-19)
          Length = 3107

 Score = 31.1 bits (67), Expect = 1.1
 Identities = 17/30 (56%), Positives = 20/30 (66%), Gaps = 1/30 (3%)
 Frame = +1

Query: 322 EEVNKKNERISVLEREKSALIRELL-LQRN 408
           EEVNK   RI +LE EK AL  E L +Q+N
Sbjct: 893 EEVNKLQTRIEILEDEKQALHEEALRIQQN 922


>SB_11775| Best HMM Match : Sulfotransfer_1 (HMM E-Value=0.33)
          Length = 666

 Score = 30.7 bits (66), Expect = 1.5
 Identities = 11/21 (52%), Positives = 16/21 (76%)
 Frame = +3

Query: 15 LSAIEEAREWYLKQLTEVQEK 77
          +  IE AR+WY K++T VQE+
Sbjct: 1  MEVIERARKWYFKRITAVQEE 21



 Score = 30.7 bits (66), Expect = 1.5
 Identities = 11/31 (35%), Positives = 25/31 (80%)
 Frame = +1

Query: 316 LAEEVNKKNERISVLEREKSALIRELLLQRN 408
           L +++ +K ++I+ LE+EK+ALI++L + ++
Sbjct: 102 LKQQLEEKEQQIAQLEKEKTALIKDLFIAKS 132


>SB_21448| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 543

 Score = 29.9 bits (64), Expect = 2.6
 Identities = 12/35 (34%), Positives = 19/35 (54%)
 Frame = -1

Query: 770 STTYCTPYIVKDTFPLYCTIYYWLSICCYAMWHYS 666
           +T   T  ++  TFP   T+ YWL    Y ++H+S
Sbjct: 439 TTFIMTTTLIVFTFPFAITVLYWLLNSSYNIYHFS 473


>SB_14926| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1638

 Score = 29.9 bits (64), Expect = 2.6
 Identities = 11/31 (35%), Positives = 21/31 (67%)
 Frame = -1

Query: 395  KSSRMSADFSRSKTDILSFFLFTSSANIRFW 303
            + S++  DFSR KT++ S F F  +A++ ++
Sbjct: 1377 RQSKVELDFSRVKTELQSLFTFEHNASLEYF 1407


>SB_31179| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 283

 Score = 28.7 bits (61), Expect = 6.0
 Identities = 13/46 (28%), Positives = 26/46 (56%), Gaps = 3/46 (6%)
 Frame = -3

Query: 171 IPKPLRAVVPAALDVLHSKAPHKHPFCQ---RNAFSLELLSIVLNT 43
           +P  +R + P+    +H KA + +PFC+    N +  E  S++++T
Sbjct: 78  VPSFVRMLAPSGSLEVHEKAWNAYPFCRTEYSNTYMKEHFSVIIDT 123


>SB_20744| Best HMM Match : CH (HMM E-Value=0.92)
          Length = 1103

 Score = 28.3 bits (60), Expect = 8.0
 Identities = 15/59 (25%), Positives = 33/59 (55%), Gaps = 2/59 (3%)
 Frame = +1

Query: 271  VTSNNAAVLRSQNRMLAEEVNKKNERISVLEREKSALIRELL--LQRNRSKIIDNFT*N 441
            +TS  +   R Q  MLAEE++++   + V ++ +  ++R++   L++   K + +F  N
Sbjct: 1013 ITSLTSFSYRDQFSMLAEEMSRERYEVKVRQQAQEKVVRQMRRELRQKMEKEVQDFQAN 1071


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,578,049
Number of Sequences: 59808
Number of extensions: 465848
Number of successful extensions: 1146
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1018
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1144
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2299585728
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)