Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120369.Seq
         (821 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE013599-3943|AAF47262.1|  400|Drosophila melanogaster CG3880-PA...    56   4e-08
AY058783-1|AAL14012.1|  852|Drosophila melanogaster SD07766p pro...    30   3.3  
AE014296-461|AAZ66052.1| 1156|Drosophila melanogaster CG33232-PD...    30   3.3  
AE014296-460|AAF47652.2| 1156|Drosophila melanogaster CG33232-PC...    30   3.3  
AE014296-459|AAS64940.1| 1156|Drosophila melanogaster CG33232-PB...    30   3.3  
AE014296-458|AAS64939.1| 1266|Drosophila melanogaster CG33232-PA...    30   3.3  

>AE013599-3943|AAF47262.1|  400|Drosophila melanogaster CG3880-PA
           protein.
          Length = 400

 Score = 56.4 bits (130), Expect = 4e-08
 Identities = 26/65 (40%), Positives = 36/65 (55%)
 Frame = +3

Query: 3   LLQGLSAIEEAREWYLKQLTEVQEKMRYAGRMGAYVEPWSEAHQXXXXXXXXXXXXXNRQ 182
           LL GL  +E+AR+WY+ Q+  VQE+++Y GR+G   + WSE  Q             NR 
Sbjct: 251 LLFGLDGVEKARDWYMMQVLNVQEQIKYFGRLGTRFDQWSELQQERLNFQRARVFEANRS 310

Query: 183 LGALA 197
           L  LA
Sbjct: 311 LQILA 315



 Score = 29.5 bits (63), Expect = 5.8
 Identities = 11/33 (33%), Positives = 19/33 (57%)
 Frame = +2

Query: 164 FGIKSTIRSVSAGWRHGPLSLHMNLALPASSSP 262
           F    +++ ++  W HG   LH+NLA+P  + P
Sbjct: 305 FEANRSLQILADTWEHGGYPLHINLAVPTPTVP 337


>AY058783-1|AAL14012.1|  852|Drosophila melanogaster SD07766p
           protein.
          Length = 852

 Score = 30.3 bits (65), Expect = 3.3
 Identities = 13/35 (37%), Positives = 19/35 (54%)
 Frame = -3

Query: 486 NNNRAELCYMIPSYCVLRKIVNNFTSISL*QKFSN 382
           N   A+ C   P +CVL KI  N  ++   +KFS+
Sbjct: 275 NTKYAKRCAQRPEWCVLGKITQNMETVLFKEKFSD 309


>AE014296-461|AAZ66052.1| 1156|Drosophila melanogaster CG33232-PD,
           isoform D protein.
          Length = 1156

 Score = 30.3 bits (65), Expect = 3.3
 Identities = 13/35 (37%), Positives = 19/35 (54%)
 Frame = -3

Query: 486 NNNRAELCYMIPSYCVLRKIVNNFTSISL*QKFSN 382
           N   A+ C   P +CVL KI  N  ++   +KFS+
Sbjct: 579 NTKYAKRCAQRPEWCVLGKITQNMETVLFKEKFSD 613


>AE014296-460|AAF47652.2| 1156|Drosophila melanogaster CG33232-PC,
           isoform C protein.
          Length = 1156

 Score = 30.3 bits (65), Expect = 3.3
 Identities = 13/35 (37%), Positives = 19/35 (54%)
 Frame = -3

Query: 486 NNNRAELCYMIPSYCVLRKIVNNFTSISL*QKFSN 382
           N   A+ C   P +CVL KI  N  ++   +KFS+
Sbjct: 579 NTKYAKRCAQRPEWCVLGKITQNMETVLFKEKFSD 613


>AE014296-459|AAS64940.1| 1156|Drosophila melanogaster CG33232-PB,
           isoform B protein.
          Length = 1156

 Score = 30.3 bits (65), Expect = 3.3
 Identities = 13/35 (37%), Positives = 19/35 (54%)
 Frame = -3

Query: 486 NNNRAELCYMIPSYCVLRKIVNNFTSISL*QKFSN 382
           N   A+ C   P +CVL KI  N  ++   +KFS+
Sbjct: 579 NTKYAKRCAQRPEWCVLGKITQNMETVLFKEKFSD 613


>AE014296-458|AAS64939.1| 1266|Drosophila melanogaster CG33232-PA,
           isoform A protein.
          Length = 1266

 Score = 30.3 bits (65), Expect = 3.3
 Identities = 13/35 (37%), Positives = 19/35 (54%)
 Frame = -3

Query: 486 NNNRAELCYMIPSYCVLRKIVNNFTSISL*QKFSN 382
           N   A+ C   P +CVL KI  N  ++   +KFS+
Sbjct: 689 NTKYAKRCAQRPEWCVLGKITQNMETVLFKEKFSD 723


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 33,684,768
Number of Sequences: 53049
Number of extensions: 671459
Number of successful extensions: 1725
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1670
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1725
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3880595628
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)