Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120366.Seq
         (845 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q9W246 Cluster: CG4554-PA; n=3; Sophophora|Rep: CG4554-...    57   6e-07
UniRef50_UPI00015B6380 Cluster: PREDICTED: similar to CG4554-PA;...    44   0.004
UniRef50_Q5AJ60 Cluster: Potential U3 snoRNP protein Utp20p; n=2...    35   3.0  
UniRef50_A5KB28 Cluster: Putative uncharacterized protein; n=1; ...    34   3.9  
UniRef50_Q28PI6 Cluster: NAD-dependent epimerase/dehydratase; n=...    34   5.2  
UniRef50_Q69M19 Cluster: RNA-binding protein-like; n=2; Oryza sa...    34   5.2  

>UniRef50_Q9W246 Cluster: CG4554-PA; n=3; Sophophora|Rep: CG4554-PA -
            Drosophila melanogaster (Fruit fly)
          Length = 2733

 Score = 56.8 bits (131), Expect = 6e-07
 Identities = 33/84 (39%), Positives = 45/84 (53%)
 Frame = -2

Query: 505  DDVTGVLDVLLPPLVRELSTGDAAAPASIPKQXXXXXXXXXXXXIGEIEYSKLAAEAQTR 326
            + VT +   LL  LVRE+S  D    A + +Q              E+ Y KL    QT+
Sbjct: 2607 ESVTRLAPSLLQALVREMSEEDQNVDAELRQQALRVGSRLRKRIGAEV-YDKLRNAVQTK 2665

Query: 325  LNIKRAERKKLLLQEKVKDPERAA 254
            L  +RAER+K++ QEK+ DPERAA
Sbjct: 2666 LMARRAERRKVVAQEKIHDPERAA 2689



 Score = 39.9 bits (89), Expect = 0.079
 Identities = 25/89 (28%), Positives = 46/89 (51%), Gaps = 2/89 (2%)
 Frame = -3

Query: 795  VDLCAQYTT--TIRETCGTGNRRAVPNNKIVQSTSCFKLANSIEGESERTEGGGKLDTRW 622
            +DLCAQ T   T +E     ++  +    +++    F L      + E  E   K+   W
Sbjct: 2509 LDLCAQVTPGETAQEMIDELSKILLFVGHMLRDVP-FSLKQEKNDDEEEREPVNKISLTW 2567

Query: 621  ILFKLRKAVNVEVARAPTCINIRSSIFSM 535
            ++  +R  +N EVA+AP  I+IR+++F++
Sbjct: 2568 LIRNIRFLINKEVAKAPHDISIRTAMFTL 2596


>UniRef50_UPI00015B6380 Cluster: PREDICTED: similar to CG4554-PA; n=1;
            Nasonia vitripennis|Rep: PREDICTED: similar to CG4554-PA
            - Nasonia vitripennis
          Length = 2777

 Score = 44.4 bits (100), Expect = 0.004
 Identities = 29/80 (36%), Positives = 44/80 (55%), Gaps = 1/80 (1%)
 Frame = -2

Query: 490  VLDVLLPPLVRELST-GDAAAPASIPKQXXXXXXXXXXXXIGEIEYSKLAAEAQTRLNIK 314
            +L   + PL RE++T  ++ AP    +Q                EY++L ++AQ RL+ +
Sbjct: 2661 ILFHFMSPLAREMATIEESNAPL---RQLAKEVATMIKKKTSVEEYTRLLSQAQQRLDTR 2717

Query: 313  RAERKKLLLQEKVKDPERAA 254
            RAERKK+  Q+ V DPE AA
Sbjct: 2718 RAERKKVRSQQFVTDPELAA 2737



 Score = 40.7 bits (91), Expect = 0.045
 Identities = 22/63 (34%), Positives = 39/63 (61%)
 Frame = -3

Query: 717  KIVQSTSCFKLANSIEGESERTEGGGKLDTRWILFKLRKAVNVEVARAPTCINIRSSIFS 538
            ++++ TS  +   + E ES ++E    L   W+L KLRK +N+EV++AP    +R+S+F 
Sbjct: 2589 RLLKITSTEQENENKEAESSKSE----LSLLWLLKKLRKCINLEVSQAPRSTVVRTSVFK 2644

Query: 537  MWV 529
             W+
Sbjct: 2645 -WM 2646


>UniRef50_Q5AJ60 Cluster: Potential U3 snoRNP protein Utp20p; n=2;
           Saccharomycetales|Rep: Potential U3 snoRNP protein
           Utp20p - Candida albicans (Yeast)
          Length = 620

 Score = 34.7 bits (76), Expect = 3.0
 Identities = 18/39 (46%), Positives = 22/39 (56%)
 Frame = -2

Query: 370 GEIEYSKLAAEAQTRLNIKRAERKKLLLQEKVKDPERAA 254
           G  EY+KL +  +  +NIKR ERK    Q  V  PE AA
Sbjct: 550 GTTEYTKLYSNVKVNVNIKRQERKAKRAQMAVSAPEIAA 588


>UniRef50_A5KB28 Cluster: Putative uncharacterized protein; n=1;
           Plasmodium vivax|Rep: Putative uncharacterized protein -
           Plasmodium vivax
          Length = 747

 Score = 34.3 bits (75), Expect = 3.9
 Identities = 16/37 (43%), Positives = 19/37 (51%)
 Frame = +3

Query: 699 TSTELFYYLEQHGGYLFRMSLLWWSCTARIDPLGFTS 809
           T+ E   Y++QH GY    SLLW   T   DPL   S
Sbjct: 17  TTQEDLSYIQQHAGYALAKSLLWTIKTDTADPLALLS 53


>UniRef50_Q28PI6 Cluster: NAD-dependent epimerase/dehydratase; n=2;
           Rhodobacteraceae|Rep: NAD-dependent
           epimerase/dehydratase - Jannaschia sp. (strain CCS1)
          Length = 342

 Score = 33.9 bits (74), Expect = 5.2
 Identities = 22/67 (32%), Positives = 33/67 (49%), Gaps = 8/67 (11%)
 Frame = -2

Query: 613 QAEEGRERGGRPSTDLHQYKIVDILDVGPHGGRPGADDVTGVLDVLLPP--------LVR 458
           QA + R+R   P+ D    +++D+ DV     R G DD+ G+ +V   P        L+ 
Sbjct: 188 QARDDRKRVPAPAPDTRLVQMIDVRDVARFALRCGTDDLGGIWNVTGAPTPMGAVLSLIA 247

Query: 457 ELSTGDA 437
           ELS  DA
Sbjct: 248 ELSQSDA 254


>UniRef50_Q69M19 Cluster: RNA-binding protein-like; n=2; Oryza
           sativa|Rep: RNA-binding protein-like - Oryza sativa
           subsp. japonica (Rice)
          Length = 316

 Score = 33.9 bits (74), Expect = 5.2
 Identities = 15/45 (33%), Positives = 24/45 (53%)
 Frame = +3

Query: 630 CPIYRRPQFVRSLPLYYSLI*NTTSTELFYYLEQHGGYLFRMSLL 764
           CP+   P     +P+  S +     T+L Y+ E+H G +FR+ LL
Sbjct: 227 CPLRVSPSKTAIMPVNPSFLPQVNVTDLKYFCEEHFGQVFRLKLL 271


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 679,515,791
Number of Sequences: 1657284
Number of extensions: 11948840
Number of successful extensions: 32943
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 31542
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 32922
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 74193458591
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)