Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120366.Seq
         (845 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    22   5.3  
AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory recept...    22   7.0  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    22   7.0  

>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 22.2 bits (45), Expect = 5.3
 Identities = 9/26 (34%), Positives = 13/26 (50%)
 Frame = -2

Query: 589 GGRPSTDLHQYKIVDILDVGPHGGRP 512
           GG P   +H  +++D L  G    RP
Sbjct: 691 GGTPYVGVHSSELLDFLKSGNRLARP 716



 Score = 21.8 bits (44), Expect = 7.0
 Identities = 14/42 (33%), Positives = 20/42 (47%), Gaps = 2/42 (4%)
 Frame = -3

Query: 789 LCAQYTTTIRETCGTGNRRAVPNNK--IVQSTSCFKLANSIE 670
           LC  +      +CG GNR  + + K  I +  S   L NSI+
Sbjct: 35  LCQSFRKQNSSSCGNGNRCDLWSEKFPIQELKSQESLLNSIQ 76



 Score = 21.4 bits (43), Expect = 9.3
 Identities = 7/10 (70%), Positives = 8/10 (80%)
 Frame = -3

Query: 648 GGGKLDTRWI 619
           GGGKL  RW+
Sbjct: 652 GGGKLPVRWM 661


>AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory receptor
           candidate 27 protein.
          Length = 346

 Score = 21.8 bits (44), Expect = 7.0
 Identities = 9/32 (28%), Positives = 16/32 (50%)
 Frame = -3

Query: 657 RTEGGGKLDTRWILFKLRKAVNVEVARAPTCI 562
           RTE   K+    ++F+ +   N  +   PTC+
Sbjct: 103 RTENQKKIFDESVIFERKVMKNFAILIIPTCV 134


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 21.8 bits (44), Expect = 7.0
 Identities = 7/14 (50%), Positives = 11/14 (78%)
 Frame = +3

Query: 516 RPPCGPTSRISTIL 557
           +PP GP+S +S +L
Sbjct: 535 QPPGGPSSHVSAVL 548


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 156,777
Number of Sequences: 336
Number of extensions: 2958
Number of successful extensions: 10
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 23348025
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)