Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120366.Seq
         (845 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY358264-1|AAQ88631.1|  313|Homo sapiens WD40 protein protein.         32   3.0  
AJ006778-1|CAA07243.1| 2785|Homo sapiens DRIM protein protein.         32   3.0  
AF072718-1|AAG35208.1|  879|Homo sapiens Key-1A6 protein protein.      32   3.0  

>AY358264-1|AAQ88631.1|  313|Homo sapiens WD40 protein protein.
          Length = 313

 Score = 31.9 bits (69), Expect = 3.0
 Identities = 14/40 (35%), Positives = 22/40 (55%)
 Frame = +1

Query: 574 CSGDLHVHGLPQLEQDPTRVQFTAALSSFALSLYTIR*FE 693
           C G +H+ G P    DP  + F A ++S  + LY +R F+
Sbjct: 141 CQGLMHLQGKPVCSFDPEGLIFAAGVNSEMVKLYDLRSFD 180


>AJ006778-1|CAA07243.1| 2785|Homo sapiens DRIM protein protein.
          Length = 2785

 Score = 31.9 bits (69), Expect = 3.0
 Identities = 29/87 (33%), Positives = 38/87 (43%), Gaps = 1/87 (1%)
 Frame = -2

Query: 511  GADDVTGVLDVLLPPLVREL-STGDAAAPASIPKQXXXXXXXXXXXXIGEIEYSKLAAEA 335
            G D V   L +++ PL REL ST     P  + K             +G   +S   A  
Sbjct: 2659 GIDKVKPYLPMIIAPLFRELNSTYSEQDP--LLKNLSQEIIELLKKLVGLESFSLAFASV 2716

Query: 334  QTRLNIKRAERKKLLLQEKVKDPERAA 254
            Q + N KRA RKK    E V +P+ AA
Sbjct: 2717 QKQANEKRALRKKRKALEFVTNPDIAA 2743


>AF072718-1|AAG35208.1|  879|Homo sapiens Key-1A6 protein protein.
          Length = 879

 Score = 31.9 bits (69), Expect = 3.0
 Identities = 29/87 (33%), Positives = 38/87 (43%), Gaps = 1/87 (1%)
 Frame = -2

Query: 511  GADDVTGVLDVLLPPLVREL-STGDAAAPASIPKQXXXXXXXXXXXXIGEIEYSKLAAEA 335
            G D V   L +++ PL REL ST     P  + K             +G   +S   A  
Sbjct: 753  GIDKVKPYLPMIIAPLFRELNSTYSEQDP--LLKNLSQEIIELLKKLVGLESFSLAFASV 810

Query: 334  QTRLNIKRAERKKLLLQEKVKDPERAA 254
            Q + N KRA RKK    E V +P+ AA
Sbjct: 811  QKQANEKRALRKKRKALEFVTNPDIAA 837


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 98,918,220
Number of Sequences: 237096
Number of extensions: 1807167
Number of successful extensions: 4124
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3928
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4124
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10705443456
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)