Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120365.Seq
         (836 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292375-1|CAL23187.2|  311|Tribolium castaneum gustatory recept...    26   0.32 
U14732-1|AAC46491.1|  322|Tribolium castaneum fushi-tarazu protein.    25   0.98 
AY043292-2|AAK96032.1|  290|Tribolium castaneum homeodomain tran...    25   0.98 
AF321227-1|AAK16421.1|  290|Tribolium castaneum Ftz protein.           25   0.98 
AY055847-1|AAL23667.2|  312|Tribolium castaneum cephalothorax pr...    23   2.3  
AY055846-1|AAL26542.2|  312|Tribolium castaneum cephalothorax pr...    23   2.3  
AY043292-1|AAK96031.1|  323|Tribolium castaneum homeodomain tran...    23   2.3  
AF426396-1|AAL27023.2|  312|Tribolium castaneum cephalothorax pr...    23   2.3  
AF426395-1|AAL27022.2|  297|Tribolium castaneum cephalothorax pr...    23   2.3  
AF416773-1|AAL09697.1|  268|Tribolium castaneum cephalothorax pr...    23   2.3  
AF321227-2|AAK16422.1|  312|Tribolium castaneum Scr protein.           23   2.3  
AF264695-1|AAG13009.1|  100|Tribolium castaneum cephalothorax pr...    23   2.3  
AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless pr...    23   2.3  
AF227628-1|AAF42868.1|  312|Tribolium castaneum sex combs reduce...    23   2.3  
X72339-1|CAA51066.1|  133|Tribolium castaneum abdominal protein.       23   3.0  
AF017415-2|AAB70263.1|  284|Tribolium castaneum abdominal-A prot...    23   3.0  
AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII pr...    23   3.0  
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    23   4.0  
U81040-1|AAB39356.1|  283|Tribolium castaneum TC Deformed protein.     22   5.2  
U81038-1|AAB39355.1|  412|Tribolium castaneum transcription fact...    22   5.2  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    22   5.2  
AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.           22   5.2  
EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetyla...    21   9.1  
AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory recept...    21   9.1  

>AM292375-1|CAL23187.2|  311|Tribolium castaneum gustatory receptor
           candidate 54 protein.
          Length = 311

 Score = 26.2 bits (55), Expect = 0.32
 Identities = 19/86 (22%), Positives = 40/86 (46%)
 Frame = -2

Query: 685 KFLMQRSALKGRFIMRTLTKNTLKDSGAVVILTQLSVYSSTPYALVISICSANLTKSNSR 506
           + ++Q  +  G  +  +  + T +++ A++    LSV+  T  ++++ I   ++  SNSR
Sbjct: 184 RIVLQLLSSLGFLLYASKKQFTFEETFAII---HLSVFVYTLVSVILIIMGCDVVASNSR 240

Query: 505 CTVFLCILYGGLSANRFDRLVYRLRF 428
            T  +C    G       +    LRF
Sbjct: 241 KTAEMCYKLQGFYPEEAPQRKELLRF 266


>U14732-1|AAC46491.1|  322|Tribolium castaneum fushi-tarazu protein.
          Length = 322

 Score = 24.6 bits (51), Expect = 0.98
 Identities = 12/25 (48%), Positives = 17/25 (68%)
 Frame = -1

Query: 281 KSMHFNALLSRRRRYGMSQPRLQLT 207
           K  HFN  L+RRRR  +++  L+LT
Sbjct: 200 KEFHFNKYLTRRRRIEIAE-SLRLT 223


>AY043292-2|AAK96032.1|  290|Tribolium castaneum homeodomain
           transcription factor Fushitarazu protein.
          Length = 290

 Score = 24.6 bits (51), Expect = 0.98
 Identities = 12/25 (48%), Positives = 17/25 (68%)
 Frame = -1

Query: 281 KSMHFNALLSRRRRYGMSQPRLQLT 207
           K  HFN  L+RRRR  +++  L+LT
Sbjct: 200 KEFHFNKYLTRRRRIEIAE-SLRLT 223


>AF321227-1|AAK16421.1|  290|Tribolium castaneum Ftz protein.
          Length = 290

 Score = 24.6 bits (51), Expect = 0.98
 Identities = 12/25 (48%), Positives = 17/25 (68%)
 Frame = -1

Query: 281 KSMHFNALLSRRRRYGMSQPRLQLT 207
           K  HFN  L+RRRR  +++  L+LT
Sbjct: 200 KEFHFNKYLTRRRRIEIAE-SLRLT 223


>AY055847-1|AAL23667.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 23.4 bits (48), Expect = 2.3
 Identities = 9/14 (64%), Positives = 10/14 (71%)
 Frame = -1

Query: 281 KSMHFNALLSRRRR 240
           K  HFN  L+RRRR
Sbjct: 237 KEFHFNRYLTRRRR 250


>AY055846-1|AAL26542.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 23.4 bits (48), Expect = 2.3
 Identities = 9/14 (64%), Positives = 10/14 (71%)
 Frame = -1

Query: 281 KSMHFNALLSRRRR 240
           K  HFN  L+RRRR
Sbjct: 237 KEFHFNRYLTRRRR 250


>AY043292-1|AAK96031.1|  323|Tribolium castaneum homeodomain
           transcription factor Prothoraxlessprotein.
          Length = 323

 Score = 23.4 bits (48), Expect = 2.3
 Identities = 9/14 (64%), Positives = 10/14 (71%)
 Frame = -1

Query: 281 KSMHFNALLSRRRR 240
           K  HFN  L+RRRR
Sbjct: 259 KEFHFNRYLTRRRR 272


>AF426396-1|AAL27023.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 23.4 bits (48), Expect = 2.3
 Identities = 9/14 (64%), Positives = 10/14 (71%)
 Frame = -1

Query: 281 KSMHFNALLSRRRR 240
           K  HFN  L+RRRR
Sbjct: 237 KEFHFNRYLTRRRR 250


>AF426395-1|AAL27022.2|  297|Tribolium castaneum cephalothorax
           protein.
          Length = 297

 Score = 23.4 bits (48), Expect = 2.3
 Identities = 9/14 (64%), Positives = 10/14 (71%)
 Frame = -1

Query: 281 KSMHFNALLSRRRR 240
           K  HFN  L+RRRR
Sbjct: 237 KEFHFNRYLTRRRR 250


>AF416773-1|AAL09697.1|  268|Tribolium castaneum cephalothorax
           protein.
          Length = 268

 Score = 23.4 bits (48), Expect = 2.3
 Identities = 9/14 (64%), Positives = 10/14 (71%)
 Frame = -1

Query: 281 KSMHFNALLSRRRR 240
           K  HFN  L+RRRR
Sbjct: 193 KEFHFNRYLTRRRR 206


>AF321227-2|AAK16422.1|  312|Tribolium castaneum Scr protein.
          Length = 312

 Score = 23.4 bits (48), Expect = 2.3
 Identities = 9/14 (64%), Positives = 10/14 (71%)
 Frame = -1

Query: 281 KSMHFNALLSRRRR 240
           K  HFN  L+RRRR
Sbjct: 237 KEFHFNRYLTRRRR 250


>AF264695-1|AAG13009.1|  100|Tribolium castaneum cephalothorax
           protein.
          Length = 100

 Score = 23.4 bits (48), Expect = 2.3
 Identities = 9/14 (64%), Positives = 10/14 (71%)
 Frame = -1

Query: 281 KSMHFNALLSRRRR 240
           K  HFN  L+RRRR
Sbjct: 25  KEFHFNRYLTRRRR 38


>AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless
           protein.
          Length = 325

 Score = 23.4 bits (48), Expect = 2.3
 Identities = 9/14 (64%), Positives = 10/14 (71%)
 Frame = -1

Query: 281 KSMHFNALLSRRRR 240
           K  HFN  L+RRRR
Sbjct: 261 KEFHFNRYLTRRRR 274


>AF227628-1|AAF42868.1|  312|Tribolium castaneum sex combs reduced
           Scr protein.
          Length = 312

 Score = 23.4 bits (48), Expect = 2.3
 Identities = 9/14 (64%), Positives = 10/14 (71%)
 Frame = -1

Query: 281 KSMHFNALLSRRRR 240
           K  HFN  L+RRRR
Sbjct: 237 KEFHFNRYLTRRRR 250


>X72339-1|CAA51066.1|  133|Tribolium castaneum abdominal protein.
          Length = 133

 Score = 23.0 bits (47), Expect = 3.0
 Identities = 9/14 (64%), Positives = 10/14 (71%)
 Frame = -1

Query: 281 KSMHFNALLSRRRR 240
           K  HFN  L+RRRR
Sbjct: 23  KEFHFNHYLTRRRR 36


>AF017415-2|AAB70263.1|  284|Tribolium castaneum abdominal-A
           protein.
          Length = 284

 Score = 23.0 bits (47), Expect = 3.0
 Identities = 9/14 (64%), Positives = 10/14 (71%)
 Frame = -1

Query: 281 KSMHFNALLSRRRR 240
           K  HFN  L+RRRR
Sbjct: 174 KEFHFNHYLTRRRR 187


>AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII
           protein.
          Length = 343

 Score = 23.0 bits (47), Expect = 3.0
 Identities = 9/14 (64%), Positives = 10/14 (71%)
 Frame = -1

Query: 281 KSMHFNALLSRRRR 240
           K  HFN  L+RRRR
Sbjct: 233 KEFHFNHYLTRRRR 246


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 22.6 bits (46), Expect = 4.0
 Identities = 8/30 (26%), Positives = 17/30 (56%)
 Frame = -2

Query: 175 FETIFDKCQLCFSHNFIAQAIFNILCRNIR 86
           F+T  + C +   + F+  ++ NIL R+ +
Sbjct: 168 FKTFLNSCLMDVYYEFLLISLINILIRSFK 197


>U81040-1|AAB39356.1|  283|Tribolium castaneum TC Deformed protein.
          Length = 283

 Score = 22.2 bits (45), Expect = 5.2
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = -1

Query: 281 KSMHFNALLSRRRR 240
           K  H+N  L+RRRR
Sbjct: 250 KEFHYNRYLTRRRR 263


>U81038-1|AAB39355.1|  412|Tribolium castaneum transcription factor
           Deformed protein.
          Length = 412

 Score = 22.2 bits (45), Expect = 5.2
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = -1

Query: 281 KSMHFNALLSRRRR 240
           K  H+N  L+RRRR
Sbjct: 250 KEFHYNRYLTRRRR 263


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
           protein.
          Length = 2700

 Score = 22.2 bits (45), Expect = 5.2
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = +3

Query: 108 LKIACAIKLWLKQSWHLSKIV 170
           L +  A+K W K+ +  SKIV
Sbjct: 394 LSVDYAVKFWTKKGFPKSKIV 414


>AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.
          Length = 412

 Score = 22.2 bits (45), Expect = 5.2
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = -1

Query: 281 KSMHFNALLSRRRR 240
           K  H+N  L+RRRR
Sbjct: 250 KEFHYNRYLTRRRR 263


>EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetylase
           1 protein.
          Length = 534

 Score = 21.4 bits (43), Expect = 9.1
 Identities = 11/33 (33%), Positives = 16/33 (48%)
 Frame = +2

Query: 164 DCFEAVVCENGGLFVLTGGAAVTCHIDDDDSKA 262
           +C E  +  NG      G    TC ID+D ++A
Sbjct: 128 NCIERGLFCNGEKDCSDGSDENTCDIDNDPNRA 160


>AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory receptor
           candidate 20 protein.
          Length = 393

 Score = 21.4 bits (43), Expect = 9.1
 Identities = 7/12 (58%), Positives = 10/12 (83%)
 Frame = -2

Query: 565 TPYALVISICSA 530
           TPY L+I +C+A
Sbjct: 285 TPYYLLIEVCNA 296


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 185,851
Number of Sequences: 336
Number of extensions: 3999
Number of successful extensions: 35
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 34
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 35
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 23036718
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)