Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV120364.Seq
(804 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC338.05c |mms2|spm2|ubiquitin conjugating enzyme Mms2|Schizos... 96 6e-21
SPBC2D10.20 |ubc1||ubiquitin conjugating enzyme Ubc1|Schizosacch... 48 1e-06
SPCC1259.15c |ubc11|ubcdp, ubcp4|ubiquitin conjugating enzyme E2... 46 8e-06
SPBC119.02 |ubc4||ubiquitin conjugating enzyme Ubc4|Schizosaccha... 46 8e-06
SPAC18B11.07c |rhp6|ubc2|Rad6 homolog, ubiquitin conjugating enz... 44 3e-05
SPBC1198.09 |ubc16||ubiquitin conjugating enzyme Ubc16|Schizosac... 43 4e-05
SPAC30D11.13 |hus5|ubc9|SUMO conjugating enzyme Hus5|Schizosacch... 39 7e-04
SPBC1105.09 |ubc15||ubiquitin conjugating enzyme Ubc15|Schizosac... 37 0.003
SPAC10F6.05c |ubc6||ubiquitin conjugating enzyme Ubc6|Schizosacc... 36 0.007
SPAC1250.03 |ubc14||ubiquitin conjugating enzyme Ubc14|Schizosac... 36 0.007
SPBP16F5.04 |ubc3|ubcp3|ubiquitin conjugating enzyme Ubc3|Schizo... 36 0.009
SPBC211.07c |ubc8||ubiquitin conjugating enzyme Ubc8|Schizosacch... 34 0.021
SPAC11E3.04c |ubc13|spu13|ubiquitin conjugating enzyme Ubc13|Sch... 32 0.11
SPBC215.01 ||SPBC3B9.20|GTPase activating protein|Schizosaccharo... 29 0.77
SPAC1006.09 |win1|SPAC1250.06c, SPAPJ730.01|MAP kinase kinase ki... 28 1.8
SPBC17D1.01 ||SPBC17D11.09|sequence orphan|Schizosaccharomyces p... 27 2.4
SPCC777.10c |ubc12||ubiquitin conjugating enzyme Ubc12|Schizosac... 26 5.5
SPAP8A3.10 |||mitochondrial intermembrane space protein sorting ... 26 5.5
SPAC5H10.11 |gmh1||alpha-1,2-galactosyltransferase Gmh1|Schizosa... 26 5.5
SPBC25H2.13c |cdc20|pol2|DNA polymerase epsilon catalytic subuni... 25 9.5
SPAP11E10.02c |mam3|SPAPB1A10.01c|cell agglutination protein Mam... 25 9.5
SPCC1739.11c |cdc11||SIN component scaffold protein Cdc11|Schizo... 25 9.5
SPBP8B7.29 |||para-aminobenzoate synthase |Schizosaccharomyces p... 25 9.5
>SPCC338.05c |mms2|spm2|ubiquitin conjugating enzyme
Mms2|Schizosaccharomyces pombe|chr 3|||Manual
Length = 139
Score = 95.9 bits (228), Expect = 6e-21
Identities = 41/95 (43%), Positives = 62/95 (65%)
Frame = +3
Query: 225 KGSGRWNHFLGLESDDDMTLTHWTGMIIGPPRTPYENRMYSLKIECGTRYPDEPPTARFI 404
KG G + GL + DD+TL+ W I+GP + +ENR+YSLKI C YPD PP F+
Sbjct: 19 KGLGESSCSYGLTNADDITLSDWNATILGPAHSVHENRIYSLKIHCDANYPDAPPIVTFV 78
Query: 405 SRIHMNCVNSQTGLVDNRQVPILARWQRDYTIKTV 509
SRI++ V+ +TG V+ ++ L W+R+Y+++TV
Sbjct: 79 SRINLPGVDGETGKVNPHKIDCLRHWKREYSMETV 113
Score = 41.5 bits (93), Expect = 1e-04
Identities = 17/27 (62%), Positives = 24/27 (88%)
Frame = +1
Query: 181 VPRNFRLLEELEQGQKGVGDGTISWVL 261
VPRNF+LLEELE+G+KG+G+ + S+ L
Sbjct: 4 VPRNFKLLEELEKGEKGLGESSCSYGL 30
Score = 31.1 bits (67), Expect = 0.19
Identities = 13/25 (52%), Positives = 17/25 (68%)
Frame = +2
Query: 509 LQEVRRLMTLKDNMKLSQPPEGSTF 583
L ++++ M N KL QPPEGSTF
Sbjct: 114 LLDLKKEMASSSNRKLPQPPEGSTF 138
>SPBC2D10.20 |ubc1||ubiquitin conjugating enzyme
Ubc1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 217
Score = 48.4 bits (110), Expect = 1e-06
Identities = 28/76 (36%), Positives = 41/76 (53%), Gaps = 1/76 (1%)
Frame = +3
Query: 282 LTHWTGMIIGPPRTPYENRMYSLKIECGTRYPDEPPTARFISRIHMNCVNSQTGLVDNRQ 461
++H GM GP TPYE + + IE YP PP F ++I+ V+SQTG +
Sbjct: 33 ISHLKGMFRGPEGTPYEGGYFVVDIEIPIDYPFRPPKMNFDTKIYHPNVSSQTGAI---C 89
Query: 462 VPILA-RWQRDYTIKT 506
+ IL +W YT+K+
Sbjct: 90 LDILKDQWSPVYTMKS 105
>SPCC1259.15c |ubc11|ubcdp, ubcp4|ubiquitin conjugating enzyme E2-C
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 176
Score = 45.6 bits (103), Expect = 8e-06
Identities = 26/82 (31%), Positives = 36/82 (43%), Gaps = 1/82 (1%)
Frame = +3
Query: 267 DDDMTLTHWTGMIIGPPRTPYENRMYSLKIECGTRYPDEPPTARFISRI-HMNCVNSQTG 443
D D L HW G I GP T YE + + + YP PPT F S + H N S
Sbjct: 53 DSDSNLLHWAGTITGPSDTYYEGLKFKISMSFPANYPYSPPTIIFTSPMWHPNVDMSGNI 112
Query: 444 LVDNRQVPILARWQRDYTIKTV 509
+D + +W Y ++T+
Sbjct: 113 CLD----ILKDKWSAVYNVQTI 130
>SPBC119.02 |ubc4||ubiquitin conjugating enzyme
Ubc4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 147
Score = 45.6 bits (103), Expect = 8e-06
Identities = 20/51 (39%), Positives = 28/51 (54%)
Frame = +3
Query: 282 LTHWTGMIIGPPRTPYENRMYSLKIECGTRYPDEPPTARFISRIHMNCVNS 434
L HW I+GP +PY ++ L I T YP +PP F +RI+ +NS
Sbjct: 30 LFHWQATIMGPADSPYAGGVFFLSIHFPTDYPFKPPKVNFTTRIYHPNINS 80
>SPAC18B11.07c |rhp6|ubc2|Rad6 homolog, ubiquitin conjugating enzyme
E2 Rhp6|Schizosaccharomyces pombe|chr 1|||Manual
Length = 151
Score = 43.6 bits (98), Expect = 3e-05
Identities = 22/74 (29%), Positives = 37/74 (50%), Gaps = 1/74 (1%)
Frame = +3
Query: 291 WTGMIIGPPRTPYENRMYSLKIECGTRYPDEPPTARFISRI-HMNCVNSQTGLVDNRQVP 467
W +IIGP TP+E+ + L + +YP++PP +F+S + H N + +D Q
Sbjct: 36 WNAVIIGPADTPFEDGTFKLVLSFDEQYPNKPPLVKFVSTMFHPNVYANGELCLDILQ-- 93
Query: 468 ILARWQRDYTIKTV 509
RW Y + +
Sbjct: 94 --NRWSPTYDVAAI 105
>SPBC1198.09 |ubc16||ubiquitin conjugating enzyme
Ubc16|Schizosaccharomyces pombe|chr 2|||Manual
Length = 160
Score = 43.2 bits (97), Expect = 4e-05
Identities = 23/65 (35%), Positives = 33/65 (50%), Gaps = 1/65 (1%)
Frame = +3
Query: 231 SGRWNHFLGLESDDDMTLTHWTGMIIGPPRTPYENRMYSLKIECGTRYPDEPPTARFISR 410
+G + L L+ D+ + HW +I GP TPYE + L I YP PP+ F ++
Sbjct: 17 AGDISGLLLLKPVTDVDMFHWKAVIEGPTETPYEGGQWVLDIHVHEGYPISPPSVYFQTK 76
Query: 411 I-HMN 422
I H N
Sbjct: 77 IVHPN 81
>SPAC30D11.13 |hus5|ubc9|SUMO conjugating enzyme
Hus5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 157
Score = 39.1 bits (87), Expect = 7e-04
Identities = 21/60 (35%), Positives = 28/60 (46%), Gaps = 1/60 (1%)
Frame = +3
Query: 264 SDDDMTLTHWTGMIIGPPRTPYENRMYSLKIECGTRYPDEPPTARFISRI-HMNCVNSQT 440
SD + L +W I G P+T +E +Y L + YP PP RF + H N S T
Sbjct: 32 SDGGLDLMNWKVGIPGKPKTSWEGGLYKLTMAFPEEYPTRPPKCRFTPPLFHPNVYPSGT 91
>SPBC1105.09 |ubc15||ubiquitin conjugating enzyme
Ubc15|Schizosaccharomyces pombe|chr 2|||Manual
Length = 167
Score = 37.1 bits (82), Expect = 0.003
Identities = 19/52 (36%), Positives = 25/52 (48%), Gaps = 1/52 (1%)
Frame = +3
Query: 270 DDMTLTHWTGMIIGPPRTPYENRMYSLKIECGTRYPDEPPTARFISRI-HMN 422
DD ++ W MIIGP T YE + + YP PP +F + I H N
Sbjct: 31 DDKSIFEWEVMIIGPEDTLYEGGFFHATLSFPQDYPLMPPKMKFTTEIWHPN 82
>SPAC10F6.05c |ubc6||ubiquitin conjugating enzyme
Ubc6|Schizosaccharomyces pombe|chr 1|||Manual
Length = 227
Score = 35.9 bits (79), Expect = 0.007
Identities = 16/42 (38%), Positives = 21/42 (50%)
Frame = +3
Query: 282 LTHWTGMIIGPPRTPYENRMYSLKIECGTRYPDEPPTARFIS 407
+ W +I GPP TPYE Y + YP +PP R I+
Sbjct: 34 ILEWHYIITGPPDTPYEGGQYHGTLIFPPDYPFKPPAIRMIT 75
>SPAC1250.03 |ubc14||ubiquitin conjugating enzyme
Ubc14|Schizosaccharomyces pombe|chr 1|||Manual
Length = 155
Score = 35.9 bits (79), Expect = 0.007
Identities = 15/48 (31%), Positives = 23/48 (47%)
Frame = +3
Query: 273 DMTLTHWTGMIIGPPRTPYENRMYSLKIECGTRYPDEPPTARFISRIH 416
D L HW +GP + Y + ++ YP +PPT F +RI+
Sbjct: 33 DDNLFHWACTALGPSDSVYAGGKFHFSLKFPLDYPFQPPTIEFTTRIY 80
>SPBP16F5.04 |ubc3|ubcp3|ubiquitin conjugating enzyme
Ubc3|Schizosaccharomyces pombe|chr 2|||Manual
Length = 166
Score = 35.5 bits (78), Expect = 0.009
Identities = 17/46 (36%), Positives = 26/46 (56%)
Frame = +3
Query: 264 SDDDMTLTHWTGMIIGPPRTPYENRMYSLKIECGTRYPDEPPTARF 401
S++D T W +I GP TP+E +Y ++ + YP PPT +F
Sbjct: 30 SNEDDFFT-WDCLIQGPDGTPFEGGLYPATLKFPSDYPLGPPTLKF 74
>SPBC211.07c |ubc8||ubiquitin conjugating enzyme
Ubc8|Schizosaccharomyces pombe|chr 2|||Manual
Length = 184
Score = 34.3 bits (75), Expect = 0.021
Identities = 14/47 (29%), Positives = 26/47 (55%)
Frame = +3
Query: 309 GPPRTPYENRMYSLKIECGTRYPDEPPTARFISRIHMNCVNSQTGLV 449
GP TPY ++ + +E + YP + P+ F++RI ++ +G V
Sbjct: 38 GPSETPYSGGIWKVHVELPSEYPWKSPSIGFVNRIFHPNIDELSGSV 84
>SPAC11E3.04c |ubc13|spu13|ubiquitin conjugating enzyme
Ubc13|Schizosaccharomyces pombe|chr 1|||Manual
Length = 148
Score = 31.9 bits (69), Expect = 0.11
Identities = 12/36 (33%), Positives = 21/36 (58%)
Frame = +3
Query: 309 GPPRTPYENRMYSLKIECGTRYPDEPPTARFISRIH 416
GP ++ YE + L++ YP PP RF+++I+
Sbjct: 40 GPQQSAYEGGKFHLELFLPDEYPMMPPNVRFLTKIY 75
>SPBC215.01 ||SPBC3B9.20|GTPase activating
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 834
Score = 29.1 bits (62), Expect = 0.77
Identities = 14/32 (43%), Positives = 20/32 (62%)
Frame = -3
Query: 121 KLRLIQSSFIA*ALPKQIRFI*SKYGNLQQSN 26
K RL++S F +LP Q+RF+ Y NL+ N
Sbjct: 27 KFRLLESQFALYSLPCQLRFV--HYNNLEDPN 56
>SPAC1006.09 |win1|SPAC1250.06c, SPAPJ730.01|MAP kinase kinase
kinase Win1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1436
Score = 27.9 bits (59), Expect = 1.8
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = -2
Query: 479 SSKNWDLSIIHKSSLTIDTVHMNPRNKAGCWW 384
S+ NW S+++ SL D + NP+NK W
Sbjct: 291 STVNWVQSVLNLPSLLSDDLMANPKNKERFEW 322
>SPBC17D1.01 ||SPBC17D11.09|sequence orphan|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 584
Score = 27.5 bits (58), Expect = 2.4
Identities = 16/38 (42%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
Frame = -2
Query: 299 SSPMSKSHIIIAFKTQEMVPSPTPFWPCSSS-SKRRKF 189
SSPMS+SH+ I+ + S P P S + K RKF
Sbjct: 439 SSPMSESHVQISSEMPRTGMSALPMRPRSQNVDKHRKF 476
>SPCC777.10c |ubc12||ubiquitin conjugating enzyme
Ubc12|Schizosaccharomyces pombe|chr 3|||Manual
Length = 177
Score = 26.2 bits (55), Expect = 5.5
Identities = 9/37 (24%), Positives = 19/37 (51%)
Frame = +3
Query: 306 IGPPRTPYENRMYSLKIECGTRYPDEPPTARFISRIH 416
I P Y+ + +I+ YP +PP + +++I+
Sbjct: 58 IRPDEGYYKGGKFKFRIQIDDNYPHDPPKVKCLNKIY 94
>SPAP8A3.10 |||mitochondrial intermembrane space protein sorting
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 171
Score = 26.2 bits (55), Expect = 5.5
Identities = 14/28 (50%), Positives = 20/28 (71%)
Frame = +1
Query: 442 DLWIIDKSQFLLDGSVTIPSKQSSRSET 525
DL ++KS ++L+ SV PSKQ +SET
Sbjct: 68 DLLNVNKS-YILERSVIDPSKQELKSET 94
>SPAC5H10.11 |gmh1||alpha-1,2-galactosyltransferase
Gmh1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 329
Score = 26.2 bits (55), Expect = 5.5
Identities = 10/34 (29%), Positives = 19/34 (55%)
Frame = -2
Query: 521 SLLEDCFDGIVTLPSSKNWDLSIIHKSSLTIDTV 420
+LL+DCF + +N++ ++ SSL + V
Sbjct: 103 NLLDDCFKNRIEYAKLQNYNFEFVNVSSLVVPPV 136
>SPBC25H2.13c |cdc20|pol2|DNA polymerase epsilon catalytic subunit a
Pol2 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 2199
Score = 25.4 bits (53), Expect = 9.5
Identities = 11/36 (30%), Positives = 16/36 (44%)
Frame = -2
Query: 317 WWANNHSSPMSKSHIIIAFKTQEMVPSPTPFWPCSS 210
W + + + H+I + E P PTPF P S
Sbjct: 671 WRGEYYPAKKGEYHMIYSALQSERFPGPTPFSPFRS 706
>SPAP11E10.02c |mam3|SPAPB1A10.01c|cell agglutination protein
Mam3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1082
Score = 25.4 bits (53), Expect = 9.5
Identities = 20/65 (30%), Positives = 27/65 (41%), Gaps = 1/65 (1%)
Frame = -2
Query: 293 PMSKSHIIIAFKTQEMVPSPTPFWPCSSSSKRRKFRGTTTPDDGFAMITVSPA*RTVK-T 117
P+S S ++F T T P SSSS +T D F +T + + T
Sbjct: 247 PVSTSEATVSFSTDIPATPSTLSSPASSSSSYLVETSSTLTDSVFTTVTATSDSSVITYT 306
Query: 116 *INSV 102
INSV
Sbjct: 307 LINSV 311
>SPCC1739.11c |cdc11||SIN component scaffold protein
Cdc11|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1045
Score = 25.4 bits (53), Expect = 9.5
Identities = 18/47 (38%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
Frame = +2
Query: 503 NSLQEVRRLMTLKDNMKLSQPPEGSTF*FLQSSLNRPNL-LSHKTII 640
N ++RRL L + +Q PE S F +Q SL+ NL LS+ T +
Sbjct: 813 NRPPDIRRLKRLVNFSFRTQDPEASNF-VIQPSLDIRNLYLSNNTFV 858
>SPBP8B7.29 |||para-aminobenzoate synthase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 718
Score = 25.4 bits (53), Expect = 9.5
Identities = 10/23 (43%), Positives = 16/23 (69%)
Frame = +1
Query: 187 RNFRLLEELEQGQKGVGDGTISW 255
R+ R+LE LEQ +G+ GT+ +
Sbjct: 628 RSVRMLEPLEQHGRGIYSGTLGY 650
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,335,116
Number of Sequences: 5004
Number of extensions: 70040
Number of successful extensions: 168
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 163
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 168
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 390427050
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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