Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV120364.Seq
(804 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_39170| Best HMM Match : No HMM Matches (HMM E-Value=.) 61 9e-10
SB_35256| Best HMM Match : No HMM Matches (HMM E-Value=.) 58 6e-09
SB_44322| Best HMM Match : UQ_con (HMM E-Value=1.6e-37) 46 5e-05
SB_41378| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 1e-04
SB_9528| Best HMM Match : 7tm_1 (HMM E-Value=2.6e-39) 38 0.007
SB_26407| Best HMM Match : UQ_con (HMM E-Value=0) 37 0.017
SB_26761| Best HMM Match : UQ_con (HMM E-Value=1.7e-06) 36 0.029
SB_33408| Best HMM Match : UQ_con (HMM E-Value=3.7e-07) 35 0.067
SB_15708| Best HMM Match : UQ_con (HMM E-Value=0) 34 0.12
SB_5638| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.12
SB_24529| Best HMM Match : Lectin_C (HMM E-Value=3.4e-27) 34 0.16
SB_7202| Best HMM Match : UQ_con (HMM E-Value=5.9e-05) 34 0.16
SB_33407| Best HMM Match : UQ_con (HMM E-Value=0) 34 0.16
SB_30168| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.4
SB_28812| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.4
SB_28696| Best HMM Match : UQ_con (HMM E-Value=5.3e-30) 29 4.4
SB_7361| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.4
SB_30411| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.8
SB_17356| Best HMM Match : DUF590 (HMM E-Value=0) 29 5.8
SB_21376| Best HMM Match : No HMM Matches (HMM E-Value=.) 23 7.0
SB_46386| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.7
>SB_39170| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 79
Score = 61.3 bits (142), Expect = 9e-10
Identities = 26/50 (52%), Positives = 38/50 (76%)
Frame = +3
Query: 321 TPYENRMYSLKIECGTRYPDEPPTARFISRIHMNCVNSQTGLVDNRQVPI 470
T +ENR+Y+LKI CG YP +PPT +F+S+I+MN VNS+ G D+R+ +
Sbjct: 1 TVFENRIYNLKIVCGPNYPQKPPTVKFVSKINMNGVNSK-GETDDREAEL 49
>SB_35256| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 41
Score = 58.4 bits (135), Expect = 6e-09
Identities = 23/39 (58%), Positives = 32/39 (82%)
Frame = +3
Query: 321 TPYENRMYSLKIECGTRYPDEPPTARFISRIHMNCVNSQ 437
T +ENR+Y+LKI CG YP +PPT +F+S+I+MN VNS+
Sbjct: 1 TVFENRIYNLKIVCGPNYPQKPPTVKFVSKINMNGVNSK 39
>SB_44322| Best HMM Match : UQ_con (HMM E-Value=1.6e-37)
Length = 190
Score = 45.6 bits (103), Expect = 5e-05
Identities = 24/70 (34%), Positives = 36/70 (51%), Gaps = 1/70 (1%)
Frame = +3
Query: 303 IIGPPRTPYENRMYSLKIECGTRYPDEPPTARFISRI-HMNCVNSQTGLVDNRQVPILAR 479
+IG TPY ++ L I+ RYP EPP RF++ I H N +S +D ++P
Sbjct: 2 LIGAEGTPYHKGIFKLDIQIPERYPFEPPKVRFVTPIYHPNIDSSGRICLDTLKMPPKGM 61
Query: 480 WQRDYTIKTV 509
W+ I +V
Sbjct: 62 WKPALNISSV 71
>SB_41378| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 473
Score = 44.4 bits (100), Expect = 1e-04
Identities = 22/52 (42%), Positives = 26/52 (50%), Gaps = 1/52 (1%)
Frame = +3
Query: 270 DDMTLTHWTGMIIGPPRTPYENRMYSLKIECGTRYPDEPPTARFISRI-HMN 422
DD L W M++GPP T YE + + YP PPT FIS I H N
Sbjct: 358 DDEDLYKWEIMVVGPPGTYYEEGYFKASMVFPKEYPQRPPTLTFISDIWHPN 409
>SB_9528| Best HMM Match : 7tm_1 (HMM E-Value=2.6e-39)
Length = 841
Score = 38.3 bits (85), Expect = 0.007
Identities = 18/39 (46%), Positives = 20/39 (51%)
Frame = +3
Query: 273 DMTLTHWTGMIIGPPRTPYENRMYSLKIECGTRYPDEPP 389
D T T G I GPP TP+E Y+L I YP PP
Sbjct: 683 DETFTKLKGEIRGPPETPFEGGTYNLDIVIPETYPFNPP 721
>SB_26407| Best HMM Match : UQ_con (HMM E-Value=0)
Length = 1282
Score = 37.1 bits (82), Expect = 0.017
Identities = 19/60 (31%), Positives = 27/60 (45%), Gaps = 1/60 (1%)
Frame = +3
Query: 258 LESDDDMTLTHWTGMIIGPPRTPYENRMYSLKIECGTRYPDEPPTARFISRI-HMNCVNS 434
+E D+ W I GPP T Y + + YP PPT RF++++ H N S
Sbjct: 1146 VEVPDESNTFEWDVAIFGPPGTLYAGGYFKAHMSFPHDYPYSPPTFRFLTKMWHPNIYES 1205
>SB_26761| Best HMM Match : UQ_con (HMM E-Value=1.7e-06)
Length = 739
Score = 36.3 bits (80), Expect = 0.029
Identities = 14/36 (38%), Positives = 22/36 (61%)
Frame = +3
Query: 300 MIIGPPRTPYENRMYSLKIECGTRYPDEPPTARFIS 407
MI GP TPY++ +++ I YPD PP+ ++S
Sbjct: 639 MIEGPAGTPYDHGLFAFDILLPANYPDAPPSFHYLS 674
>SB_33408| Best HMM Match : UQ_con (HMM E-Value=3.7e-07)
Length = 181
Score = 35.1 bits (77), Expect = 0.067
Identities = 15/36 (41%), Positives = 20/36 (55%)
Frame = +3
Query: 282 LTHWTGMIIGPPRTPYENRMYSLKIECGTRYPDEPP 389
L W I+GPP + YE ++ L I T YP +PP
Sbjct: 51 LYEWYSTILGPPGSVYEGGVFFLDIHFPTDYPFKPP 86
>SB_15708| Best HMM Match : UQ_con (HMM E-Value=0)
Length = 145
Score = 34.3 bits (75), Expect = 0.12
Identities = 14/49 (28%), Positives = 26/49 (53%)
Frame = +3
Query: 270 DDMTLTHWTGMIIGPPRTPYENRMYSLKIECGTRYPDEPPTARFISRIH 416
D+ + +W G+I+ P PY + ++I YP +PP F ++I+
Sbjct: 19 DESNILYWQGLIV-PEMPPYNKGAFRIEICFPAEYPFKPPKITFKTKIY 66
>SB_5638| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 151
Score = 34.3 bits (75), Expect = 0.12
Identities = 18/53 (33%), Positives = 26/53 (49%), Gaps = 1/53 (1%)
Frame = +3
Query: 252 LGLESD-DDMTLTHWTGMIIGPPRTPYENRMYSLKIECGTRYPDEPPTARFIS 407
+G+ D DD+ H +I GP TPYE + I C YP PP + ++
Sbjct: 1 MGIVPDKDDIPKIH--ALITGPFDTPYEGGFFYFLIRCPPDYPIRPPRVKLMT 51
>SB_24529| Best HMM Match : Lectin_C (HMM E-Value=3.4e-27)
Length = 644
Score = 33.9 bits (74), Expect = 0.16
Identities = 30/110 (27%), Positives = 45/110 (40%), Gaps = 10/110 (9%)
Frame = -2
Query: 434 TIDTVHMNPRNKAGCWWLIRVSCSTF--------NFKGVHSILVGCPWWA-NNHSSPMSK 282
T+ H + A W+ VS S F NF GVH + W A +N P+ K
Sbjct: 137 TVHHTHRRVKRDAAMAWVEDVSASGFDLCLRELQNFDGVHQDIT-ASWMAFDNLHRPLFK 195
Query: 281 SHIIIAFKTQEMVPSPTPFWPCSS-SSKRRKFRGTTTPDDGFAMITVSPA 135
H +I F ++ P + C +S K D G++ +TV+ A
Sbjct: 196 EHGLIHFSNRQPPPKRVNYAFCKQVNSTGAKICVKQVYDSGYSPLTVNYA 245
>SB_7202| Best HMM Match : UQ_con (HMM E-Value=5.9e-05)
Length = 200
Score = 33.9 bits (74), Expect = 0.16
Identities = 17/45 (37%), Positives = 24/45 (53%)
Frame = +3
Query: 255 GLESDDDMTLTHWTGMIIGPPRTPYENRMYSLKIECGTRYPDEPP 389
G + DD L W I+GPP + YE ++ L I + YP +PP
Sbjct: 158 GPKGDD---LYEWYSTILGPPGSVYEGGVFFLDIHFPSDYPFKPP 199
>SB_33407| Best HMM Match : UQ_con (HMM E-Value=0)
Length = 226
Score = 33.9 bits (74), Expect = 0.16
Identities = 17/45 (37%), Positives = 24/45 (53%)
Frame = +3
Query: 255 GLESDDDMTLTHWTGMIIGPPRTPYENRMYSLKIECGTRYPDEPP 389
G + DD L W I+GPP + YE ++ L I + YP +PP
Sbjct: 118 GPKGDD---LYEWYSTILGPPGSVYEGGVFFLDIHFPSDYPFKPP 159
>SB_30168| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 6863
Score = 29.1 bits (62), Expect = 4.4
Identities = 15/47 (31%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Frame = -2
Query: 527 DVSLLEDC-FDGIVTLPSSKNWDLSIIHKSSLTIDTVHMNPRNKAGC 390
D +LL + + + L SS+N +++HK T+D + RN GC
Sbjct: 3857 DYTLLNEFKSESVTALESSENAVATLMHKIDGTLDNLSDEDRNSIGC 3903
>SB_28812| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 385
Score = 29.1 bits (62), Expect = 4.4
Identities = 19/76 (25%), Positives = 32/76 (42%)
Frame = +3
Query: 282 LTHWTGMIIGPPRTPYENRMYSLKIECGTRYPDEPPTARFISRIHMNCVNSQTGLVDNRQ 461
L W + GPP T + Y +I YP +PP+ ++ + + L +
Sbjct: 38 LFEWHFTVRGPPDTEFAGGRYHGRIILPPEYPMKPPSIMLLTPNGRFEIGKKICLSMSAH 97
Query: 462 VPILARWQRDYTIKTV 509
P WQ ++I+TV
Sbjct: 98 HP--ETWQPSWSIRTV 111
>SB_28696| Best HMM Match : UQ_con (HMM E-Value=5.3e-30)
Length = 204
Score = 29.1 bits (62), Expect = 4.4
Identities = 21/61 (34%), Positives = 31/61 (50%), Gaps = 1/61 (1%)
Frame = +3
Query: 330 ENRMYSLKIECGTRYPDEPPTARFISRI-HMNCVNSQTGLVDNRQVPILARWQRDYTIKT 506
ENR+ K+E T P EPP RF++ I H N +S +D ++P W+ I +
Sbjct: 29 ENRID--KLEAST--PFEPPKVRFVTPIYHPNIDSSGRICLDTLKMPPKGMWKPALNISS 84
Query: 507 V 509
V
Sbjct: 85 V 85
>SB_7361| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 831
Score = 29.1 bits (62), Expect = 4.4
Identities = 22/74 (29%), Positives = 31/74 (41%), Gaps = 9/74 (12%)
Frame = -2
Query: 434 TIDTVHMNPRNKAGCWWLIRVSCSTF--------NFKGVHSILVGCPWWA-NNHSSPMSK 282
T+ H + A W+ VS S F NF GVH + W A +N P+ K
Sbjct: 151 TVHHTHRRVKRDAAMAWVEDVSASGFDLCLRELQNFDGVHEDIT-ASWMAFDNLHRPLFK 209
Query: 281 SHIIIAFKTQEMVP 240
H +I F ++ P
Sbjct: 210 EHGLIHFSNRQPPP 223
>SB_30411| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 710
Score = 28.7 bits (61), Expect = 5.8
Identities = 14/41 (34%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
Frame = +3
Query: 309 GPPRTPYENRMYSLKIECGTRYPDEPPT-ARFISRIHMNCV 428
GP TPYE ++ ++++ +YP + P+ A F I + CV
Sbjct: 56 GPVGTPYEGGVWKVRVDLPEKYPFKSPSIANFTIEISV-CV 95
>SB_17356| Best HMM Match : DUF590 (HMM E-Value=0)
Length = 982
Score = 28.7 bits (61), Expect = 5.8
Identities = 18/46 (39%), Positives = 26/46 (56%), Gaps = 2/46 (4%)
Frame = -2
Query: 290 MSKSHIIIAFKTQEMVPSPTP-FWPCS-SSSKRRKFRGTTTPDDGF 159
+ K H+ FK E VP+P P F+ C+ ++K KF G+ PD F
Sbjct: 309 LEKFHMPNIFK--EEVPNPPPDFFTCTFQANKLNKFIGSDDPDSYF 352
>SB_21376| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 290
Score = 23.4 bits (48), Expect(2) = 7.0
Identities = 10/35 (28%), Positives = 17/35 (48%)
Frame = -2
Query: 482 PSSKNWDLSIIHKSSLTIDTVHMNPRNKAGCWWLI 378
PSS+ L + H ++T N+ GC W++
Sbjct: 28 PSSQRDYLFVSHIGNVTPSEEGQRLENEVGCAWMV 62
Score = 23.4 bits (48), Expect(2) = 7.0
Identities = 13/40 (32%), Positives = 18/40 (45%), Gaps = 3/40 (7%)
Frame = -2
Query: 329 VGCPWWANNHSSPMSKSHIIIAFKTQEMVP---SPTPFWP 219
VGC W NN S + +++ K P SP P +P
Sbjct: 56 VGCAWMVNNWSVEHPDAPCLVSAKCGGHPPTNFSPNPPYP 95
>SB_46386| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 849
Score = 28.3 bits (60), Expect = 7.7
Identities = 14/37 (37%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
Frame = -2
Query: 485 LPSSKNWDLSIIHKSSLTIDTVHM-NPRNKAGCWWLI 378
LPS+K W +I H SL V + +P N WW +
Sbjct: 789 LPSTKGWKNAIRHTLSLRQRFVRLPDPGNPYRSWWTV 825
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,388,789
Number of Sequences: 59808
Number of extensions: 498385
Number of successful extensions: 1111
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 1041
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1111
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2227723674
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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