Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV120364.Seq
(804 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z92834-2|CAB07383.1| 139|Caenorhabditis elegans Hypothetical pr... 123 1e-28
AF099919-11|AAC68796.1| 199|Caenorhabditis elegans Ubiquitin co... 52 4e-07
Z68337-1|CAA92745.1| 147|Caenorhabditis elegans Hypothetical pr... 50 2e-06
U08139-1|AAA83388.1| 192|Caenorhabditis elegans ubc-1 protein. 50 2e-06
S56051-1|AAB25489.2| 147|Caenorhabditis elegans ubiquitin-conju... 50 2e-06
AF045638-8|AAC02561.2| 192|Caenorhabditis elegans Ubiquitin con... 50 2e-06
Z22179-13|CAA80166.1| 164|Caenorhabditis elegans Hypothetical p... 44 2e-04
AC025726-12|AAK73914.3| 243|Caenorhabditis elegans Ubiquitin co... 42 7e-04
U41026-5|AAA82352.2| 546|Caenorhabditis elegans Ubiquitin conju... 41 0.001
U39674-5|AAA80415.2| 229|Caenorhabditis elegans Ubiquitin conju... 37 0.019
AC024747-1|AAO21404.1| 203|Caenorhabditis elegans Ubiquitin con... 35 0.078
AC024876-5|AAF60891.2| 221|Caenorhabditis elegans Ubiquitin con... 34 0.10
U40411-1|AAC47063.2| 679|Caenorhabditis elegans Ubiquitin conju... 33 0.24
AL110500-10|CAB60431.1| 170|Caenorhabditis elegans Hypothetical... 32 0.55
AC024817-43|AAK93865.2| 151|Caenorhabditis elegans Ubiquitin co... 32 0.55
U39674-4|AAA80414.2| 182|Caenorhabditis elegans Ubiquitin conju... 31 0.73
U00035-7|AAA50648.2| 153|Caenorhabditis elegans Ubiquitin conju... 31 0.73
AF040645-12|AAB94978.2| 78|Caenorhabditis elegans Hypothetical... 31 0.73
Z27079-11|CAC42341.1| 115|Caenorhabditis elegans Hypothetical p... 29 2.9
AF009907-1|AAB63300.1| 101|Caenorhabditis elegans paraquat-indu... 29 2.9
Z81507-4|CAL49434.1| 598|Caenorhabditis elegans Hypothetical pr... 29 5.1
Z30974-4|CAA83226.2| 3767|Caenorhabditis elegans Hypothetical pr... 29 5.1
Z30423-14|CAC42345.1| 3767|Caenorhabditis elegans Hypothetical p... 29 5.1
DQ523832-1|ABF71877.1| 598|Caenorhabditis elegans P21-activated... 29 5.1
AL032639-12|CAL49443.1| 598|Caenorhabditis elegans Hypothetical... 29 5.1
AF139060-1|AAD29428.1| 3767|Caenorhabditis elegans transmembrane... 29 5.1
U28738-2|AAA68309.4| 982|Caenorhabditis elegans Hypothetical pr... 28 6.8
>Z92834-2|CAB07383.1| 139|Caenorhabditis elegans Hypothetical
protein F39B2.2 protein.
Length = 139
Score = 123 bits (297), Expect = 1e-28
Identities = 53/97 (54%), Positives = 65/97 (67%)
Frame = +3
Query: 225 KGSGRWNHFLGLESDDDMTLTHWTGMIIGPPRTPYENRMYSLKIECGTRYPDEPPTARFI 404
KG G N GLE D DMTLT WT IIGPPRTPYE+R+Y+L+I+CG YP EPPT RF
Sbjct: 19 KGKGDGNISWGLEDDSDMTLTRWTASIIGPPRTPYESRIYNLQIQCGGNYPREPPTVRFT 78
Query: 405 SRIHMNCVNSQTGLVDNRQVPILARWQRDYTIKTVFK 515
+++HM VN G++D R + L W Y IKTV +
Sbjct: 79 TKVHMVGVNQSNGVIDKRNLTTLRNWSNSYMIKTVLE 115
Score = 53.2 bits (122), Expect = 2e-07
Identities = 24/30 (80%), Positives = 26/30 (86%)
Frame = +1
Query: 175 VVVPRNFRLLEELEQGQKGVGDGTISWVLK 264
V VPRNFRLLEELE+GQKG GDG ISW L+
Sbjct: 2 VDVPRNFRLLEELEEGQKGKGDGNISWGLE 31
Score = 29.9 bits (64), Expect = 2.2
Identities = 12/26 (46%), Positives = 20/26 (76%), Gaps = 1/26 (3%)
Frame = +2
Query: 509 LQEVRR-LMTLKDNMKLSQPPEGSTF 583
L+++R+ +M K+N+KL QP EG+ F
Sbjct: 114 LEDIRKNMMMAKENLKLQQPAEGAMF 139
>AF099919-11|AAC68796.1| 199|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein20 protein.
Length = 199
Score = 52.4 bits (120), Expect = 4e-07
Identities = 30/77 (38%), Positives = 43/77 (55%), Gaps = 1/77 (1%)
Frame = +3
Query: 282 LTHWTGMIIGPPRTPYENRMYSLKIECGTRYPDEPPTARFISRIHMNCVNSQTGLVDNRQ 461
LT G I GPP TPY M+ L I+ +YP PP +F ++I V+SQTG++
Sbjct: 36 LTEIKGHIRGPPDTPYAGGMFDLDIKIPDQYPFSPPNVKFSTKIWHPNVSSQTGVI---C 92
Query: 462 VPILA-RWQRDYTIKTV 509
+ IL +W T++TV
Sbjct: 93 LDILKDQWAASLTLRTV 109
>Z68337-1|CAA92745.1| 147|Caenorhabditis elegans Hypothetical
protein M7.1 protein.
Length = 147
Score = 50.0 bits (114), Expect = 2e-06
Identities = 21/51 (41%), Positives = 30/51 (58%)
Frame = +3
Query: 282 LTHWTGMIIGPPRTPYENRMYSLKIECGTRYPDEPPTARFISRIHMNCVNS 434
L HW I+GPP +PY+ ++ L I T YP +PP F +RI+ +NS
Sbjct: 30 LFHWQATIMGPPESPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINS 80
>U08139-1|AAA83388.1| 192|Caenorhabditis elegans ubc-1 protein.
Length = 192
Score = 50.0 bits (114), Expect = 2e-06
Identities = 27/81 (33%), Positives = 42/81 (51%), Gaps = 1/81 (1%)
Frame = +3
Query: 270 DDMTLTHWTGMIIGPPRTPYENRMYSLKIECGTRYPDEPPTARFISRI-HMNCVNSQTGL 446
+D LT W +I GP TP+E+ + L +E YP++PPT +FIS++ H N +
Sbjct: 30 EDNILT-WEAIIFGPQETPFEDGTFKLSLEFTEEYPNKPPTVKFISKMFHPNVYADGSIC 88
Query: 447 VDNRQVPILARWQRDYTIKTV 509
+D Q RW Y + +
Sbjct: 89 LDILQ----NRWSPTYDVAAI 105
>S56051-1|AAB25489.2| 147|Caenorhabditis elegans
ubiquitin-conjugating enzyme protein.
Length = 147
Score = 50.0 bits (114), Expect = 2e-06
Identities = 21/51 (41%), Positives = 30/51 (58%)
Frame = +3
Query: 282 LTHWTGMIIGPPRTPYENRMYSLKIECGTRYPDEPPTARFISRIHMNCVNS 434
L HW I+GPP +PY+ ++ L I T YP +PP F +RI+ +NS
Sbjct: 30 LFHWQATIMGPPESPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINS 80
>AF045638-8|AAC02561.2| 192|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein1 protein.
Length = 192
Score = 50.0 bits (114), Expect = 2e-06
Identities = 27/81 (33%), Positives = 42/81 (51%), Gaps = 1/81 (1%)
Frame = +3
Query: 270 DDMTLTHWTGMIIGPPRTPYENRMYSLKIECGTRYPDEPPTARFISRI-HMNCVNSQTGL 446
+D LT W +I GP TP+E+ + L +E YP++PPT +FIS++ H N +
Sbjct: 30 EDNILT-WEAIIFGPQETPFEDGTFKLSLEFTEEYPNKPPTVKFISKMFHPNVYADGSIC 88
Query: 447 VDNRQVPILARWQRDYTIKTV 509
+D Q RW Y + +
Sbjct: 89 LDILQ----NRWSPTYDVAAI 105
>Z22179-13|CAA80166.1| 164|Caenorhabditis elegans Hypothetical
protein F58A4.10 protein.
Length = 164
Score = 43.6 bits (98), Expect = 2e-04
Identities = 20/52 (38%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
Frame = +3
Query: 270 DDMTLTHWTGMIIGPPRTPYENRMYSLKIECGTRYPDEPPTARFISRI-HMN 422
DD + W ++IGPP T YE + ++ YP +PP +FIS I H N
Sbjct: 29 DDNDIYKWEVLVIGPPDTLYEGGFFKAILDFPRDYPQKPPKMKFISEIWHPN 80
>AC025726-12|AAK73914.3| 243|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein3 protein.
Length = 243
Score = 41.5 bits (93), Expect = 7e-04
Identities = 24/83 (28%), Positives = 41/83 (49%), Gaps = 10/83 (12%)
Frame = +3
Query: 291 WTGMIIGPPRTPYENRMYSLKIECGTRYPDEPPTARFISRI-HMN-------CVNSQTGL 446
WT I GPP+T Y+ + I + YP PP+ +F +++ H N C++
Sbjct: 42 WTVGIYGPPKTLYQGGYFKASIRFPSNYPYSPPSMKFTTKVWHPNVYENGDLCISILHSP 101
Query: 447 VDNRQVPILA--RWQRDYTIKTV 509
+D+ Q LA RW +++T+
Sbjct: 102 IDDPQSGELACERWNPTQSVRTI 124
>U41026-5|AAA82352.2| 546|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein23 protein.
Length = 546
Score = 40.7 bits (91), Expect = 0.001
Identities = 19/51 (37%), Positives = 29/51 (56%)
Frame = +3
Query: 297 GMIIGPPRTPYENRMYSLKIECGTRYPDEPPTARFISRIHMNCVNSQTGLV 449
G+I G TPYE ++ L I+ G YP + PT +FI++I V+ G +
Sbjct: 383 GIIKGVEETPYEGGIFELDIKIGESYPFKAPTVKFITKIWHPSVSPFDGTI 433
>U39674-5|AAA80415.2| 229|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein21 protein.
Length = 229
Score = 36.7 bits (81), Expect = 0.019
Identities = 27/87 (31%), Positives = 41/87 (47%), Gaps = 16/87 (18%)
Frame = +3
Query: 297 GMIIGPPRTPYENRMYSLKIECGTRYPDEPP---------------TARFISRIHMNCVN 431
G I GP TPY + +K++ YP EPP A+F++RI ++
Sbjct: 55 GFIKGPEGTPYAGGTFEIKVDIPEHYPFEPPKVTEIIFHIRAFEYIQAKFVTRIWHPNIS 114
Query: 432 SQTGLVDNRQVPILA-RWQRDYTIKTV 509
SQTG + + IL +W T++TV
Sbjct: 115 SQTGTI---CLDILKDKWTASLTLRTV 138
>AC024747-1|AAO21404.1| 203|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein26 protein.
Length = 203
Score = 34.7 bits (76), Expect = 0.078
Identities = 14/39 (35%), Positives = 22/39 (56%)
Frame = +3
Query: 273 DMTLTHWTGMIIGPPRTPYENRMYSLKIECGTRYPDEPP 389
+ + W +IIG P+TPYE +Y K+ +P +PP
Sbjct: 34 ETNILEWRYIIIGAPKTPYEGGIYMGKLLFPKDFPFKPP 72
>AC024876-5|AAF60891.2| 221|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein8 protein.
Length = 221
Score = 34.3 bits (75), Expect = 0.10
Identities = 13/47 (27%), Positives = 28/47 (59%)
Frame = +3
Query: 309 GPPRTPYENRMYSLKIECGTRYPDEPPTARFISRIHMNCVNSQTGLV 449
GP T YEN ++ ++++ +YP + P+ F+++I ++ +G V
Sbjct: 41 GPKDTAYENGVWRIRVDMPDKYPFKSPSIGFLNKIFHPNIDEASGTV 87
>U40411-1|AAC47063.2| 679|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein17 protein.
Length = 679
Score = 33.1 bits (72), Expect = 0.24
Identities = 14/36 (38%), Positives = 19/36 (52%)
Frame = +3
Query: 300 MIIGPPRTPYENRMYSLKIECGTRYPDEPPTARFIS 407
+I GP TPY N ++ I T YP PP F++
Sbjct: 448 LISGPDDTPYANGLFEFDIFFPTGYPFSPPKCAFLT 483
>AL110500-10|CAB60431.1| 170|Caenorhabditis elegans Hypothetical
protein Y87G2A.9 protein.
Length = 170
Score = 31.9 bits (69), Expect = 0.55
Identities = 17/52 (32%), Positives = 23/52 (44%), Gaps = 1/52 (1%)
Frame = +3
Query: 270 DDMTLTHWTGMIIGPPRTPYENRMYSLKIECGTRYPDEPPTARFISRI-HMN 422
D+ W +I GP T + N ++ +I YP PP RF I H N
Sbjct: 30 DEDNFFEWECLITGPEETCFANGVFPARITFPQDYPLSPPKMRFTCGIFHPN 81
>AC024817-43|AAK93865.2| 151|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein13 protein.
Length = 151
Score = 31.9 bits (69), Expect = 0.55
Identities = 13/49 (26%), Positives = 26/49 (53%)
Frame = +3
Query: 270 DDMTLTHWTGMIIGPPRTPYENRMYSLKIECGTRYPDEPPTARFISRIH 416
D+ ++ MI GP +P+ ++ L++ YP P RF+++I+
Sbjct: 29 DESNARYFHVMIAGPDDSPFAGGVFKLELFLPEEYPMAAPKVRFMTKIY 77
>U39674-4|AAA80414.2| 182|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein22 protein.
Length = 182
Score = 31.5 bits (68), Expect = 0.73
Identities = 16/49 (32%), Positives = 23/49 (46%)
Frame = +3
Query: 303 IIGPPRTPYENRMYSLKIECGTRYPDEPPTARFISRIHMNCVNSQTGLV 449
I GP TPYE ++ + + YP+ P +F + I V TG V
Sbjct: 35 IAGPADTPYETGVFEVDLTFPDNYPNALPQIKFQTLIWNCAVEPSTGQV 83
>U00035-7|AAA50648.2| 153|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein18 protein.
Length = 153
Score = 31.5 bits (68), Expect = 0.73
Identities = 14/49 (28%), Positives = 25/49 (51%)
Frame = +3
Query: 270 DDMTLTHWTGMIIGPPRTPYENRMYSLKIECGTRYPDEPPTARFISRIH 416
++ L WT ++I P + PY + + I YP +PP F ++I+
Sbjct: 28 EETNLLKWTVLLI-PDKEPYNKGAFKVGITFPVDYPFKPPKVAFETKIY 75
>AF040645-12|AAB94978.2| 78|Caenorhabditis elegans Hypothetical
protein F52C6.12 protein.
Length = 78
Score = 31.5 bits (68), Expect = 0.73
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = +3
Query: 282 LTHWTGMIIGPPRTPYENRMYSLKI 356
L HW I+GPP +PY+ ++ L I
Sbjct: 30 LYHWQATIMGPPESPYQGGIFFLTI 54
>Z27079-11|CAC42341.1| 115|Caenorhabditis elegans Hypothetical
protein T05G5.11 protein.
Length = 115
Score = 29.5 bits (63), Expect = 2.9
Identities = 12/35 (34%), Positives = 21/35 (60%)
Frame = -3
Query: 580 SASLWWLRKLHVIFKSHETSHFLKTVLMV*SRCHL 476
S LW++ K H ++ SH T++F + ++ CHL
Sbjct: 79 SGLLWYINKAHELYASHLTANFGNNIYIL-VLCHL 112
>AF009907-1|AAB63300.1| 101|Caenorhabditis elegans
paraquat-inducible protein protein.
Length = 101
Score = 29.5 bits (63), Expect = 2.9
Identities = 12/35 (34%), Positives = 21/35 (60%)
Frame = -3
Query: 580 SASLWWLRKLHVIFKSHETSHFLKTVLMV*SRCHL 476
S LW++ K H ++ SH T++F + ++ CHL
Sbjct: 65 SGLLWYINKAHELYASHLTANFGNNIYIL-VLCHL 98
>Z81507-4|CAL49434.1| 598|Caenorhabditis elegans Hypothetical
protein Y38F1A.10a protein.
Length = 598
Score = 28.7 bits (61), Expect = 5.1
Identities = 14/44 (31%), Positives = 21/44 (47%)
Frame = -2
Query: 308 NNHSSPMSKSHIIIAFKTQEMVPSPTPFWPCSSSSKRRKFRGTT 177
NNH S S + ++ + VPSP P S+ + + F G T
Sbjct: 164 NNHLSTASSTDTSLSLSERNNVPSPAPVPYSESAPQLKTFTGET 207
>Z30974-4|CAA83226.2| 3767|Caenorhabditis elegans Hypothetical
protein K08E5.3a protein.
Length = 3767
Score = 28.7 bits (61), Expect = 5.1
Identities = 13/56 (23%), Positives = 26/56 (46%)
Frame = +3
Query: 261 ESDDDMTLTHWTGMIIGPPRTPYENRMYSLKIECGTRYPDEPPTARFISRIHMNCV 428
+ D++ L G PR +N+++ KI+C + + + P F+ R C+
Sbjct: 56 DGSDEVCLPWQFDCQFGSPRCISKNKLHDKKIDCYSGFDEGCPAHYFVCRDRSACI 111
>Z30423-14|CAC42345.1| 3767|Caenorhabditis elegans Hypothetical
protein K08E5.3a protein.
Length = 3767
Score = 28.7 bits (61), Expect = 5.1
Identities = 13/56 (23%), Positives = 26/56 (46%)
Frame = +3
Query: 261 ESDDDMTLTHWTGMIIGPPRTPYENRMYSLKIECGTRYPDEPPTARFISRIHMNCV 428
+ D++ L G PR +N+++ KI+C + + + P F+ R C+
Sbjct: 56 DGSDEVCLPWQFDCQFGSPRCISKNKLHDKKIDCYSGFDEGCPAHYFVCRDRSACI 111
>DQ523832-1|ABF71877.1| 598|Caenorhabditis elegans P21-activated
kinase MAX-2 protein.
Length = 598
Score = 28.7 bits (61), Expect = 5.1
Identities = 14/44 (31%), Positives = 21/44 (47%)
Frame = -2
Query: 308 NNHSSPMSKSHIIIAFKTQEMVPSPTPFWPCSSSSKRRKFRGTT 177
NNH S S + ++ + VPSP P S+ + + F G T
Sbjct: 164 NNHLSTASSTDTSLSLSERNNVPSPAPVPYSESAPQLKTFTGET 207
>AL032639-12|CAL49443.1| 598|Caenorhabditis elegans Hypothetical
protein Y38F1A.10a protein.
Length = 598
Score = 28.7 bits (61), Expect = 5.1
Identities = 14/44 (31%), Positives = 21/44 (47%)
Frame = -2
Query: 308 NNHSSPMSKSHIIIAFKTQEMVPSPTPFWPCSSSSKRRKFRGTT 177
NNH S S + ++ + VPSP P S+ + + F G T
Sbjct: 164 NNHLSTASSTDTSLSLSERNNVPSPAPVPYSESAPQLKTFTGET 207
>AF139060-1|AAD29428.1| 3767|Caenorhabditis elegans transmembrane
cell adhesion receptorMUA-3 precursor protein.
Length = 3767
Score = 28.7 bits (61), Expect = 5.1
Identities = 13/56 (23%), Positives = 26/56 (46%)
Frame = +3
Query: 261 ESDDDMTLTHWTGMIIGPPRTPYENRMYSLKIECGTRYPDEPPTARFISRIHMNCV 428
+ D++ L G PR +N+++ KI+C + + + P F+ R C+
Sbjct: 56 DGSDEVCLPWQFDCQFGSPRCISKNKLHDKKIDCYSGFDEGCPAHYFVCRDRSACI 111
>U28738-2|AAA68309.4| 982|Caenorhabditis elegans Hypothetical
protein T28D9.7 protein.
Length = 982
Score = 28.3 bits (60), Expect = 6.8
Identities = 20/71 (28%), Positives = 28/71 (39%)
Frame = -2
Query: 515 LEDCFDGIVTLPSSKNWDLSIIHKSSLTIDTVHMNPRNKAGCWWLIRVSCSTFNFKGVHS 336
+E FD ++ K+WD+ + H R GC W SC +FK V +
Sbjct: 178 VESVFDTVLR----KSWDMDAV---KFLRSAAHWKSRMILGCTWPNGTSCKLSDFKAVWT 230
Query: 335 ILVGCPWWANN 303
C WA N
Sbjct: 231 TTGLC--WAIN 239
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,285,473
Number of Sequences: 27780
Number of extensions: 387009
Number of successful extensions: 837
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 811
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 837
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1966828226
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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