Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV120364.Seq
(804 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g23260.1 68414.m02910 ubiquitin-conjugating enzyme family pro... 106 2e-23
At2g36060.1 68415.m04427 ubiquitin-conjugating enzyme family pro... 105 3e-23
At3g52560.1 68416.m05784 ubiquitin-conjugating enzyme family pro... 104 6e-23
At2g36060.2 68415.m04428 ubiquitin-conjugating enzyme family pro... 101 6e-22
At1g70660.1 68414.m08146 ubiquitin-conjugating enzyme family pro... 100 1e-21
At3g52560.2 68416.m05785 ubiquitin-conjugating enzyme family pro... 100 1e-21
At5g25760.1 68418.m03057 ubiquitin-conjugating enzyme, putative ... 51 1e-06
At3g24515.1 68416.m03077 ubiquitin-conjugating enzyme, putative ... 49 3e-06
At5g62540.1 68418.m07849 ubiquitin-conjugating enzyme 3 (UBC3) E... 48 1e-05
At2g02760.1 68415.m00219 ubiquitin-conjugating enzyme 2 (UBC2) E... 48 1e-05
At1g14400.2 68414.m01708 ubiquitin-conjugating enzyme 1 (UBC1) E... 48 1e-05
At1g14400.1 68414.m01707 ubiquitin-conjugating enzyme 1 (UBC1) E... 48 1e-05
At1g36340.1 68414.m04516 ubiquitin-conjugating enzyme family pro... 46 4e-05
At5g50870.1 68418.m06304 ubiquitin-conjugating enzyme, putative ... 45 5e-05
At3g46460.1 68416.m05037 ubiquitin-conjugating enzyme 13 (UBC13)... 43 2e-04
At3g13550.1 68416.m01703 ubiquitin-conjugating enzyme (COP10) id... 43 3e-04
At3g08690.1 68416.m01010 ubiquitin-conjugating enzyme 11 (UBC11)... 42 4e-04
At5g59300.1 68418.m07430 ubiquitin-conjugating enzyme 7 (UBC7) E... 42 5e-04
At3g08700.1 68416.m01011 ubiquitin-conjugating enzyme, putative ... 41 0.001
At1g78870.2 68414.m09194 ubiquitin-conjugating enzyme, putative ... 39 0.003
At1g78870.1 68414.m09193 ubiquitin-conjugating enzyme, putative ... 39 0.003
At1g16890.2 68414.m02044 ubiquitin-conjugating enzyme, putative ... 39 0.003
At3g55380.1 68416.m06151 ubiquitin-conjugating enzyme 14 (UBC14)... 38 0.006
At5g41700.4 68418.m05071 ubiquitin-conjugating enzyme 8 (UBC8) E... 38 0.008
At5g41700.3 68418.m05068 ubiquitin-conjugating enzyme 8 (UBC8) E... 38 0.008
At5g41700.2 68418.m05070 ubiquitin-conjugating enzyme 8 (UBC8) E... 38 0.008
At5g41700.1 68418.m05069 ubiquitin-conjugating enzyme 8 (UBC8) E... 38 0.008
At1g16890.1 68414.m02043 ubiquitin-conjugating enzyme, putative ... 38 0.008
At5g53300.2 68418.m06625 ubiquitin-conjugating enzyme 10 (UBC10)... 38 0.010
At5g53300.1 68418.m06624 ubiquitin-conjugating enzyme 10 (UBC10)... 38 0.010
At2g32790.1 68415.m04014 ubiquitin-conjugating enzyme, putative ... 38 0.010
At1g64230.1 68414.m07276 ubiquitin-conjugating enzyme, putative ... 38 0.010
At4g27960.2 68417.m04012 ubiquitin-conjugating enzyme E2-17 kDa ... 37 0.014
At4g27960.1 68417.m04011 ubiquitin-conjugating enzyme E2-17 kDa ... 37 0.014
At2g16740.1 68415.m01920 ubiquitin-conjugating enzyme, putative ... 37 0.014
At1g45050.1 68414.m05165 ubiquitin-conjugating enzyme 15 (UBC15)... 37 0.014
At5g05080.1 68418.m00539 ubiquitin-conjugating enzyme, putative ... 37 0.018
At1g50490.1 68414.m05662 ubiquitin-conjugating enzyme 20 (UBC20)... 36 0.031
At5g42990.1 68418.m05243 ubiquitin-conjugating enzyme 18 (UBC18)... 34 0.096
At5g56150.2 68418.m07005 ubiquitin-conjugating enzyme, putative ... 34 0.13
At5g56150.1 68418.m07004 ubiquitin-conjugating enzyme, putative ... 34 0.13
At3g20060.1 68416.m02537 ubiquitin-conjugating enzyme 19 (UBC19)... 33 0.17
At2g46030.1 68415.m05726 ubiquitin-conjugating enzyme 6 (UBC6) E... 33 0.17
At1g75440.1 68414.m08763 ubiquitin-conjugating enzyme 16 (UBC16)... 33 0.17
At1g63800.1 68414.m07220 ubiquitin-conjugating enzyme 5 (UBC5) E... 33 0.29
At2g33770.1 68415.m04141 ubiquitin-conjugating enzyme family pro... 32 0.51
At4g36410.1 68417.m05173 ubiquitin-conjugating enzyme 17 (UBC17)... 31 0.68
At5g41340.1 68418.m05024 ubiquitin-conjugating enzyme 4 (UBC4) E... 31 1.2
At3g17000.1 68416.m02171 ubiquitin-conjugating enzyme, putative ... 30 1.6
At1g53020.1 68414.m06002 ubiquitin-conjugating enzyme family pro... 30 2.1
At1g55915.1 68414.m06413 expressed protein similar to Hypothetic... 29 2.7
At2g47210.1 68415.m05896 myb family transcription factor contain... 29 3.6
At1g66700.3 68414.m07582 S-adenosyl-L-methionine:carboxyl methyl... 29 3.6
At3g18060.1 68416.m02297 transducin family protein / WD-40 repea... 29 4.8
At5g16590.1 68418.m01942 leucine-rich repeat transmembrane prote... 28 8.3
At3g57870.1 68416.m06451 ubiquitin-conjugating enzyme, putative ... 28 8.3
At3g15355.1 68416.m01945 ubiquitin-conjugating enzyme-related si... 28 8.3
>At1g23260.1 68414.m02910 ubiquitin-conjugating enzyme family
protein similar to TRAF6-regulated IKK activator 1 beta
Uev1A [Homo sapiens] GI:10880969; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 158
Score = 106 bits (254), Expect = 2e-23
Identities = 43/98 (43%), Positives = 64/98 (65%)
Frame = +3
Query: 225 KGSGRWNHFLGLESDDDMTLTHWTGMIIGPPRTPYENRMYSLKIECGTRYPDEPPTARFI 404
KG G G++ DD+ + WTG I+GPP T YE +++ LK+ CG YP+ PPT RF
Sbjct: 25 KGIGDGTVSYGMDDADDIYMQSWTGTILGPPNTAYEGKIFQLKLFCGKEYPESPPTVRFQ 84
Query: 405 SRIHMNCVNSQTGLVDNRQVPILARWQRDYTIKTVFKK 518
+RI+M CVN +TG+V+ P+L W+R+YT++ + K
Sbjct: 85 TRINMACVNPETGVVEPSLFPMLTNWRREYTMEDILVK 122
Score = 55.6 bits (128), Expect = 4e-08
Identities = 23/34 (67%), Positives = 31/34 (91%)
Frame = +1
Query: 154 MANPSSGVVVPRNFRLLEELEQGQKGVGDGTISW 255
M++ + VVVPRNFRLLEELE+G+KG+GDGT+S+
Sbjct: 1 MSSEEAKVVVPRNFRLLEELERGEKGIGDGTVSY 34
>At2g36060.1 68415.m04427 ubiquitin-conjugating enzyme family
protein similar to DNA-binding protein CROC-1B [Homo
sapiens] GI:1066082; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 145
Score = 105 bits (253), Expect = 3e-23
Identities = 45/95 (47%), Positives = 63/95 (66%)
Frame = +3
Query: 225 KGSGRWNHFLGLESDDDMTLTHWTGMIIGPPRTPYENRMYSLKIECGTRYPDEPPTARFI 404
KG G G++ DD+ + WTG IIGP T +E R+Y LK+ C YP++PPT RF
Sbjct: 26 KGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTVHEGRIYQLKLFCDKDYPEKPPTVRFH 85
Query: 405 SRIHMNCVNSQTGLVDNRQVPILARWQRDYTIKTV 509
SRI+M CVN TG+VD+++ +LA WQR YT++ +
Sbjct: 86 SRINMTCVNHDTGVVDSKKFGVLANWQRQYTMEDI 120
Score = 55.2 bits (127), Expect = 5e-08
Identities = 23/29 (79%), Positives = 28/29 (96%)
Frame = +1
Query: 169 SGVVVPRNFRLLEELEQGQKGVGDGTISW 255
S VVVPRNFRLLEELE+G+KG+GDGT+S+
Sbjct: 7 SSVVVPRNFRLLEELERGEKGIGDGTVSY 35
>At3g52560.1 68416.m05784 ubiquitin-conjugating enzyme family
protein similar to DNA-binding protein CROC-1B [Homo
sapiens] GI:1066082; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 146
Score = 104 bits (250), Expect = 6e-23
Identities = 44/95 (46%), Positives = 64/95 (67%)
Frame = +3
Query: 225 KGSGRWNHFLGLESDDDMTLTHWTGMIIGPPRTPYENRMYSLKIECGTRYPDEPPTARFI 404
KG G G++ DD+ + WTG IIGP T +E R+Y LK+ C YP++PPT RF
Sbjct: 27 KGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTVHEGRIYQLKLFCDKDYPEKPPTVRFH 86
Query: 405 SRIHMNCVNSQTGLVDNRQVPILARWQRDYTIKTV 509
SR++M CVN +TG+VD ++ +LA WQR+YT++ +
Sbjct: 87 SRVNMACVNHETGVVDPKKFGLLANWQREYTMEDI 121
Score = 55.6 bits (128), Expect = 4e-08
Identities = 23/34 (67%), Positives = 30/34 (88%)
Frame = +1
Query: 154 MANPSSGVVVPRNFRLLEELEQGQKGVGDGTISW 255
+ + S VVVPRNFRLLEELE+G+KG+GDGT+S+
Sbjct: 3 LGSGGSSVVVPRNFRLLEELERGEKGIGDGTVSY 36
Score = 27.9 bits (59), Expect = 8.3
Identities = 11/28 (39%), Positives = 19/28 (67%)
Frame = +2
Query: 500 QNSLQEVRRLMTLKDNMKLSQPPEGSTF 583
++ L ++++ M+ N KL QPPEG+ F
Sbjct: 119 EDILVQLKKEMSTSHNRKLVQPPEGTCF 146
>At2g36060.2 68415.m04428 ubiquitin-conjugating enzyme family
protein similar to DNA-binding protein CROC-1B [Homo
sapiens] GI:1066082; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 146
Score = 101 bits (242), Expect = 6e-22
Identities = 45/96 (46%), Positives = 63/96 (65%), Gaps = 1/96 (1%)
Frame = +3
Query: 225 KGSGRWNHFLGLESDDDMTLTHWTGMIIGPPR-TPYENRMYSLKIECGTRYPDEPPTARF 401
KG G G++ DD+ + WTG IIGP T +E R+Y LK+ C YP++PPT RF
Sbjct: 26 KGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNVTVHEGRIYQLKLFCDKDYPEKPPTVRF 85
Query: 402 ISRIHMNCVNSQTGLVDNRQVPILARWQRDYTIKTV 509
SRI+M CVN TG+VD+++ +LA WQR YT++ +
Sbjct: 86 HSRINMTCVNHDTGVVDSKKFGVLANWQRQYTMEDI 121
Score = 55.2 bits (127), Expect = 5e-08
Identities = 23/29 (79%), Positives = 28/29 (96%)
Frame = +1
Query: 169 SGVVVPRNFRLLEELEQGQKGVGDGTISW 255
S VVVPRNFRLLEELE+G+KG+GDGT+S+
Sbjct: 7 SSVVVPRNFRLLEELERGEKGIGDGTVSY 35
>At1g70660.1 68414.m08146 ubiquitin-conjugating enzyme family
protein similar to TRAF6-regulated IKK activator 1 beta
Uev1A [Homo sapiens] GI:10880969; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 159
Score = 100 bits (240), Expect = 1e-21
Identities = 41/93 (44%), Positives = 61/93 (65%)
Frame = +3
Query: 225 KGSGRWNHFLGLESDDDMTLTHWTGMIIGPPRTPYENRMYSLKIECGTRYPDEPPTARFI 404
KG G G++ DD+ + WTG I+GP T YE +++ LK+ CG YP+ PPT RF
Sbjct: 25 KGIGDGTVSYGMDDADDILMQSWTGTILGPHNTAYEGKIFQLKLFCGKDYPESPPTVRFQ 84
Query: 405 SRIHMNCVNSQTGLVDNRQVPILARWQRDYTIK 503
SRI+M CVN + G+VD P+L+ W+R++T++
Sbjct: 85 SRINMACVNPENGVVDPSHFPMLSNWRREFTME 117
Score = 54.8 bits (126), Expect = 6e-08
Identities = 23/34 (67%), Positives = 29/34 (85%)
Frame = +1
Query: 154 MANPSSGVVVPRNFRLLEELEQGQKGVGDGTISW 255
M + VVVPRNFRLLEELE+G+KG+GDGT+S+
Sbjct: 1 MGSEEEKVVVPRNFRLLEELERGEKGIGDGTVSY 34
>At3g52560.2 68416.m05785 ubiquitin-conjugating enzyme family
protein similar to DNA-binding protein CROC-1B [Homo
sapiens] GI:1066082; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 147
Score = 100 bits (239), Expect = 1e-21
Identities = 44/96 (45%), Positives = 64/96 (66%), Gaps = 1/96 (1%)
Frame = +3
Query: 225 KGSGRWNHFLGLESDDDMTLTHWTGMIIGPPR-TPYENRMYSLKIECGTRYPDEPPTARF 401
KG G G++ DD+ + WTG IIGP T +E R+Y LK+ C YP++PPT RF
Sbjct: 27 KGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNVTVHEGRIYQLKLFCDKDYPEKPPTVRF 86
Query: 402 ISRIHMNCVNSQTGLVDNRQVPILARWQRDYTIKTV 509
SR++M CVN +TG+VD ++ +LA WQR+YT++ +
Sbjct: 87 HSRVNMACVNHETGVVDPKKFGLLANWQREYTMEDI 122
Score = 55.6 bits (128), Expect = 4e-08
Identities = 23/34 (67%), Positives = 30/34 (88%)
Frame = +1
Query: 154 MANPSSGVVVPRNFRLLEELEQGQKGVGDGTISW 255
+ + S VVVPRNFRLLEELE+G+KG+GDGT+S+
Sbjct: 3 LGSGGSSVVVPRNFRLLEELERGEKGIGDGTVSY 36
Score = 27.9 bits (59), Expect = 8.3
Identities = 11/28 (39%), Positives = 19/28 (67%)
Frame = +2
Query: 500 QNSLQEVRRLMTLKDNMKLSQPPEGSTF 583
++ L ++++ M+ N KL QPPEG+ F
Sbjct: 120 EDILVQLKKEMSTSHNRKLVQPPEGTCF 147
>At5g25760.1 68418.m03057 ubiquitin-conjugating enzyme, putative
similar to SP|O60015 Ubiquitin-conjugating enzyme E2-21
kDa (EC 6.3.2.19) (Ubiquitin-protein ligase) (Ubiquitin
carrier protein) {Pichia angusta}; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 157
Score = 50.8 bits (116), Expect = 1e-06
Identities = 22/58 (37%), Positives = 32/58 (55%)
Frame = +3
Query: 270 DDMTLTHWTGMIIGPPRTPYENRMYSLKIECGTRYPDEPPTARFISRIHMNCVNSQTG 443
DD + WT +I GP TPYE ++ L YP +PP RF+++I V+ +TG
Sbjct: 30 DDTNIFKWTALIKGPSETPYEGGVFQLAFSVPEPYPLQPPQVRFLTKIFHPNVHFKTG 87
>At3g24515.1 68416.m03077 ubiquitin-conjugating enzyme, putative
similar to Ubiquitin-conjugating enzyme E2
(Ubiquitin-protein ligase) (Ubiquitin carrier protein)
from {Xenopus laevis} SP|P51669, {Schizosaccharomyces
pombe} SP|P46595, {Caenorhabditis elegans} SP|P35129;
contains Pfam profile PF00179: Ubiquitin-conjugating
enzyme
Length = 409
Score = 49.2 bits (112), Expect = 3e-06
Identities = 30/83 (36%), Positives = 39/83 (46%), Gaps = 1/83 (1%)
Frame = +3
Query: 264 SDDDMTLTHWTGMIIGPPRTPYENRMYSLKIECGTRYPDEPPTARFISRI-HMNCVNSQT 440
S D T + I GP T Y N +++LKI+ RYP +PP F + I H N NS
Sbjct: 38 SGDFSTFSTIDAQIEGPEDTVYANGIFNLKIQIPERYPFQPPIVSFATPIYHPNIDNSGR 97
Query: 441 GLVDNRQVPILARWQRDYTIKTV 509
+D +P WQ I TV
Sbjct: 98 ICLDILNLPPKGAWQPSLNISTV 120
>At5g62540.1 68418.m07849 ubiquitin-conjugating enzyme 3 (UBC3) E2;
identical to gi:431261, SP:P42746
Length = 150
Score = 47.6 bits (108), Expect = 1e-05
Identities = 19/51 (37%), Positives = 29/51 (56%), Gaps = 1/51 (1%)
Frame = +3
Query: 273 DMTLTHWTGMIIGPPRTPYENRMYSLKIECGTRYPDEPPTARFISRI-HMN 422
D + HW +I GP TP++ + L + YP++PP RF+SR+ H N
Sbjct: 30 DNNIMHWNALIFGPEDTPWDGGTFKLTLHFTEDYPNKPPIVRFVSRMFHPN 80
>At2g02760.1 68415.m00219 ubiquitin-conjugating enzyme 2 (UBC2) E2;
identical to gi:2689242, SP:P42745
Length = 152
Score = 47.6 bits (108), Expect = 1e-05
Identities = 21/57 (36%), Positives = 34/57 (59%), Gaps = 1/57 (1%)
Frame = +3
Query: 255 GLESDDDMTLTHWTGMIIGPPRTPYENRMYSLKIECGTRYPDEPPTARFISRI-HMN 422
G D+++ L W +I GP TP++ + L ++ YP++PPT RF+SR+ H N
Sbjct: 26 GAPQDNNIML--WNAVIFGPDDTPWDGGTFKLSLQFSEDYPNKPPTVRFVSRMFHPN 80
>At1g14400.2 68414.m01708 ubiquitin-conjugating enzyme 1 (UBC1) E2;
identical to gi:431259, SP:P25865
Length = 152
Score = 47.6 bits (108), Expect = 1e-05
Identities = 21/57 (36%), Positives = 34/57 (59%), Gaps = 1/57 (1%)
Frame = +3
Query: 255 GLESDDDMTLTHWTGMIIGPPRTPYENRMYSLKIECGTRYPDEPPTARFISRI-HMN 422
G D+++ L W +I GP TP++ + L ++ YP++PPT RF+SR+ H N
Sbjct: 26 GAPQDNNIML--WNAVIFGPDDTPWDGGTFKLSLQFSEDYPNKPPTVRFVSRMFHPN 80
>At1g14400.1 68414.m01707 ubiquitin-conjugating enzyme 1 (UBC1) E2;
identical to gi:431259, SP:P25865
Length = 152
Score = 47.6 bits (108), Expect = 1e-05
Identities = 21/57 (36%), Positives = 34/57 (59%), Gaps = 1/57 (1%)
Frame = +3
Query: 255 GLESDDDMTLTHWTGMIIGPPRTPYENRMYSLKIECGTRYPDEPPTARFISRI-HMN 422
G D+++ L W +I GP TP++ + L ++ YP++PPT RF+SR+ H N
Sbjct: 26 GAPQDNNIML--WNAVIFGPDDTPWDGGTFKLSLQFSEDYPNKPPTVRFVSRMFHPN 80
>At1g36340.1 68414.m04516 ubiquitin-conjugating enzyme family
protein similar to Ubiquitin-conjugating enzyme E2-16
kDa (EC 6.3.2.19) (Ubiquitin-protein ligase) (Ubiquitin
carrier protein) from {Schizosaccharomyces pombe}
SP|P46595, {Caenorhabditis elegans} SP|P35129; contains
Pfam profile PF00179: Ubiquitin-conjugating enzyme
Length = 154
Score = 45.6 bits (103), Expect = 4e-05
Identities = 21/55 (38%), Positives = 31/55 (56%)
Frame = +3
Query: 291 WTGMIIGPPRTPYENRMYSLKIECGTRYPDEPPTARFISRIHMNCVNSQTGLVDN 455
WT +I GP TPYE M++L I+ T YP +PP F + I+ +N + + N
Sbjct: 39 WTAVIRGPDGTPYEGGMFNLSIKFPTDYPFKPPKFTFKTPIYHPNINDEGSICMN 93
>At5g50870.1 68418.m06304 ubiquitin-conjugating enzyme, putative
strong similarity to ubiquitin conjugating enzyme
[Lycopersicon esculentum] GI:886679; contains Pfam
profile PF00179: Ubiquitin-conjugating enzyme
Length = 192
Score = 45.2 bits (102), Expect = 5e-05
Identities = 27/76 (35%), Positives = 40/76 (52%), Gaps = 1/76 (1%)
Frame = +3
Query: 282 LTHWTGMIIGPPRTPYENRMYSLKIECGTRYPDEPPTARFISRIHMNCVNSQTGLVDNRQ 461
LT TG I GP TPYE + + I YP EPP +F +++ ++SQ+G +
Sbjct: 32 LTRLTGTIPGPIGTPYEGGTFQIDITMPDGYPFEPPKMQFSTKVWHPNISSQSGAI---C 88
Query: 462 VPILA-RWQRDYTIKT 506
+ IL +W T+KT
Sbjct: 89 LDILKDQWSPALTLKT 104
>At3g46460.1 68416.m05037 ubiquitin-conjugating enzyme 13 (UBC13)
E2; identical to gi:992706
Length = 166
Score = 43.2 bits (97), Expect = 2e-04
Identities = 21/52 (40%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Frame = +3
Query: 270 DDMTLTHWTGMIIGPPRTPYENRMYSLKIECGTRYPDEPPTARFISRI-HMN 422
D+ + W+ IIGPP T YE + + YP+ PPT RF S I H N
Sbjct: 30 DEKNIFEWSVTIIGPPDTLYEGGFFYAIMSFPQNYPNSPPTVRFTSDIWHPN 81
>At3g13550.1 68416.m01703 ubiquitin-conjugating enzyme (COP10)
identical to ubiquitin-conjugating enzyme COP10
[Arabidopsis thaliana] GI:20065779; contains Pfam
profile PF00179: Ubiquitin-conjugating enzyme
Length = 182
Score = 42.7 bits (96), Expect = 3e-04
Identities = 20/45 (44%), Positives = 26/45 (57%)
Frame = +3
Query: 282 LTHWTGMIIGPPRTPYENRMYSLKIECGTRYPDEPPTARFISRIH 416
L HW IIGP TPYE ++ L I + YP +PP F +RI+
Sbjct: 65 LYHWIATIIGPSGTPYEGGIFFLDIIFPSDYPFKPPKLVFKTRIY 109
>At3g08690.1 68416.m01010 ubiquitin-conjugating enzyme 11 (UBC11)
E2; identical to gi:12643427, SP:P35134
Length = 148
Score = 42.3 bits (95), Expect = 4e-04
Identities = 16/49 (32%), Positives = 27/49 (55%)
Frame = +3
Query: 288 HWTGMIIGPPRTPYENRMYSLKIECGTRYPDEPPTARFISRIHMNCVNS 434
HW I+GPP +PY ++ + I YP +PP F ++++ +NS
Sbjct: 32 HWQATIMGPPESPYAGGVFLVSIHFPPDYPFKPPKVSFKTKVYHPNINS 80
>At5g59300.1 68418.m07430 ubiquitin-conjugating enzyme 7 (UBC7) E2;
identical to gi:992703, SP:P42747
Length = 198
Score = 41.9 bits (94), Expect = 5e-04
Identities = 19/49 (38%), Positives = 26/49 (53%)
Frame = +3
Query: 261 ESDDDMTLTHWTGMIIGPPRTPYENRMYSLKIECGTRYPDEPPTARFIS 407
+S D + W+ IIGPP T YE ++ + YP+ PPT RF S
Sbjct: 59 QSCDCYNIFEWSVTIIGPPDTLYEGGFFNAIMTFPQNYPNSPPTVRFTS 107
>At3g08700.1 68416.m01011 ubiquitin-conjugating enzyme, putative
strong similar to ubiquitin-conjugating enzymes E2-17
from [Arabidopsis thaliana] SP|P35134, SP|P35132,
SP|P35133; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 149
Score = 40.7 bits (91), Expect = 0.001
Identities = 14/50 (28%), Positives = 30/50 (60%)
Frame = +3
Query: 288 HWTGMIIGPPRTPYENRMYSLKIECGTRYPDEPPTARFISRIHMNCVNSQ 437
HW I+GP +PY ++++ I+ + YP +PP F ++++ ++S+
Sbjct: 33 HWQATIMGPHDSPYSGGVFTVSIDFSSDYPFKPPKVNFKTKVYHPNIDSK 82
>At1g78870.2 68414.m09194 ubiquitin-conjugating enzyme, putative
nearly identical to ubiquitin-conjugating enzyme E2
[Catharanthus roseus] GI:5381319; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 153
Score = 39.1 bits (87), Expect = 0.003
Identities = 17/51 (33%), Positives = 32/51 (62%)
Frame = +3
Query: 264 SDDDMTLTHWTGMIIGPPRTPYENRMYSLKIECGTRYPDEPPTARFISRIH 416
S+D+M ++ MI+GP ++PYE ++ L++ YP P RF+++I+
Sbjct: 30 SEDNMR--YFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIY 78
>At1g78870.1 68414.m09193 ubiquitin-conjugating enzyme, putative
nearly identical to ubiquitin-conjugating enzyme E2
[Catharanthus roseus] GI:5381319; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 112
Score = 39.1 bits (87), Expect = 0.003
Identities = 17/51 (33%), Positives = 32/51 (62%)
Frame = +3
Query: 264 SDDDMTLTHWTGMIIGPPRTPYENRMYSLKIECGTRYPDEPPTARFISRIH 416
S+D+M ++ MI+GP ++PYE ++ L++ YP P RF+++I+
Sbjct: 30 SEDNMR--YFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIY 78
>At1g16890.2 68414.m02044 ubiquitin-conjugating enzyme, putative
nearly identical to ubiquitin-conjugating enzyme E2
[Catharanthus roseus] GI:5381319; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 153
Score = 39.1 bits (87), Expect = 0.003
Identities = 15/51 (29%), Positives = 30/51 (58%)
Frame = +3
Query: 264 SDDDMTLTHWTGMIIGPPRTPYENRMYSLKIECGTRYPDEPPTARFISRIH 416
S + + ++ MI+GP ++PYE ++ L++ YP P RF+++I+
Sbjct: 28 SPSEENMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIY 78
>At3g55380.1 68416.m06151 ubiquitin-conjugating enzyme 14 (UBC14)
E2; UbcAT3; identical to gi:2129757, S46656
Length = 167
Score = 38.3 bits (85), Expect = 0.006
Identities = 18/52 (34%), Positives = 26/52 (50%), Gaps = 1/52 (1%)
Frame = +3
Query: 270 DDMTLTHWTGMIIGPPRTPYENRMYSLKIECGTRYPDEPPTARFISRI-HMN 422
D+ + W+ I+GPP T YE ++ + YP PPT F S + H N
Sbjct: 31 DEKNVFQWSVSIMGPPDTLYEGGFFNAIMSFPENYPVSPPTVTFTSEMWHPN 82
>At5g41700.4 68418.m05071 ubiquitin-conjugating enzyme 8 (UBC8) E2;
identical to gi:297882, SP:P35131
Length = 149
Score = 37.9 bits (84), Expect = 0.008
Identities = 15/49 (30%), Positives = 25/49 (51%)
Frame = +3
Query: 288 HWTGMIIGPPRTPYENRMYSLKIECGTRYPDEPPTARFISRIHMNCVNS 434
HW I+GP +PY ++ + I YP +PP F +++ +NS
Sbjct: 33 HWQATIMGPAESPYSGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINS 81
>At5g41700.3 68418.m05068 ubiquitin-conjugating enzyme 8 (UBC8) E2;
identical to gi:297882, SP:P35131
Length = 145
Score = 37.9 bits (84), Expect = 0.008
Identities = 15/49 (30%), Positives = 25/49 (51%)
Frame = +3
Query: 288 HWTGMIIGPPRTPYENRMYSLKIECGTRYPDEPPTARFISRIHMNCVNS 434
HW I+GP +PY ++ + I YP +PP F +++ +NS
Sbjct: 32 HWQATIMGPAESPYSGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINS 80
>At5g41700.2 68418.m05070 ubiquitin-conjugating enzyme 8 (UBC8) E2;
identical to gi:297882, SP:P35131
Length = 148
Score = 37.9 bits (84), Expect = 0.008
Identities = 15/49 (30%), Positives = 25/49 (51%)
Frame = +3
Query: 288 HWTGMIIGPPRTPYENRMYSLKIECGTRYPDEPPTARFISRIHMNCVNS 434
HW I+GP +PY ++ + I YP +PP F +++ +NS
Sbjct: 32 HWQATIMGPAESPYSGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINS 80
>At5g41700.1 68418.m05069 ubiquitin-conjugating enzyme 8 (UBC8) E2;
identical to gi:297882, SP:P35131
Length = 148
Score = 37.9 bits (84), Expect = 0.008
Identities = 15/49 (30%), Positives = 25/49 (51%)
Frame = +3
Query: 288 HWTGMIIGPPRTPYENRMYSLKIECGTRYPDEPPTARFISRIHMNCVNS 434
HW I+GP +PY ++ + I YP +PP F +++ +NS
Sbjct: 32 HWQATIMGPAESPYSGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINS 80
>At1g16890.1 68414.m02043 ubiquitin-conjugating enzyme, putative
nearly identical to ubiquitin-conjugating enzyme E2
[Catharanthus roseus] GI:5381319; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 120
Score = 37.9 bits (84), Expect = 0.008
Identities = 14/45 (31%), Positives = 28/45 (62%)
Frame = +3
Query: 282 LTHWTGMIIGPPRTPYENRMYSLKIECGTRYPDEPPTARFISRIH 416
+ ++ MI+GP ++PYE ++ L++ YP P RF+++I+
Sbjct: 1 MRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIY 45
>At5g53300.2 68418.m06625 ubiquitin-conjugating enzyme 10 (UBC10)
E2; identical to gi:297877, SP:P35133
Length = 148
Score = 37.5 bits (83), Expect = 0.010
Identities = 15/49 (30%), Positives = 25/49 (51%)
Frame = +3
Query: 288 HWTGMIIGPPRTPYENRMYSLKIECGTRYPDEPPTARFISRIHMNCVNS 434
HW I+GP +PY ++ + I YP +PP F +++ +NS
Sbjct: 32 HWQATIMGPSESPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINS 80
>At5g53300.1 68418.m06624 ubiquitin-conjugating enzyme 10 (UBC10)
E2; identical to gi:297877, SP:P35133
Length = 148
Score = 37.5 bits (83), Expect = 0.010
Identities = 15/49 (30%), Positives = 25/49 (51%)
Frame = +3
Query: 288 HWTGMIIGPPRTPYENRMYSLKIECGTRYPDEPPTARFISRIHMNCVNS 434
HW I+GP +PY ++ + I YP +PP F +++ +NS
Sbjct: 32 HWQATIMGPSESPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINS 80
>At2g32790.1 68415.m04014 ubiquitin-conjugating enzyme, putative
similar to ubiquitin conjugating enzyme from [Oryza
sativa] GI:1373001, {Arabidopsis thaliana} SP|P35134,
SP|P35131; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 177
Score = 37.5 bits (83), Expect = 0.010
Identities = 25/75 (33%), Positives = 37/75 (49%), Gaps = 2/75 (2%)
Frame = +3
Query: 291 WTGMIIGPPRTPYENRMYSLKIECGTRYPDEPPTARFISRI-HMNCVNSQTGLVDNRQVP 467
W + GP PYE ++++ + +YP EPP F ++I H N S+ G + V
Sbjct: 62 WEATVNGPVGCPYEKGVFTVSVHIPPKYPYEPPKITFKTKIFHPNI--SEIGEI---FVD 116
Query: 468 IL-ARWQRDYTIKTV 509
IL +RW TI V
Sbjct: 117 ILGSRWSSALTINLV 131
>At1g64230.1 68414.m07276 ubiquitin-conjugating enzyme, putative
identical or nearly so to Ubiquitin-conjugating enzymes
SP|P35132, SP|P35131, SP|P35133 from {Arabidopsis
thaliana}; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 148
Score = 37.5 bits (83), Expect = 0.010
Identities = 16/49 (32%), Positives = 25/49 (51%)
Frame = +3
Query: 288 HWTGMIIGPPRTPYENRMYSLKIECGTRYPDEPPTARFISRIHMNCVNS 434
HW I+GP +PY ++ + I YP +PP F +++ VNS
Sbjct: 32 HWQATIMGPSDSPYSGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNVNS 80
>At4g27960.2 68417.m04012 ubiquitin-conjugating enzyme E2-17 kDa 9
(UBC9) E2; identical to gi:297883, SP:P35132; identical
to cDNA UBC9 for ubiquitin conjugating enzyme homolog
GI:297883
Length = 178
Score = 37.1 bits (82), Expect = 0.014
Identities = 15/49 (30%), Positives = 25/49 (51%)
Frame = +3
Query: 288 HWTGMIIGPPRTPYENRMYSLKIECGTRYPDEPPTARFISRIHMNCVNS 434
HW I+GP +PY ++ + I YP +PP F +++ +NS
Sbjct: 62 HWQATIMGPSDSPYSGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINS 110
>At4g27960.1 68417.m04011 ubiquitin-conjugating enzyme E2-17 kDa 9
(UBC9) E2; identical to gi:297883, SP:P35132; identical
to cDNA UBC9 for ubiquitin conjugating enzyme homolog
GI:297883
Length = 148
Score = 37.1 bits (82), Expect = 0.014
Identities = 15/49 (30%), Positives = 25/49 (51%)
Frame = +3
Query: 288 HWTGMIIGPPRTPYENRMYSLKIECGTRYPDEPPTARFISRIHMNCVNS 434
HW I+GP +PY ++ + I YP +PP F +++ +NS
Sbjct: 32 HWQATIMGPSDSPYSGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINS 80
>At2g16740.1 68415.m01920 ubiquitin-conjugating enzyme, putative
strong similarity to SP|P35133 Ubiquitin-conjugating
enzyme E2-17 kDa 10 (EC 6.3.2.19) (Ubiquitin- protein
ligase 10) (Ubiquitin carrier protein 10) {Arabidopsis
thaliana}; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 148
Score = 37.1 bits (82), Expect = 0.014
Identities = 15/49 (30%), Positives = 25/49 (51%)
Frame = +3
Query: 288 HWTGMIIGPPRTPYENRMYSLKIECGTRYPDEPPTARFISRIHMNCVNS 434
HW I+GP +PY ++ + I YP +PP F +++ +NS
Sbjct: 32 HWQATIMGPNESPYSGGVFLVNIHFPPDYPFKPPKVVFRTKVFHPNINS 80
>At1g45050.1 68414.m05165 ubiquitin-conjugating enzyme 15 (UBC15)
E2; identical to ubiquitin-conjugating enzyme 15
GI:2801442 from [Arabidopsis thaliana]
Length = 161
Score = 37.1 bits (82), Expect = 0.014
Identities = 17/42 (40%), Positives = 21/42 (50%)
Frame = +3
Query: 282 LTHWTGMIIGPPRTPYENRMYSLKIECGTRYPDEPPTARFIS 407
L WT + G P T Y N Y L++E YP E P F+S
Sbjct: 43 LQKWTIDVTGAPGTLYANETYQLQVEFPEHYPMEAPQVVFVS 84
>At5g05080.1 68418.m00539 ubiquitin-conjugating enzyme, putative
similar to SP|Q16763 Ubiquitin-conjugating enzyme E2-24
kDa (EC 6.3.2.19) (Ubiquitin- protein ligase) (Ubiquitin
carrier protein) {Homo sapiens}; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 251
Score = 36.7 bits (81), Expect = 0.018
Identities = 16/45 (35%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Frame = +3
Query: 303 IIGPPRTPYENRMYSLKIECGTRYPDEPPTARFISRI-HMNCVNS 434
I GP TPYEN ++ +K+ +P PP F+++I H N ++
Sbjct: 46 IEGPVGTPYENGLFRMKLALSHDFPHSPPKGYFMTKIFHPNVASN 90
>At1g50490.1 68414.m05662 ubiquitin-conjugating enzyme 20 (UBC20)
nearly identical to ubiquitin-conjugating enzyme UBC20
[Arabidopsis thaliana] GI:22530867; contains Pfam
profile PF00179: Ubiquitin-conjugating enzyme
Length = 180
Score = 35.9 bits (79), Expect = 0.031
Identities = 20/74 (27%), Positives = 31/74 (41%), Gaps = 1/74 (1%)
Frame = +3
Query: 291 WTGMIIGPPRTPYENRMYSLKIECGTRYPDEPPTARFISRIHMNCVNSQTGLVDNRQVPI 470
W G I G T +E Y L + YP +PP +F C + + N + I
Sbjct: 67 WKGTITGSKDTVFEGTEYRLSLSFSNDYPFKPPKVKF----ETCCFHPNVDVYGNICLDI 122
Query: 471 LA-RWQRDYTIKTV 509
L +W Y ++T+
Sbjct: 123 LQDKWSSAYDVRTI 136
>At5g42990.1 68418.m05243 ubiquitin-conjugating enzyme 18 (UBC18)
E2; identical to gi:2801448
Length = 161
Score = 34.3 bits (75), Expect = 0.096
Identities = 15/41 (36%), Positives = 20/41 (48%)
Frame = +3
Query: 282 LTHWTGMIIGPPRTPYENRMYSLKIECGTRYPDEPPTARFI 404
L W + G P T Y N Y+L++E YP E P F+
Sbjct: 43 LQKWVIEVTGAPGTLYANETYNLQVEFPQHYPMEAPQVIFV 83
>At5g56150.2 68418.m07005 ubiquitin-conjugating enzyme, putative
strong similarity to ubiquitin-conjugating enzyme UBC2
[Mesembryanthemum crystallinum] GI:5762457, UBC4 [Pisum
sativum] GI:456568; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 148
Score = 33.9 bits (74), Expect = 0.13
Identities = 16/55 (29%), Positives = 28/55 (50%)
Frame = +3
Query: 270 DDMTLTHWTGMIIGPPRTPYENRMYSLKIECGTRYPDEPPTARFISRIHMNCVNS 434
DDM W I+GP +P+ ++ + I YP +PP F ++++ +NS
Sbjct: 28 DDMF--QWQATIMGPADSPFAGGVFLVTIHFPPDYPFKPPKVAFRTKVYHPNINS 80
>At5g56150.1 68418.m07004 ubiquitin-conjugating enzyme, putative
strong similarity to ubiquitin-conjugating enzyme UBC2
[Mesembryanthemum crystallinum] GI:5762457, UBC4 [Pisum
sativum] GI:456568; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 148
Score = 33.9 bits (74), Expect = 0.13
Identities = 16/55 (29%), Positives = 28/55 (50%)
Frame = +3
Query: 270 DDMTLTHWTGMIIGPPRTPYENRMYSLKIECGTRYPDEPPTARFISRIHMNCVNS 434
DDM W I+GP +P+ ++ + I YP +PP F ++++ +NS
Sbjct: 28 DDMF--QWQATIMGPADSPFAGGVFLVTIHFPPDYPFKPPKVAFRTKVYHPNINS 80
>At3g20060.1 68416.m02537 ubiquitin-conjugating enzyme 19 (UBC19)
nearly identical to ubiquitin-conjugating enzyme UBC19
[Arabidopsis thaliana] GI:22530865; contains Pfam
profile PF00179: Ubiquitin-conjugating enzyme
Length = 181
Score = 33.5 bits (73), Expect = 0.17
Identities = 20/74 (27%), Positives = 30/74 (40%), Gaps = 1/74 (1%)
Frame = +3
Query: 291 WTGMIIGPPRTPYENRMYSLKIECGTRYPDEPPTARFISRIHMNCVNSQTGLVDNRQVPI 470
W G I G T +E Y L + YP + P +F C + L N + I
Sbjct: 68 WKGTITGSKDTVFEGTEYRLSLTFSNDYPFKSPKVKF----ETCCFHPNVDLYGNICLDI 123
Query: 471 LA-RWQRDYTIKTV 509
L +W Y ++T+
Sbjct: 124 LQDKWSSAYDVRTI 137
>At2g46030.1 68415.m05726 ubiquitin-conjugating enzyme 6 (UBC6) E2;
identical to gi|431267, SP:P42750, PIR:S52661; contains
a ubiquitin-conjugating enzymes active site (PDOC00163)
Length = 183
Score = 33.5 bits (73), Expect = 0.17
Identities = 16/61 (26%), Positives = 34/61 (55%)
Frame = +3
Query: 267 DDDMTLTHWTGMIIGPPRTPYENRMYSLKIECGTRYPDEPPTARFISRIHMNCVNSQTGL 446
+DD+ + + T GP + Y+ ++ +K+E YP + P+ F+++I+ V+ +G
Sbjct: 26 NDDLQMFYVT--FHGPTDSLYQGGVWKIKVELPEAYPYKSPSVGFVNKIYHPNVDESSGA 83
Query: 447 V 449
V
Sbjct: 84 V 84
>At1g75440.1 68414.m08763 ubiquitin-conjugating enzyme 16 (UBC16)
E2; identical to gi:2801444, GB:AAC39325 from
[Arabidopsis thaliana] (Plant Mol. Biol. 23 (2), 387-396
(1993))
Length = 161
Score = 33.5 bits (73), Expect = 0.17
Identities = 15/41 (36%), Positives = 20/41 (48%)
Frame = +3
Query: 282 LTHWTGMIIGPPRTPYENRMYSLKIECGTRYPDEPPTARFI 404
L W +IG P T Y N Y L+++ YP E P F+
Sbjct: 43 LQRWIIEVIGAPGTLYANDTYQLQVDFPEHYPMESPQVIFL 83
>At1g63800.1 68414.m07220 ubiquitin-conjugating enzyme 5 (UBC5) E2;
identical to gi:431269, SP:P42749
Length = 185
Score = 32.7 bits (71), Expect = 0.29
Identities = 14/47 (29%), Positives = 27/47 (57%)
Frame = +3
Query: 309 GPPRTPYENRMYSLKIECGTRYPDEPPTARFISRIHMNCVNSQTGLV 449
GP + YE ++ +++E YP + P+ FI++I+ V+ +G V
Sbjct: 38 GPKDSIYEGGVWKIRVELPDAYPYKSPSVGFITKIYHPNVDEMSGSV 84
>At2g33770.1 68415.m04141 ubiquitin-conjugating enzyme family
protein low similarity to ubiquitin-conjugating
BIR-domain enzyme APOLLON [Homo sapiens] GI:8489831,
ubiquitin-conjugating enzyme [Mus musculus] GI:3319990;
contains Pfam profile PF00179: Ubiquitin-conjugating
enzyme
Length = 907
Score = 31.9 bits (69), Expect = 0.51
Identities = 12/35 (34%), Positives = 19/35 (54%)
Frame = +3
Query: 303 IIGPPRTPYENRMYSLKIECGTRYPDEPPTARFIS 407
++G P TPY + ++ I +YP EPP + S
Sbjct: 698 LVGAPGTPYHDGLFFFDIMLPPQYPHEPPMVHYHS 732
>At4g36410.1 68417.m05173 ubiquitin-conjugating enzyme 17 (UBC17)
E2; identical to gi:2801446
Length = 161
Score = 31.5 bits (68), Expect = 0.68
Identities = 15/40 (37%), Positives = 18/40 (45%)
Frame = +3
Query: 282 LTHWTGMIIGPPRTPYENRMYSLKIECGTRYPDEPPTARF 401
L W + G P T Y N Y L++E YP E P F
Sbjct: 43 LQRWIIEVHGVPGTLYANETYQLQVEFPEHYPMEAPQVIF 82
>At5g41340.1 68418.m05024 ubiquitin-conjugating enzyme 4 (UBC4) E2;
identical to gi:431265, SP:P42748
Length = 187
Score = 30.7 bits (66), Expect = 1.2
Identities = 13/47 (27%), Positives = 27/47 (57%)
Frame = +3
Query: 309 GPPRTPYENRMYSLKIECGTRYPDEPPTARFISRIHMNCVNSQTGLV 449
GP + Y+ ++ +++E YP + P+ FI++I+ V+ +G V
Sbjct: 38 GPKDSLYQGGVWKIRVELPDAYPYKSPSVGFITKIYHPNVDELSGSV 84
>At3g17000.1 68416.m02171 ubiquitin-conjugating enzyme, putative
similar to Non-Canonical UBiquitin Conjugating Enzyme 1
(NCUBE1) from [Gallus gallus] GI:7362937, [Mus musculus]
GI:7363050, [Homo sapiens] GI:7362973; contains Pfam
profile PF00179: Ubiquitin-conjugating enzyme
Length = 309
Score = 30.3 bits (65), Expect = 1.6
Identities = 23/87 (26%), Positives = 39/87 (44%), Gaps = 6/87 (6%)
Frame = +3
Query: 264 SDDDMTLT------HWTGMIIGPPRTPYENRMYSLKIECGTRYPDEPPTARFISRIHMNC 425
SDD M+L W I GP T +E +Y +I+ YP +PP+ ++
Sbjct: 28 SDDFMSLPLEENIFEWQFAIRGPGDTEFEGGIYHGRIQLPADYPFKPPSFMLLTPNGRFE 87
Query: 426 VNSQTGLVDNRQVPILARWQRDYTIKT 506
N++ L + P WQ ++++T
Sbjct: 88 TNTKICLSISNYHP--EHWQPSWSVRT 112
>At1g53020.1 68414.m06002 ubiquitin-conjugating enzyme family
protein similar to ubiquitin-conjugating enzyme
GB:3319990 from [Mus musculus]; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 1163
Score = 29.9 bits (64), Expect = 2.1
Identities = 16/47 (34%), Positives = 23/47 (48%), Gaps = 3/47 (6%)
Frame = +3
Query: 300 MIIGPPRTPYENRMYSLKIECGTRYPDEPPTARFIS---RIHMNCVN 431
+IIG TPY + ++ I+ YP PP + S RI+ N N
Sbjct: 306 VIIGAEGTPYHDGLFFFDIQFPDTYPSVPPNVHYHSGGLRINPNLYN 352
Score = 29.5 bits (63), Expect = 2.7
Identities = 18/53 (33%), Positives = 25/53 (47%), Gaps = 3/53 (5%)
Frame = +3
Query: 300 MIIGPPRTPYENRMYSLKIECGTRYPDEPPTARFIS---RIHMNCVNSQTGLV 449
+IIG TPY + ++ I+ YP PP + S RI+ N N LV
Sbjct: 952 VIIGAEGTPYHDGLFFFDIQFPDTYPSVPPNVYYHSGGLRINPNLYNCGKVLV 1004
Score = 28.3 bits (60), Expect = 6.3
Identities = 12/36 (33%), Positives = 18/36 (50%)
Frame = +3
Query: 300 MIIGPPRTPYENRMYSLKIECGTRYPDEPPTARFIS 407
+IIG TPY + ++ I+ YP PP + S
Sbjct: 640 VIIGAEGTPYHDGLFFFDIQFPDTYPSVPPKVHYHS 675
>At1g55915.1 68414.m06413 expressed protein similar to Hypothetical
30.6 kDa protein in ACT5-YCK1 intergenic region
(Swiss-Prot:P38838) [Saccharomyces cerevisiae]; similar
to Yhr134wp (GI:500671) [Saccharomyces cerevisiae]
Length = 404
Score = 29.5 bits (63), Expect = 2.7
Identities = 15/35 (42%), Positives = 19/35 (54%)
Frame = -2
Query: 380 IRVSCSTFNFKGVHSILVGCPWWANNHSSPMSKSH 276
IR +C++ N K V C W+N HS P S SH
Sbjct: 236 IRETCTSVNGKSVKR----CNSWSNAHSCPPSSSH 266
>At2g47210.1 68415.m05896 myb family transcription factor contains
Pfam profile: PF00249 myb DNA-binding domain
Length = 441
Score = 29.1 bits (62), Expect = 3.6
Identities = 17/61 (27%), Positives = 26/61 (42%), Gaps = 1/61 (1%)
Frame = +3
Query: 204 RRT*TRPKGSGRWNHFLGLESDDDMTLTHWTGMIIG-PPRTPYENRMYSLKIECGTRYPD 380
RR K + +W F DD+ L HW ++ PP Y Y+ ++ +Y D
Sbjct: 60 RRPPADEKVAWKWLSFTNSARKDDLQLYHWVRVVNDVPPTGDYSFAKYNKSVDI-LKYTD 118
Query: 381 E 383
E
Sbjct: 119 E 119
>At1g66700.3 68414.m07582 S-adenosyl-L-methionine:carboxyl
methyltransferase family protein similar to
defense-related protein cjs1 [Brassica
carinata][GI:14009292][Mol Plant Pathol (2001)
2(3):159-169]
Length = 259
Score = 29.1 bits (62), Expect = 3.6
Identities = 13/41 (31%), Positives = 23/41 (56%)
Frame = +2
Query: 536 LKDNMKLSQPPEGSTF*FLQSSLNRPNLLSHKTIILK*INC 658
L+D +K+S+ P+G+ F+ SL+ H I++ NC
Sbjct: 215 LRDGVKMSETPKGTVMDFIGESLSDLAKQVHNLIVIVLYNC 255
>At3g18060.1 68416.m02297 transducin family protein / WD-40 repeat
family protein similar to 66 kDa stress protein
(SP:P90587) [Physarum polycephalum (Slime mold)];
similar to WDR1 protein GB:AAD05042 [Gallus gallus]
(Genomics 56 (1), 59-69 (1999)); contains 11 WD-40
repeats (PF00400)
Length = 609
Score = 28.7 bits (61), Expect = 4.8
Identities = 15/41 (36%), Positives = 20/41 (48%)
Frame = -2
Query: 347 GVHSILVGCPWWANNHSSPMSKSHIIIAFKTQEMVPSPTPF 225
GV +LVGC W N+H +S I F ++ SP F
Sbjct: 281 GVDDMLVGC-LWQNDHIVTVSLGGTISIFSASDLDKSPFQF 320
>At5g16590.1 68418.m01942 leucine-rich repeat transmembrane protein
kinase, putative
Length = 625
Score = 27.9 bits (59), Expect = 8.3
Identities = 10/26 (38%), Positives = 17/26 (65%)
Frame = +3
Query: 336 RMYSLKIECGTRYPDEPPTARFISRI 413
R+ ++ I C T+YPD PT ++R+
Sbjct: 584 RLLNIGISCTTQYPDSRPTMPEVTRL 609
>At3g57870.1 68416.m06451 ubiquitin-conjugating enzyme, putative
strong similarity to SP|P50550 Ubiquitin-like protein
SUMO-1 conjugating enzyme (EC 6.3.2.19) (SUMO- 1-protein
ligase) (Ubiquitin carrier protein)
(Ubiquitin-conjugating enzyme UbcE2A) {Xenopus laevis};
contains Pfam profile PF00179: Ubiquitin-conjugating
enzyme
Length = 160
Score = 27.9 bits (59), Expect = 8.3
Identities = 13/45 (28%), Positives = 19/45 (42%)
Frame = +3
Query: 267 DDDMTLTHWTGMIIGPPRTPYENRMYSLKIECGTRYPDEPPTARF 401
D + L W I G T +E + L + YP +PP +F
Sbjct: 34 DGTVNLMVWHCTIPGKAGTDWEGGFFPLTMHFSEDYPSKPPKCKF 78
>At3g15355.1 68416.m01945 ubiquitin-conjugating enzyme-related
similar to ubiquitin-conjugating enzyme (GI:3319990)
[Mus musculus]; similar to Baculoviral IAP
repeat-containing protein 6 (Ubiquitin-conjugating
BIR-domain enzyme apollon) (Swiss-Prot:Q9NR09) [Homo
sapiens];
Length = 609
Score = 27.9 bits (59), Expect = 8.3
Identities = 16/47 (34%), Positives = 22/47 (46%), Gaps = 3/47 (6%)
Frame = +3
Query: 300 MIIGPPRTPYENRMYSLKIECGTRYPDEPPTARFIS---RIHMNCVN 431
+IIG TPY + ++ I YP PP + S RI+ N N
Sbjct: 367 VIIGAQGTPYHDGLFFFDIFFPDTYPSTPPIVHYHSGGLRINPNLYN 413
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,186,769
Number of Sequences: 28952
Number of extensions: 364121
Number of successful extensions: 890
Number of sequences better than 10.0: 57
Number of HSP's better than 10.0 without gapping: 858
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 887
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 1824072800
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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