Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV120360.Seq
(685 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P12828 Cluster: Early 40.9 kDa protein; n=5; Nucleopoly... 213 4e-54
UniRef50_O10278 Cluster: Putative early 40.3 kDa protein; n=8; N... 93 6e-18
UniRef50_Q9ZRJ0 Cluster: Retrotransposon Tto1 DNA; n=17; Eukaryo... 35 1.6
UniRef50_A0EYZ5 Cluster: Putative uncharacterized protein; n=1; ... 35 2.1
UniRef50_Q62J76 Cluster: ABC transporter, periplasmic substrate-... 33 8.6
UniRef50_Q6ILB7 Cluster: HDC09852; n=1; Drosophila melanogaster|... 33 8.6
UniRef50_A2EH30 Cluster: Putative uncharacterized protein; n=1; ... 33 8.6
UniRef50_Q6C768 Cluster: Similar to DEHA0A13277g Debaryomyces ha... 33 8.6
>UniRef50_P12828 Cluster: Early 40.9 kDa protein; n=5;
Nucleopolyhedrovirus|Rep: Early 40.9 kDa protein -
Autographa californica nuclear polyhedrosis virus
(AcMNPV)
Length = 353
Score = 213 bits (519), Expect = 4e-54
Identities = 101/143 (70%), Positives = 112/143 (78%)
Frame = +1
Query: 256 KSALKCIDFDYYGLCSKKMFCNLQTNLQKCVDQHYAELDVLTRQIYMSNPLVMLKCYQNG 435
+SALKCIDFDYYG C+K MFCNLQTNLQKCVDQHYAELDVLTRQ+YMS+PLV+LKCYQNG
Sbjct: 69 RSALKCIDFDYYGFCAK-MFCNLQTNLQKCVDQHYAELDVLTRQVYMSDPLVVLKCYQNG 127
Query: 436 AYRLNGQIDLHLNRHIKCIKTQYNVSLIWLDLHYKLI*QAHTASTSIPTTALK*PQPRCS 615
AYRLNGQI+LHLNRHIKCIKTQYN + ++ + +K S
Sbjct: 128 AYRLNGQINLHLNRHIKCIKTQYNDEFDLVRFALQIDITSADGVDEYTDNGVKITTAPLS 187
Query: 616 FNVFFVNVRIMKRPFNADRCIKN 684
FNVFFVNVRIMKRPFNADRCIKN
Sbjct: 188 FNVFFVNVRIMKRPFNADRCIKN 210
Score = 146 bits (353), Expect = 6e-34
Identities = 69/70 (98%), Positives = 69/70 (98%)
Frame = +2
Query: 47 MERLLNQLNLGVLPYITTKDIEDRLRDKIVAKAKLAFIKDCFEAVVCENGGLFVLTGGAA 226
MERLLNQLNLGVLPYITTKDIEDRLRDKIVAKAKLAFIKDCFEAVVCENGGLFVLTGGAA
Sbjct: 1 MERLLNQLNLGVLPYITTKDIEDRLRDKIVAKAKLAFIKDCFEAVVCENGGLFVLTGGAA 60
Query: 227 VTCHIDDDDS 256
VTCHIDDD S
Sbjct: 61 VTCHIDDDRS 70
>UniRef50_O10278 Cluster: Putative early 40.3 kDa protein; n=8;
Nucleopolyhedrovirus|Rep: Putative early 40.3 kDa
protein - Orgyia pseudotsugata multicapsid polyhedrosis
virus (OpMNPV)
Length = 355
Score = 93.1 bits (221), Expect = 6e-18
Identities = 42/68 (61%), Positives = 51/68 (75%)
Frame = +2
Query: 47 MERLLNQLNLGVLPYITTKDIEDRLRDKIVAKAKLAFIKDCFEAVVCENGGLFVLTGGAA 226
M+R+ +Q+ G LPYITT D+EDRLR++I AKA F K CFEAVV + GLFVL+GGAA
Sbjct: 1 MDRVASQIYSGALPYITTMDMEDRLRNRIAAKAGAKFFKACFEAVVADKSGLFVLSGGAA 60
Query: 227 VTCHIDDD 250
CHI DD
Sbjct: 61 TACHIGDD 68
Score = 85.0 bits (201), Expect = 2e-15
Identities = 44/143 (30%), Positives = 72/143 (50%), Gaps = 1/143 (0%)
Frame = +1
Query: 256 KSALKCIDFDYYGLCSKKM-FCNLQTNLQKCVDQHYAELDVLTRQIYMSNPLVMLKCYQN 432
++ LKC+DFDYY + + LQ LQ CV + L L + + M + L ++KC+QN
Sbjct: 69 RNVLKCLDFDYYNATQEWLQLARLQQRLQACVQDNLEILSRLAQSVRMQDDLFVVKCFQN 128
Query: 433 GAYRLNGQIDLHLNRHIKCIKTQYNVSLIWLDLHYKLI*QAHTASTSIPTTALK*PQPRC 612
GA+ NG + L ++ ++T +N L ++ +A + +
Sbjct: 129 GAFCFNGPVQARLVPCVETVRTSFNGEFDLLRFALQVELKALNGVDEYVDQKVIVDRGAA 188
Query: 613 SFNVFFVNVRIMKRPFNADRCIK 681
FNVFFVN+R MK P +RC++
Sbjct: 189 VFNVFFVNIRAMKGPLTMERCVR 211
>UniRef50_Q9ZRJ0 Cluster: Retrotransposon Tto1 DNA; n=17;
Eukaryota|Rep: Retrotransposon Tto1 DNA - Nicotiana
tabacum (Common tobacco)
Length = 1338
Score = 35.1 bits (77), Expect = 1.6
Identities = 24/65 (36%), Positives = 34/65 (52%), Gaps = 2/65 (3%)
Frame = +3
Query: 90 ILRQRILKIACAIKLWLKQSWHLSKIVSKP*FAKTEVYSC*L--EARL*HAISTTTTQKR 263
IL RI++ A KLWL Q ++ K++ + KT+ SC L RL S +T +R
Sbjct: 1045 ILGMRIMRDREAKKLWLSQEKYIEKVLQRFNMEKTKAVSCPLANHFRLSTKQSPSTDDER 1104
Query: 264 IKMHR 278
KM R
Sbjct: 1105 RKMER 1109
>UniRef50_A0EYZ5 Cluster: Putative uncharacterized protein; n=1;
Ecotropis obliqua NPV|Rep: Putative uncharacterized
protein - Ecotropis obliqua NPV
Length = 393
Score = 34.7 bits (76), Expect = 2.1
Identities = 18/60 (30%), Positives = 33/60 (55%), Gaps = 3/60 (5%)
Frame = +2
Query: 83 LPYITTKDIEDRLRDKIVAKAKLAF---IKDCFEAVVCENGGLFVLTGGAAVTCHIDDDD 253
LPYI+ K + D + + I+++ F + DC E ++ ++ GGAA+ H+ DD+
Sbjct: 14 LPYISKKAVNDAMCNYILSQMPKMFYSEVYDCVERILHRQK--CIVKGGAAIAAHLQDDN 71
>UniRef50_Q62J76 Cluster: ABC transporter, periplasmic
substrate-binding protein; n=57; Burkholderiales|Rep:
ABC transporter, periplasmic substrate-binding protein -
Burkholderia mallei (Pseudomonas mallei)
Length = 650
Score = 32.7 bits (71), Expect = 8.6
Identities = 15/43 (34%), Positives = 23/43 (53%)
Frame = -1
Query: 472 LSANRFDRLVYRLRFDNISALPTDLTCKFDALTRPIQRNVGRR 344
+ N F+R+VY+L D ++ L ++D L I RN RR
Sbjct: 289 IGTNNFERIVYKLYGDGVARLEAFKAGEYDVLVEYIARNWARR 331
>UniRef50_Q6ILB7 Cluster: HDC09852; n=1; Drosophila
melanogaster|Rep: HDC09852 - Drosophila melanogaster
(Fruit fly)
Length = 242
Score = 32.7 bits (71), Expect = 8.6
Identities = 25/103 (24%), Positives = 42/103 (40%)
Frame = +1
Query: 262 ALKCIDFDYYGLCSKKMFCNLQTNLQKCVDQHYAELDVLTRQIYMSNPLVMLKCYQNGAY 441
A+ + ++ + M+ +T+L VD L L ++ + + C G
Sbjct: 2 AVSVVSSGHHSALLEVMYSGHKTHLIVIVDSRLKSLPDLGHELSLG----LAPCLSTGKA 57
Query: 442 RLNGQIDLHLNRHIKCIKTQYNVSLIWLDLHYKLI*QAHTAST 570
RLN H CI+ Q+N SL+ HY + A T+ T
Sbjct: 58 RLNCHSMAKWRLHPDCIRRQWNSSLLLSHWHYWVALLAPTSCT 100
>UniRef50_A2EH30 Cluster: Putative uncharacterized protein; n=1;
Trichomonas vaginalis G3|Rep: Putative uncharacterized
protein - Trichomonas vaginalis G3
Length = 977
Score = 32.7 bits (71), Expect = 8.6
Identities = 19/71 (26%), Positives = 32/71 (45%)
Frame = +3
Query: 411 NAEMLSKRSL*TKRSNRFALKPPYKMHKNTVQREFDLVRFALQIDITSAYGVDEYTDNCV 590
NAE+L L K+ NR+ P + K ++ +++R ID+ A G + +
Sbjct: 834 NAELLLSAGLSPKKKNRWLRSPMFNAFKGSMNEPINILRSLTMIDLLIAKGGNVNETDSR 893
Query: 591 KITTAPLFFQR 623
T A F+R
Sbjct: 894 NSTPAIALFER 904
>UniRef50_Q6C768 Cluster: Similar to DEHA0A13277g Debaryomyces
hansenii; n=1; Yarrowia lipolytica|Rep: Similar to
DEHA0A13277g Debaryomyces hansenii - Yarrowia lipolytica
(Candida lipolytica)
Length = 152
Score = 32.7 bits (71), Expect = 8.6
Identities = 16/44 (36%), Positives = 21/44 (47%), Gaps = 1/44 (2%)
Frame = -1
Query: 469 SANR-FDRLVYRLRFDNISALPTDLTCKFDALTRPIQRNVGRRI 341
+ NR F R+ Y FD + LPT L C F P + V R+
Sbjct: 31 TGNRVFFRIRYSQEFDQLKTLPTPLLCNFYIRNDPFSKTVSERL 74
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 612,290,342
Number of Sequences: 1657284
Number of extensions: 11246936
Number of successful extensions: 29041
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 28174
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29028
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 53305790091
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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