Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120358.Seq
         (791 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A2E1I2 Cluster: Putative uncharacterized protein; n=1; ...    35   2.0  
UniRef50_UPI00015A5DF8 Cluster: UPI00015A5DF8 related cluster; n...    34   4.7  
UniRef50_A5IYR2 Cluster: Putative uncharacterized protein; n=1; ...    33   6.2  

>UniRef50_A2E1I2 Cluster: Putative uncharacterized protein; n=1;
            Trichomonas vaginalis G3|Rep: Putative uncharacterized
            protein - Trichomonas vaginalis G3
          Length = 1535

 Score = 35.1 bits (77), Expect = 2.0
 Identities = 18/41 (43%), Positives = 24/41 (58%)
 Frame = -2

Query: 610  IKTSTDADTK*NGPIITNMSRIKRNVA*TK*PFTLDINSRF 488
            IK   D   +  GPI+TN+SRI R V+  + PF  DI S +
Sbjct: 1158 IKFLLDEKCQNTGPILTNLSRIFRRVSCARFPFIFDIMSEY 1198


>UniRef50_UPI00015A5DF8 Cluster: UPI00015A5DF8 related cluster; n=1;
           Danio rerio|Rep: UPI00015A5DF8 UniRef100 entry - Danio
           rerio
          Length = 1024

 Score = 33.9 bits (74), Expect = 4.7
 Identities = 18/58 (31%), Positives = 28/58 (48%)
 Frame = -1

Query: 353 YALTCVTSYFRKKYRSKFKSDLNIVLXXXXXXXXXRILE*ISKDLVASRNLKTYNAIY 180
           Y    V  YF KK ++KFK D N++             + +SK     +N KT+++IY
Sbjct: 778 YRYLQVRDYFNKKIKNKFKDDSNLITVFADAYIKEENKKLVSKLYECIQNSKTHSSIY 835


>UniRef50_A5IYR2 Cluster: Putative uncharacterized protein; n=1;
           Mycoplasma agalactiae|Rep: Putative uncharacterized
           protein - Mycoplasma agalactiae
          Length = 297

 Score = 33.5 bits (73), Expect = 6.2
 Identities = 14/38 (36%), Positives = 26/38 (68%)
 Frame = -2

Query: 373 YIHAVLNTLLPVLPHTLEKNIDPNSSQT*TLCYAGKSN 260
           YI  ++N  LP++P+++E+N+  +S QT  + YA  S+
Sbjct: 166 YIKTIINNNLPIIPYSIERNVGFHSEQTNDI-YASASS 202


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 690,082,611
Number of Sequences: 1657284
Number of extensions: 12741951
Number of successful extensions: 25827
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 24786
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25824
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 67496806780
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)