Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV120356.Seq
(770 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC084159-7|AAK39370.2| 277|Caenorhabditis elegans Hypothetical ... 30 1.6
Z71266-12|CAA95848.1| 1938|Caenorhabditis elegans Hypothetical p... 29 2.8
Z71261-8|CAA95806.1| 1938|Caenorhabditis elegans Hypothetical pr... 29 2.8
X08065-1|CAA30854.1| 1938|Caenorhabditis elegans myosin 1 protein. 29 2.8
M37232-1|AAA28119.1| 251|Caenorhabditis elegans myosin I protein. 29 2.8
AF067217-2|AAF99977.1| 1887|Caenorhabditis elegans Heavy chain, ... 29 2.8
Z83107-10|CAB05505.1| 1963|Caenorhabditis elegans Hypothetical p... 29 4.8
Z81499-3|CAB04089.1| 1963|Caenorhabditis elegans Hypothetical pr... 29 4.8
Z70207-8|CAM33501.1| 835|Caenorhabditis elegans Hypothetical pr... 29 4.8
Z70207-5|CAA94127.2| 914|Caenorhabditis elegans Hypothetical pr... 29 4.8
Z68119-8|CAA92197.2| 1947|Caenorhabditis elegans Hypothetical pr... 29 4.8
Z68117-6|CAA92183.2| 1947|Caenorhabditis elegans Hypothetical pr... 29 4.8
X08066-1|CAA30855.1| 1947|Caenorhabditis elegans myosin heavy ch... 29 4.8
M37233-1|AAA28121.1| 260|Caenorhabditis elegans myosin II protein. 29 4.8
J01050-1|AAA28124.1| 1966|Caenorhabditis elegans myosin heavy ch... 29 4.8
AF316542-1|AAG50270.1| 914|Caenorhabditis elegans serine/threon... 29 4.8
U13646-1|AAC24418.2| 2585|Caenorhabditis elegans Hypothetical pr... 28 6.4
AF077536-4|AAK31409.1| 726|Caenorhabditis elegans Hypothetical ... 28 6.4
Z74041-6|CAA98517.2| 337|Caenorhabditis elegans Hypothetical pr... 28 8.5
Z73977-2|CAA98291.2| 349|Caenorhabditis elegans Hypothetical pr... 28 8.5
Z73968-1|CAA98230.2| 349|Caenorhabditis elegans Hypothetical pr... 28 8.5
Z73425-2|CAA97788.1| 1126|Caenorhabditis elegans Hypothetical pr... 28 8.5
>AC084159-7|AAK39370.2| 277|Caenorhabditis elegans Hypothetical
protein Y73B3A.16 protein.
Length = 277
Score = 30.3 bits (65), Expect = 1.6
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = -2
Query: 649 NVDTLPAFTIAFCVISFDNVRALRQNNGPKFGI 551
NV + T CV+ F N R +RQ+ PK+ +
Sbjct: 111 NVCFIQPSTFHVCVVDFGNARTIRQDKPPKYAL 143
>Z71266-12|CAA95848.1| 1938|Caenorhabditis elegans Hypothetical
protein R06C7.10 protein.
Length = 1938
Score = 29.5 bits (63), Expect = 2.8
Identities = 17/52 (32%), Positives = 28/52 (53%)
Frame = -2
Query: 604 SFDNVRALRQNNGPKFGIN*IDIHAVRYQNVLSSASLPMYLMTVSMMIFKTP 449
+F N + +R NN +FG I IH ++ L+S + YL+ S +I + P
Sbjct: 227 AFGNAKTVRNNNSSRFG-KFIRIHFNKH-GTLASCDIEHYLLEKSRVIRQAP 276
>Z71261-8|CAA95806.1| 1938|Caenorhabditis elegans Hypothetical
protein R06C7.10 protein.
Length = 1938
Score = 29.5 bits (63), Expect = 2.8
Identities = 17/52 (32%), Positives = 28/52 (53%)
Frame = -2
Query: 604 SFDNVRALRQNNGPKFGIN*IDIHAVRYQNVLSSASLPMYLMTVSMMIFKTP 449
+F N + +R NN +FG I IH ++ L+S + YL+ S +I + P
Sbjct: 227 AFGNAKTVRNNNSSRFG-KFIRIHFNKH-GTLASCDIEHYLLEKSRVIRQAP 276
>X08065-1|CAA30854.1| 1938|Caenorhabditis elegans myosin 1 protein.
Length = 1938
Score = 29.5 bits (63), Expect = 2.8
Identities = 17/52 (32%), Positives = 28/52 (53%)
Frame = -2
Query: 604 SFDNVRALRQNNGPKFGIN*IDIHAVRYQNVLSSASLPMYLMTVSMMIFKTP 449
+F N + +R NN +FG I IH ++ L+S + YL+ S +I + P
Sbjct: 227 AFGNAKTVRNNNSSRFG-KFIRIHFNKH-GTLASCDIEHYLLEKSRVIRQAP 276
>M37232-1|AAA28119.1| 251|Caenorhabditis elegans myosin I protein.
Length = 251
Score = 29.5 bits (63), Expect = 2.8
Identities = 17/52 (32%), Positives = 28/52 (53%)
Frame = -2
Query: 604 SFDNVRALRQNNGPKFGIN*IDIHAVRYQNVLSSASLPMYLMTVSMMIFKTP 449
+F N + +R NN +FG I IH ++ L+S + YL+ S +I + P
Sbjct: 113 AFGNAKTVRNNNSSRFG-KFIRIHFNKH-GTLASCDIEHYLLEKSRVIRQAP 162
>AF067217-2|AAF99977.1| 1887|Caenorhabditis elegans Heavy chain,
unconventional myosinprotein 7 protein.
Length = 1887
Score = 29.5 bits (63), Expect = 2.8
Identities = 18/51 (35%), Positives = 29/51 (56%)
Frame = -2
Query: 604 SFDNVRALRQNNGPKFGIN*IDIHAVRYQNVLSSASLPMYLMTVSMMIFKT 452
+F N L NN +FG I I+ R ++S A++ +YL+ S +IF+T
Sbjct: 304 AFGNAVTLTNNNSSRFG-KFIKIN-YRENGMVSGANVEIYLLEKSRIIFQT 352
>Z83107-10|CAB05505.1| 1963|Caenorhabditis elegans Hypothetical
protein F11C3.3 protein.
Length = 1963
Score = 28.7 bits (61), Expect = 4.8
Identities = 17/52 (32%), Positives = 28/52 (53%)
Frame = -2
Query: 604 SFDNVRALRQNNGPKFGIN*IDIHAVRYQNVLSSASLPMYLMTVSMMIFKTP 449
+F N + +R NN +FG I IH ++ L+S + YL+ S +I + P
Sbjct: 227 AFGNAKTVRNNNSSRFG-KFIRIHFNKHGR-LASCDIEHYLLEKSRVIRQAP 276
>Z81499-3|CAB04089.1| 1963|Caenorhabditis elegans Hypothetical
protein F11C3.3 protein.
Length = 1963
Score = 28.7 bits (61), Expect = 4.8
Identities = 17/52 (32%), Positives = 28/52 (53%)
Frame = -2
Query: 604 SFDNVRALRQNNGPKFGIN*IDIHAVRYQNVLSSASLPMYLMTVSMMIFKTP 449
+F N + +R NN +FG I IH ++ L+S + YL+ S +I + P
Sbjct: 227 AFGNAKTVRNNNSSRFG-KFIRIHFNKHGR-LASCDIEHYLLEKSRVIRQAP 276
>Z70207-8|CAM33501.1| 835|Caenorhabditis elegans Hypothetical
protein F15A2.6b protein.
Length = 835
Score = 28.7 bits (61), Expect = 4.8
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = +2
Query: 611 AESDSESGQSVDVCNELKYPWNLITANSFIVSTDES 718
AESDSE Q +D + +K W A+S V D++
Sbjct: 617 AESDSEDSQMIDTTDLVKKSWFGSLASSMSVERDDT 652
>Z70207-5|CAA94127.2| 914|Caenorhabditis elegans Hypothetical
protein F15A2.6a protein.
Length = 914
Score = 28.7 bits (61), Expect = 4.8
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = +2
Query: 611 AESDSESGQSVDVCNELKYPWNLITANSFIVSTDES 718
AESDSE Q +D + +K W A+S V D++
Sbjct: 617 AESDSEDSQMIDTTDLVKKSWFGSLASSMSVERDDT 652
>Z68119-8|CAA92197.2| 1947|Caenorhabditis elegans Hypothetical
protein T18D3.4 protein.
Length = 1947
Score = 28.7 bits (61), Expect = 4.8
Identities = 17/52 (32%), Positives = 28/52 (53%)
Frame = -2
Query: 604 SFDNVRALRQNNGPKFGIN*IDIHAVRYQNVLSSASLPMYLMTVSMMIFKTP 449
+F N + +R NN +FG I IH + Q ++S + YL+ S +I + P
Sbjct: 233 AFGNAKTVRNNNSSRFG-KFIRIHFSK-QGRVASCDIEHYLLEKSRVIRQAP 282
>Z68117-6|CAA92183.2| 1947|Caenorhabditis elegans Hypothetical
protein T18D3.4 protein.
Length = 1947
Score = 28.7 bits (61), Expect = 4.8
Identities = 17/52 (32%), Positives = 28/52 (53%)
Frame = -2
Query: 604 SFDNVRALRQNNGPKFGIN*IDIHAVRYQNVLSSASLPMYLMTVSMMIFKTP 449
+F N + +R NN +FG I IH + Q ++S + YL+ S +I + P
Sbjct: 233 AFGNAKTVRNNNSSRFG-KFIRIHFSK-QGRVASCDIEHYLLEKSRVIRQAP 282
>X08066-1|CAA30855.1| 1947|Caenorhabditis elegans myosin heavy chain
2 protein.
Length = 1947
Score = 28.7 bits (61), Expect = 4.8
Identities = 17/52 (32%), Positives = 28/52 (53%)
Frame = -2
Query: 604 SFDNVRALRQNNGPKFGIN*IDIHAVRYQNVLSSASLPMYLMTVSMMIFKTP 449
+F N + +R NN +FG I IH + Q ++S + YL+ S +I + P
Sbjct: 233 AFGNAKTVRNNNSSRFG-KFIRIHFSK-QGRVASCDIEHYLLEKSRVIRQAP 282
>M37233-1|AAA28121.1| 260|Caenorhabditis elegans myosin II protein.
Length = 260
Score = 28.7 bits (61), Expect = 4.8
Identities = 17/52 (32%), Positives = 28/52 (53%)
Frame = -2
Query: 604 SFDNVRALRQNNGPKFGIN*IDIHAVRYQNVLSSASLPMYLMTVSMMIFKTP 449
+F N + +R NN +FG I IH + Q ++S + YL+ S +I + P
Sbjct: 122 AFGNAKTVRNNNSSRFG-KFIRIHFSK-QGRVASCDIEHYLLEKSRVIRQAP 171
>J01050-1|AAA28124.1| 1966|Caenorhabditis elegans myosin heavy chain
protein.
Length = 1966
Score = 28.7 bits (61), Expect = 4.8
Identities = 17/52 (32%), Positives = 28/52 (53%)
Frame = -2
Query: 604 SFDNVRALRQNNGPKFGIN*IDIHAVRYQNVLSSASLPMYLMTVSMMIFKTP 449
+F N + +R NN +FG I IH ++ L+S + YL+ S +I + P
Sbjct: 230 AFGNAKTVRNNNSSRFG-KFIRIHFNKHGR-LASCDIEHYLLEKSRVIRQAP 279
>AF316542-1|AAG50270.1| 914|Caenorhabditis elegans serine/threonine
kinase SAD-1 protein.
Length = 914
Score = 28.7 bits (61), Expect = 4.8
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = +2
Query: 611 AESDSESGQSVDVCNELKYPWNLITANSFIVSTDES 718
AESDSE Q +D + +K W A+S V D++
Sbjct: 617 AESDSEDSQMIDTTDLVKKSWFGSLASSMSVERDDT 652
>U13646-1|AAC24418.2| 2585|Caenorhabditis elegans Hypothetical protein
ZK783.1 protein.
Length = 2585
Score = 28.3 bits (60), Expect = 6.4
Identities = 18/49 (36%), Positives = 22/49 (44%), Gaps = 1/49 (2%)
Frame = +1
Query: 232 DPDNENDIC-T*PC*TACF*TSTQNCIIGTCCATIKPRREKQFSTPTTC 375
+P N+ D+ C T C +STQ CI G C RR S TC
Sbjct: 2262 EPANQQDLSDVSSCVTPCD-SSTQLCISGECICKSGFRRNSTLSGSETC 2309
>AF077536-4|AAK31409.1| 726|Caenorhabditis elegans Hypothetical
protein C16A11.3 protein.
Length = 726
Score = 28.3 bits (60), Expect = 6.4
Identities = 9/21 (42%), Positives = 14/21 (66%)
Frame = -2
Query: 613 CVISFDNVRALRQNNGPKFGI 551
CV+ F N R +RQ+ PK+ +
Sbjct: 561 CVVDFGNARTIRQDKPPKYAL 581
>Z74041-6|CAA98517.2| 337|Caenorhabditis elegans Hypothetical
protein T03F7.3 protein.
Length = 337
Score = 27.9 bits (59), Expect = 8.5
Identities = 13/59 (22%), Positives = 30/59 (50%)
Frame = -2
Query: 523 YQNVLSSASLPMYLMTVSMMIFKTPMLCSPASSTLLKCSVRIGLINTHSYTSSALRIVF 347
Y +++S ++P+ ++ + ++ +KTP+ +L C V GL+ + + VF
Sbjct: 23 YSHLISIIAIPVNVLGIWLIFYKTPIRMKNMKGVMLNCHV-WGLVGDFMLGTLTIPYVF 80
>Z73977-2|CAA98291.2| 349|Caenorhabditis elegans Hypothetical
protein C05A2.1 protein.
Length = 349
Score = 27.9 bits (59), Expect = 8.5
Identities = 12/35 (34%), Positives = 22/35 (62%), Gaps = 2/35 (5%)
Frame = +2
Query: 578 PQSAYIIKGDYAESDSESGQSVD--VCNELKYPWN 676
P+S Y+ GDY + +S +++ +C ++KYP N
Sbjct: 88 PESNYLFLGDYVDRGPKSIETIVLLLCYKIKYPNN 122
>Z73968-1|CAA98230.2| 349|Caenorhabditis elegans Hypothetical
protein C05A2.1 protein.
Length = 349
Score = 27.9 bits (59), Expect = 8.5
Identities = 12/35 (34%), Positives = 22/35 (62%), Gaps = 2/35 (5%)
Frame = +2
Query: 578 PQSAYIIKGDYAESDSESGQSVD--VCNELKYPWN 676
P+S Y+ GDY + +S +++ +C ++KYP N
Sbjct: 88 PESNYLFLGDYVDRGPKSIETIVLLLCYKIKYPNN 122
>Z73425-2|CAA97788.1| 1126|Caenorhabditis elegans Hypothetical protein
F12F6.6 protein.
Length = 1126
Score = 27.9 bits (59), Expect = 8.5
Identities = 22/82 (26%), Positives = 37/82 (45%), Gaps = 3/82 (3%)
Frame = +3
Query: 177 DTSSTSELQSNAST*QLFRSR*RKRHLHMTVLNSVFLNEHAKL---YYRHLLRNDQAEAR 347
D S+ +S +S F + R++ L + L E KL Y +L+ND
Sbjct: 890 DKGSSEMRESLSSRCAQFLATYREKCSEGAPLGQLILPESLKLMPLYVNSILKNDAISGG 949
Query: 348 KTILNADDVYECVLIKPIRTEH 413
+ D V++ LI+ +RTE+
Sbjct: 950 SEMTVDDKVWQMELIRGLRTEN 971
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,192,952
Number of Sequences: 27780
Number of extensions: 326360
Number of successful extensions: 918
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 886
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 918
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1851132448
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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