Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120349.Seq
         (772 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U43499-1|AAA93302.1|  278|Anopheles gambiae a-emp protein.             25   3.4  
AY745209-1|AAU93476.1|  167|Anopheles gambiae cytochrome P450 pr...    25   3.4  
AF387862-2|AAL56548.1|  942|Anopheles gambiae pol polyprotein pr...    24   4.5  

>U43499-1|AAA93302.1|  278|Anopheles gambiae a-emp protein.
          Length = 278

 Score = 24.6 bits (51), Expect = 3.4
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = +1

Query: 190 CTILPAYFDREAIMHNGLKG 249
           C +LP  F++E  +  G+KG
Sbjct: 199 CRLLPLSFEKEVTVRGGVKG 218


>AY745209-1|AAU93476.1|  167|Anopheles gambiae cytochrome P450
           protein.
          Length = 167

 Score = 24.6 bits (51), Expect = 3.4
 Identities = 10/20 (50%), Positives = 14/20 (70%)
 Frame = +2

Query: 176 RMRCIVQSFLPISIAKQSCI 235
           R+R  +  FLP SI K++CI
Sbjct: 94  RVRKNIPHFLPFSIGKRTCI 113


>AF387862-2|AAL56548.1|  942|Anopheles gambiae pol polyprotein
           protein.
          Length = 942

 Score = 24.2 bits (50), Expect = 4.5
 Identities = 12/51 (23%), Positives = 25/51 (49%)
 Frame = -3

Query: 761 YLRFSLTYLLASVRTDK*IVKNHFTYLHNVFMV*PKFMRCDALFPFRNKRI 609
           + R++  Y L        +++ + T +HN F   P  +R D    +++KR+
Sbjct: 103 FSRYTTVYFLKRKSEAAEVIEEYVTMVHNRFGRNPIVIRSDQGGEYKSKRL 153


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 797,827
Number of Sequences: 2352
Number of extensions: 16444
Number of successful extensions: 17
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 80249979
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)