Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV120348.Seq
(815 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X85134-1|CAA59446.1| 538|Homo sapiens RB protein binding protei... 33 1.6
BC075060-1|AAH75060.1| 538|Homo sapiens retinoblastoma binding ... 33 1.6
BC075059-1|AAH75059.1| 538|Homo sapiens retinoblastoma binding ... 33 1.6
BC053856-1|AAH53856.1| 538|Homo sapiens retinoblastoma binding ... 33 1.6
BC037284-1|AAH37284.1| 500|Homo sapiens RBBP5 protein protein. 33 1.6
AL583832-2|CAI15287.1| 500|Homo sapiens retinoblastoma binding ... 33 1.6
AL583832-1|CAI15286.1| 538|Homo sapiens retinoblastoma binding ... 33 1.6
X65177-1|CAA46292.1| 407|Homo sapiens substance P receptor prot... 31 6.6
S62045-1|AAB20168.2| 407|Homo sapiens NK-1 receptor protein. 31 6.6
M84426-1|AAA36644.1| 311|Homo sapiens substance P receptor (sho... 31 6.6
M84425-1|AAA36641.1| 407|Homo sapiens substance P receptor (lon... 31 6.6
M81797-1|AAA59933.1| 407|Homo sapiens NK-1 receptor protein. 31 6.6
M76675-1|AAA59936.1| 407|Homo sapiens neurokinin 1 receptor pro... 31 6.6
M74290-1|AAA60601.1| 407|Homo sapiens substance P receptor prot... 31 6.6
BC095528-1|AAH95528.1| 406|Homo sapiens TACR1 protein protein. 31 6.6
BC074912-1|AAH74912.1| 407|Homo sapiens tachykinin receptor 1 p... 31 6.6
BC074911-1|AAH74911.1| 407|Homo sapiens tachykinin receptor 1 p... 31 6.6
AY462098-1|AAR23925.1| 407|Homo sapiens tachykinin receptor 1 p... 31 6.6
AC007400-2|AAY15031.1| 212|Homo sapiens unknown protein. 31 6.6
>X85134-1|CAA59446.1| 538|Homo sapiens RB protein binding protein
protein.
Length = 538
Score = 32.7 bits (71), Expect = 1.6
Identities = 17/36 (47%), Positives = 22/36 (61%)
Frame = +3
Query: 624 ANGSVCALTTPSLNDMFSF*ASTQTSNTLALKSINF 731
A G + L T S + + SF +T TSNT A+KSI F
Sbjct: 171 AKGKILVLKTDSQDLVASFRVTTGTSNTTAIKSIEF 206
>BC075060-1|AAH75060.1| 538|Homo sapiens retinoblastoma binding
protein 5 protein.
Length = 538
Score = 32.7 bits (71), Expect = 1.6
Identities = 17/36 (47%), Positives = 22/36 (61%)
Frame = +3
Query: 624 ANGSVCALTTPSLNDMFSF*ASTQTSNTLALKSINF 731
A G + L T S + + SF +T TSNT A+KSI F
Sbjct: 171 AKGKILVLKTDSQDLVASFRVTTGTSNTTAIKSIEF 206
>BC075059-1|AAH75059.1| 538|Homo sapiens retinoblastoma binding
protein 5 protein.
Length = 538
Score = 32.7 bits (71), Expect = 1.6
Identities = 17/36 (47%), Positives = 22/36 (61%)
Frame = +3
Query: 624 ANGSVCALTTPSLNDMFSF*ASTQTSNTLALKSINF 731
A G + L T S + + SF +T TSNT A+KSI F
Sbjct: 171 AKGKILVLKTDSQDLVASFRVTTGTSNTTAIKSIEF 206
>BC053856-1|AAH53856.1| 538|Homo sapiens retinoblastoma binding
protein 5 protein.
Length = 538
Score = 32.7 bits (71), Expect = 1.6
Identities = 17/36 (47%), Positives = 22/36 (61%)
Frame = +3
Query: 624 ANGSVCALTTPSLNDMFSF*ASTQTSNTLALKSINF 731
A G + L T S + + SF +T TSNT A+KSI F
Sbjct: 171 AKGKILVLKTDSQDLVASFRVTTGTSNTTAIKSIEF 206
>BC037284-1|AAH37284.1| 500|Homo sapiens RBBP5 protein protein.
Length = 500
Score = 32.7 bits (71), Expect = 1.6
Identities = 17/36 (47%), Positives = 22/36 (61%)
Frame = +3
Query: 624 ANGSVCALTTPSLNDMFSF*ASTQTSNTLALKSINF 731
A G + L T S + + SF +T TSNT A+KSI F
Sbjct: 171 AKGKILVLKTDSQDLVASFRVTTGTSNTTAIKSIEF 206
>AL583832-2|CAI15287.1| 500|Homo sapiens retinoblastoma binding
protein 5 protein.
Length = 500
Score = 32.7 bits (71), Expect = 1.6
Identities = 17/36 (47%), Positives = 22/36 (61%)
Frame = +3
Query: 624 ANGSVCALTTPSLNDMFSF*ASTQTSNTLALKSINF 731
A G + L T S + + SF +T TSNT A+KSI F
Sbjct: 171 AKGKILVLKTDSQDLVASFRVTTGTSNTTAIKSIEF 206
>AL583832-1|CAI15286.1| 538|Homo sapiens retinoblastoma binding
protein 5 protein.
Length = 538
Score = 32.7 bits (71), Expect = 1.6
Identities = 17/36 (47%), Positives = 22/36 (61%)
Frame = +3
Query: 624 ANGSVCALTTPSLNDMFSF*ASTQTSNTLALKSINF 731
A G + L T S + + SF +T TSNT A+KSI F
Sbjct: 171 AKGKILVLKTDSQDLVASFRVTTGTSNTTAIKSIEF 206
>X65177-1|CAA46292.1| 407|Homo sapiens substance P receptor
protein.
Length = 407
Score = 30.7 bits (66), Expect = 6.6
Identities = 14/47 (29%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
Frame = +3
Query: 81 CAYTQCWYAFPFFSTINFCNLGNTCKEYCRKVPF*I-WAALCQTVYN 218
C + CW F F + + N K++ ++V I W A+ T+YN
Sbjct: 255 CTFAICWLPFHIFFLLPYINPDLYLKKFIQQVYLAIMWLAMSSTMYN 301
>S62045-1|AAB20168.2| 407|Homo sapiens NK-1 receptor protein.
Length = 407
Score = 30.7 bits (66), Expect = 6.6
Identities = 14/47 (29%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
Frame = +3
Query: 81 CAYTQCWYAFPFFSTINFCNLGNTCKEYCRKVPF*I-WAALCQTVYN 218
C + CW F F + + N K++ ++V I W A+ T+YN
Sbjct: 255 CTFAICWLPFHIFFLLPYINPDLYLKKFIQQVYLAIMWLAMSSTMYN 301
>M84426-1|AAA36644.1| 311|Homo sapiens substance P receptor (short
form) protein.
Length = 311
Score = 30.7 bits (66), Expect = 6.6
Identities = 14/47 (29%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
Frame = +3
Query: 81 CAYTQCWYAFPFFSTINFCNLGNTCKEYCRKVPF*I-WAALCQTVYN 218
C + CW F F + + N K++ ++V I W A+ T+YN
Sbjct: 255 CTFAICWLPFHIFFLLPYINPDLYLKKFIQQVYLAIMWLAMSSTMYN 301
>M84425-1|AAA36641.1| 407|Homo sapiens substance P receptor (long
form) protein.
Length = 407
Score = 30.7 bits (66), Expect = 6.6
Identities = 14/47 (29%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
Frame = +3
Query: 81 CAYTQCWYAFPFFSTINFCNLGNTCKEYCRKVPF*I-WAALCQTVYN 218
C + CW F F + + N K++ ++V I W A+ T+YN
Sbjct: 255 CTFAICWLPFHIFFLLPYINPDLYLKKFIQQVYLAIMWLAMSSTMYN 301
>M81797-1|AAA59933.1| 407|Homo sapiens NK-1 receptor protein.
Length = 407
Score = 30.7 bits (66), Expect = 6.6
Identities = 14/47 (29%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
Frame = +3
Query: 81 CAYTQCWYAFPFFSTINFCNLGNTCKEYCRKVPF*I-WAALCQTVYN 218
C + CW F F + + N K++ ++V I W A+ T+YN
Sbjct: 255 CTFAICWLPFHIFFLLPYINPDLYLKKFIQQVYLAIMWLAMSSTMYN 301
>M76675-1|AAA59936.1| 407|Homo sapiens neurokinin 1 receptor
protein.
Length = 407
Score = 30.7 bits (66), Expect = 6.6
Identities = 14/47 (29%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
Frame = +3
Query: 81 CAYTQCWYAFPFFSTINFCNLGNTCKEYCRKVPF*I-WAALCQTVYN 218
C + CW F F + + N K++ ++V I W A+ T+YN
Sbjct: 255 CTFAICWLPFHIFFLLPYINPDLYLKKFIQQVYLAIMWLAMSSTMYN 301
>M74290-1|AAA60601.1| 407|Homo sapiens substance P receptor
protein.
Length = 407
Score = 30.7 bits (66), Expect = 6.6
Identities = 14/47 (29%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
Frame = +3
Query: 81 CAYTQCWYAFPFFSTINFCNLGNTCKEYCRKVPF*I-WAALCQTVYN 218
C + CW F F + + N K++ ++V I W A+ T+YN
Sbjct: 255 CTFAICWLPFHIFFLLPYINPDLYLKKFIQQVYLAIMWLAMSSTMYN 301
>BC095528-1|AAH95528.1| 406|Homo sapiens TACR1 protein protein.
Length = 406
Score = 30.7 bits (66), Expect = 6.6
Identities = 14/47 (29%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
Frame = +3
Query: 81 CAYTQCWYAFPFFSTINFCNLGNTCKEYCRKVPF*I-WAALCQTVYN 218
C + CW F F + + N K++ ++V I W A+ T+YN
Sbjct: 254 CTFAICWLPFHIFFLLPYINPDLYLKKFIQQVYLAIMWLAMSSTMYN 300
>BC074912-1|AAH74912.1| 407|Homo sapiens tachykinin receptor 1
protein.
Length = 407
Score = 30.7 bits (66), Expect = 6.6
Identities = 14/47 (29%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
Frame = +3
Query: 81 CAYTQCWYAFPFFSTINFCNLGNTCKEYCRKVPF*I-WAALCQTVYN 218
C + CW F F + + N K++ ++V I W A+ T+YN
Sbjct: 255 CTFAICWLPFHIFFLLPYINPDLYLKKFIQQVYLAIMWLAMSSTMYN 301
>BC074911-1|AAH74911.1| 407|Homo sapiens tachykinin receptor 1
protein.
Length = 407
Score = 30.7 bits (66), Expect = 6.6
Identities = 14/47 (29%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
Frame = +3
Query: 81 CAYTQCWYAFPFFSTINFCNLGNTCKEYCRKVPF*I-WAALCQTVYN 218
C + CW F F + + N K++ ++V I W A+ T+YN
Sbjct: 255 CTFAICWLPFHIFFLLPYINPDLYLKKFIQQVYLAIMWLAMSSTMYN 301
>AY462098-1|AAR23925.1| 407|Homo sapiens tachykinin receptor 1
protein.
Length = 407
Score = 30.7 bits (66), Expect = 6.6
Identities = 14/47 (29%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
Frame = +3
Query: 81 CAYTQCWYAFPFFSTINFCNLGNTCKEYCRKVPF*I-WAALCQTVYN 218
C + CW F F + + N K++ ++V I W A+ T+YN
Sbjct: 255 CTFAICWLPFHIFFLLPYINPDLYLKKFIQQVYLAIMWLAMSSTMYN 301
>AC007400-2|AAY15031.1| 212|Homo sapiens unknown protein.
Length = 212
Score = 30.7 bits (66), Expect = 6.6
Identities = 14/47 (29%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
Frame = +3
Query: 81 CAYTQCWYAFPFFSTINFCNLGNTCKEYCRKVPF*I-WAALCQTVYN 218
C + CW F F + + N K++ ++V I W A+ T+YN
Sbjct: 60 CTFAICWLPFHIFFLLPYINPDLYLKKFIQQVYLAIMWLAMSSTMYN 106
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 109,395,533
Number of Sequences: 237096
Number of extensions: 2110757
Number of successful extensions: 7960
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 7853
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7957
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10147868276
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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