Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120347.Seq
         (677 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U52100-1|AAC51779.1|  167|Homo sapiens XMP protein.                    32   1.6  
BC009687-1|AAH09687.1|  167|Homo sapiens epithelial membrane pro...    32   1.6  
AY057060-1|AAL27085.1|  167|Homo sapiens epithelial membrane pro...    32   1.6  
X94770-1|CAA64393.1|  167|Homo sapiens epithelial membrane prote...    31   2.8  

>U52100-1|AAC51779.1|  167|Homo sapiens XMP protein.
          Length = 167

 Score = 32.3 bits (70), Expect = 1.6
 Identities = 23/83 (27%), Positives = 37/83 (44%)
 Frame = +2

Query: 278 YIFMSCIQSNNEIGLTLSCLKFIYSISVFSIEFALKLAR*KARCIYVETSFIRLTECVCF 457
           Y  +  +Q+   +   L C+ F          F L+L R K    +V TS I+L  C+C 
Sbjct: 58  YSTLQAVQATMILSTILCCIAFFI--------FVLQLFRLKQGERFVLTSIIQLMSCLCV 109

Query: 458 EN*MSLFVVQREEIGRQRVKIRP 526
               S++  +RE+I  +  K  P
Sbjct: 110 MIAASIYTDRREDIHDKNAKFYP 132


>BC009687-1|AAH09687.1|  167|Homo sapiens epithelial membrane
           protein 2 protein.
          Length = 167

 Score = 32.3 bits (70), Expect = 1.6
 Identities = 23/83 (27%), Positives = 37/83 (44%)
 Frame = +2

Query: 278 YIFMSCIQSNNEIGLTLSCLKFIYSISVFSIEFALKLAR*KARCIYVETSFIRLTECVCF 457
           Y  +  +Q+   +   L C+ F          F L+L R K    +V TS I+L  C+C 
Sbjct: 58  YSTLQAVQATMILSTILCCIAFFI--------FVLQLFRLKQGERFVLTSIIQLMSCLCV 109

Query: 458 EN*MSLFVVQREEIGRQRVKIRP 526
               S++  +RE+I  +  K  P
Sbjct: 110 MIAASIYTDRREDIHDKNAKFYP 132


>AY057060-1|AAL27085.1|  167|Homo sapiens epithelial membrane
           protein 2 protein.
          Length = 167

 Score = 32.3 bits (70), Expect = 1.6
 Identities = 23/83 (27%), Positives = 37/83 (44%)
 Frame = +2

Query: 278 YIFMSCIQSNNEIGLTLSCLKFIYSISVFSIEFALKLAR*KARCIYVETSFIRLTECVCF 457
           Y  +  +Q+   +   L C+ F          F L+L R K    +V TS I+L  C+C 
Sbjct: 58  YSTLQAVQATMILSTILCCIAFFI--------FVLQLFRLKQGERFVLTSIIQLMSCLCV 109

Query: 458 EN*MSLFVVQREEIGRQRVKIRP 526
               S++  +RE+I  +  K  P
Sbjct: 110 MIAASIYTDRREDIHDKNAKFYP 132


>X94770-1|CAA64393.1|  167|Homo sapiens epithelial membrane protein
           protein.
          Length = 167

 Score = 31.5 bits (68), Expect = 2.8
 Identities = 18/51 (35%), Positives = 27/51 (52%)
 Frame = +2

Query: 374 FALKLAR*KARCIYVETSFIRLTECVCFEN*MSLFVVQREEIGRQRVKIRP 526
           F L+L R K    +V TS I+L  C+C     S++  +RE+I  +  K  P
Sbjct: 82  FVLQLFRLKQGERFVLTSIIQLMSCLCVMIAASIYTDRREDIHDKNAKFYP 132


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 84,451,058
Number of Sequences: 237096
Number of extensions: 1648569
Number of successful extensions: 6251
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 6219
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6251
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7671262118
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)