Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV120346.Seq
(786 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P60620 Cluster: Cytochrome c oxidase subunit 1; n=2931;... 132 1e-29
UniRef50_Q9MIY8 Cluster: Cytochrome c oxidase subunit 1; n=861; ... 129 9e-29
UniRef50_Q0H8Y3 Cluster: Probable intron-encoded endonuclease aI... 128 1e-28
UniRef50_Q5GGF4 Cluster: Cytochrome c oxidase subunit I; n=2742;... 128 2e-28
UniRef50_P00395 Cluster: Cytochrome c oxidase subunit 1; n=44498... 127 3e-28
UniRef50_Q9MCX7 Cluster: Cytochrome c oxidase subunit I; n=181; ... 127 4e-28
UniRef50_Q6ZLV6 Cluster: Cytochrome c oxidase subunit I; n=941; ... 126 5e-28
UniRef50_P48866 Cluster: Cytochrome c oxidase subunit 1; n=179; ... 124 3e-27
UniRef50_Q9G8S1 Cluster: Cytochrome c oxidase subunit 1; n=1; Na... 117 3e-25
UniRef50_Q28SZ5 Cluster: Cytochrome-c oxidase; n=50; cellular or... 115 1e-24
UniRef50_Q9ZZX1 Cluster: Intron-encoded DNA endonuclease aI5 alp... 115 2e-24
UniRef50_Q7YEU6 Cluster: Endonuclease; n=4; Fungi/Metazoa group|... 114 3e-24
UniRef50_Q1NET5 Cluster: Cytochrome-c oxidase; n=3; Alphaproteob... 113 6e-24
UniRef50_Q30DC3 Cluster: Cytochrome c oxidase subunit I; n=30; P... 112 1e-23
UniRef50_A7UG06 Cluster: Cytochrome oxidase subunits 1 and 2 pol... 111 2e-23
UniRef50_Q1XA94 Cluster: Cytochrome c oxidase subunit I; n=825; ... 109 6e-23
UniRef50_Q4FH11 Cluster: Cytochrome c oxidase subunit I; n=26; B... 108 2e-22
UniRef50_Q6ED53 Cluster: Cox1-i5 protein; n=2; Candida stellata|... 100 5e-20
UniRef50_Q6ED52 Cluster: Cox1-i4 protein; n=1; Candida stellata|... 100 5e-20
UniRef50_Q9B8X8 Cluster: Cytochrome c oxidase subunit I; n=517; ... 99 6e-20
UniRef50_Q8SHP5 Cluster: Cytochrome c oxidase subunit I; n=15; F... 99 6e-20
UniRef50_Q5W914 Cluster: Cytochrome c oxidase subunit I; n=9; Co... 95 1e-18
UniRef50_P14544 Cluster: Cytochrome c oxidase subunit 1; n=7; Eu... 94 3e-18
UniRef50_Q02766 Cluster: Cytochrome c oxidase subunit 1; n=107; ... 93 7e-18
UniRef50_O47573 Cluster: Cytochrome c oxidase subunit I; n=42; N... 93 9e-18
UniRef50_Q85HI4 Cluster: Cytochrome c oxidase subunit I; n=7; Ec... 91 2e-17
UniRef50_Q9MLW1 Cluster: Cytochrome c oxidase subunit I; n=5; Na... 90 5e-17
UniRef50_A6BM65 Cluster: Cytochrome oxidase subunit I; n=1; Peri... 86 8e-16
UniRef50_Q36097 Cluster: Cytochrome c oxidase subunit 1; n=3; Th... 84 4e-15
UniRef50_Q9XKD7 Cluster: Cytochrome c oxidase subunit I; n=1; Di... 83 1e-14
UniRef50_A2T435 Cluster: Cytochrome c oxidase subunit I; n=126; ... 83 1e-14
UniRef50_Q98P35 Cluster: Cytochrome C oxidase subunit I; n=16; c... 82 2e-14
UniRef50_Q0H8Y1 Cluster: Probable intron-encoded endonuclease aI... 82 2e-14
UniRef50_A6C5X9 Cluster: Cytochrome caa3 oxidase; n=3; Bacteria|... 81 2e-14
UniRef50_Q06473 Cluster: Cytochrome c oxidase subunit 1 (EC 1.9.... 81 2e-14
UniRef50_Q6XYE8 Cluster: Cytochrome c oxidase subunit I; n=2; En... 81 3e-14
UniRef50_P33518 Cluster: Cytochrome c oxidase polypeptide 1; n=4... 79 2e-13
UniRef50_Q58PB7 Cluster: Cytochrome c oxidase subunit I; n=106; ... 78 2e-13
UniRef50_A5UVJ0 Cluster: Cytochrome-c oxidase; n=2; Roseiflexus|... 77 4e-13
UniRef50_P03878 Cluster: Intron-encoded DNA endonuclease aI4 pre... 77 4e-13
UniRef50_Q18JR5 Cluster: Cytochrome-c-like terminal oxidase, sub... 76 9e-13
UniRef50_O67935 Cluster: Cytochrome c oxidase subunit I; n=1; Aq... 76 1e-12
UniRef50_Q1CZF1 Cluster: Cytochrome c oxidase, subunit I; n=1; M... 75 2e-12
UniRef50_A7HEB5 Cluster: Cytochrome-c oxidase; n=2; Cystobacteri... 75 2e-12
UniRef50_Q34463 Cluster: Cytochrome oxidase subunit I; n=3; Eugl... 75 3e-12
UniRef50_Q0I8U1 Cluster: Cytochrome c oxidase subunit I; n=16; B... 74 4e-12
UniRef50_P11947 Cluster: Cytochrome c oxidase subunit 1; n=48; O... 74 4e-12
UniRef50_Q8M352 Cluster: I-SceII DNA endonuclease-like protein; ... 74 5e-12
UniRef50_Q8SK39 Cluster: Cytochrome c oxidase subunit I; n=455; ... 73 8e-12
UniRef50_Q8ZXD1 Cluster: Cytochrome C oxidase subunit I /III; n=... 73 1e-11
UniRef50_P24010 Cluster: Cytochrome c oxidase subunit 1 (EC 1.9.... 72 1e-11
UniRef50_Q0H8Y0 Cluster: Probable intron-encoded endonuclease aI... 72 2e-11
UniRef50_P39481 Cluster: Quinol oxidase subunit 1/3; n=5; Sulfol... 71 3e-11
UniRef50_Q67ML1 Cluster: Cytochrome C oxidase subunit I; n=17; B... 71 3e-11
UniRef50_Q6ED51 Cluster: Cox-i3 protein; n=1; Candida stellata|R... 71 3e-11
UniRef50_P98000 Cluster: Alternative cytochrome c oxidase subuni... 71 3e-11
UniRef50_Q1H1C1 Cluster: Cytochrome-c oxidase; n=1; Methylobacil... 71 4e-11
UniRef50_Q9B6E6 Cluster: COX1-i5 protein; n=3; Fungi/Metazoa gro... 69 1e-10
UniRef50_Q79VD7 Cluster: Cytochrome c oxidase subunit 1; n=93; A... 69 2e-10
UniRef50_Q9YDX6 Cluster: Heme-copper oxidase subunit I+III; n=1;... 69 2e-10
UniRef50_A7H8L4 Cluster: Cytochrome c oxidase subunit I type; n=... 68 2e-10
UniRef50_Q11EK8 Cluster: Cytochrome c oxidase, subunit I; n=5; P... 68 3e-10
UniRef50_A1ZL77 Cluster: Alternative Cytochrome c oxidase polype... 67 5e-10
UniRef50_Q3L2S5 Cluster: Cytochrome c oxidase subunit I; n=1; Ae... 67 5e-10
UniRef50_A0RZ19 Cluster: Heme/copper-type cytochrome/quinol oxid... 66 7e-10
UniRef50_Q951H1 Cluster: Cytochrome c oxidase subunit I; n=388; ... 66 9e-10
UniRef50_Q7NQZ0 Cluster: Cytochrome o ubiquinol oxidase, subunit... 66 9e-10
UniRef50_A3ZTG1 Cluster: Cytochrome c oxidase subunit I; n=1; Bl... 66 9e-10
UniRef50_P98005 Cluster: Cytochrome c oxidase polypeptide I+III ... 66 1e-09
UniRef50_A0TRU9 Cluster: Cytochrome-c oxidase; n=30; Proteobacte... 65 2e-09
UniRef50_Q5P1W4 Cluster: Cytochrome c oxidase, subunit I; n=13; ... 65 2e-09
UniRef50_Q1IUK7 Cluster: Cytochrome-c oxidase; n=2; Acidobacteri... 65 2e-09
UniRef50_A0VUI8 Cluster: Cytochrome-c oxidase; n=1; Dinoroseobac... 64 5e-09
UniRef50_Q6ED50 Cluster: Cox-i2 protein; n=1; Candida stellata|R... 64 5e-09
UniRef50_P34956 Cluster: Quinol oxidase subunit 1 (EC 1.10.3.-) ... 63 7e-09
UniRef50_Q9WWR2 Cluster: Ubiquinol oxidase subunit 1 (EC 1.10.3.... 63 7e-09
UniRef50_A3SJL2 Cluster: QoxA, Quinol oxidase subunit I; n=2; Rh... 62 2e-08
UniRef50_A7BSH8 Cluster: Cytochrome c oxidase aa3, subunit 1; n=... 61 3e-08
UniRef50_A4WT83 Cluster: Cytochrome c, monohaem; n=3; Rhodobacte... 61 3e-08
UniRef50_Q59IQ0 Cluster: Cytochrome c oxidase subunit I; n=1; Wa... 61 3e-08
UniRef50_A5FXH8 Cluster: Cytochrome-c oxidase; n=1; Acidiphilium... 60 6e-08
UniRef50_A1XI88 Cluster: Cytochrome c oxidase subunit I; n=1; My... 59 1e-07
UniRef50_Q9Z605 Cluster: Quinol oxidase subunit I; n=15; Proteob... 59 1e-07
UniRef50_Q05FH1 Cluster: Cytochrome O ubiquinol oxidase subunit ... 59 1e-07
UniRef50_Q0AI64 Cluster: Cytochrome-c oxidase; n=3; Proteobacter... 58 2e-07
UniRef50_O99652 Cluster: Cytochrome c oxidase subunit I; n=1; Te... 56 1e-06
UniRef50_P29649 Cluster: Cytochrome c oxidase subunit 1; n=441; ... 56 1e-06
UniRef50_Q35061 Cluster: CoxI intron4 ORF; n=3; Marchantia polym... 55 2e-06
UniRef50_Q9RR77 Cluster: Cytochrome c oxidase, subunit I; n=2; D... 55 2e-06
UniRef50_A6C0L1 Cluster: Cytochrome c oxidase subunit I; n=1; Pl... 55 2e-06
UniRef50_Q6KZG3 Cluster: Cytochrome c oxidase polypeptide I/III;... 55 2e-06
UniRef50_Q0H8X8 Cluster: Probable intron-encoded endonuclease aI... 54 5e-06
UniRef50_Q8HCX2 Cluster: Cytochrome c oxidase subunit I; n=1; Ap... 53 9e-06
UniRef50_Q5V018 Cluster: Cytochrome c oxidase subunit I; n=3; Ha... 52 2e-05
UniRef50_Q6TP93 Cluster: Cytochrome c oxidase subunit I; n=2; Br... 49 1e-04
UniRef50_Q6RJT8 Cluster: Cytochrome c oxidase subunit 2; n=1; Ha... 49 1e-04
UniRef50_Q7YI87 Cluster: Cytochrome oxidase subunit I; n=1; Cela... 48 3e-04
UniRef50_A6XEV4 Cluster: Cytochrome c oxidase subunit 1; n=1; Mu... 48 4e-04
UniRef50_Q9TCV5 Cluster: Cytochrome c oxidase subunit I; n=6; Di... 46 0.001
UniRef50_Q9B6E4 Cluster: COX1-i3 protein; n=2; Yarrowia lipolyti... 44 0.004
UniRef50_Q94WV3 Cluster: Cytochrome oxidase subunit I; n=1; Pach... 39 0.12
UniRef50_O86945 Cluster: Sub-unit I of an aa3-type cytochrome ox... 37 0.66
UniRef50_A5URU0 Cluster: Cytochrome c oxidase, subunit I; n=4; C... 36 1.5
UniRef50_Q9B9T9 Cluster: Cytochrome oxidase subunit 1; n=7; Locu... 36 1.5
UniRef50_Q2Y5N3 Cluster: Integral membrane proteins containing u... 35 2.7
UniRef50_O67937 Cluster: Cytochrome c oxidase subunit I; n=1; Aq... 35 2.7
UniRef50_Q2ABI9 Cluster: NADH-ubiquinone oxidoreductase chain 2;... 34 3.5
UniRef50_Q35062 Cluster: CoxI intron2 ORF; n=2; Marchantia polym... 34 4.6
UniRef50_P98004 Cluster: Quinol oxidase subunit 1 (EC 1.10.3.-) ... 34 4.6
>UniRef50_P60620 Cluster: Cytochrome c oxidase subunit 1; n=2931;
cellular organisms|Rep: Cytochrome c oxidase subunit 1 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 527
Score = 132 bits (319), Expect = 1e-29
Identities = 63/85 (74%), Positives = 69/85 (81%)
Frame = +3
Query: 510 QLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFG 689
+LPLFV +V +TAF AGAIT+LLTDRN NT+FFDPAGGGDPILYQHLF FFG
Sbjct: 183 RLPLFVWSVLVTAFLLLLSLPVLAGAITMLLTDRNFNTTFFDPAGGGDPILYQHLFWFFG 242
Query: 690 HPEVYILILPGFGIISHIISQERGK 764
HPEVYILILPGFGIISHI+S GK
Sbjct: 243 HPEVYILILPGFGIISHIVSTFSGK 267
Score = 69.3 bits (162), Expect = 1e-10
Identities = 34/63 (53%), Positives = 41/63 (65%)
Frame = +1
Query: 256 PRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 435
PR+NNI F +VE G+GTG TVYPPLS +H G +VDLAIFSLHL+G
Sbjct: 98 PRLNNISFWLLPPSLLLLLSSALVEVGSGTGWTVYPPLSGITSHSGGAVDLAIFSLHLSG 157
Query: 436 ISS 444
+SS
Sbjct: 158 VSS 160
Score = 56.0 bits (129), Expect = 1e-06
Identities = 31/86 (36%), Positives = 39/86 (45%), Gaps = 2/86 (2%)
Frame = +2
Query: 2 TNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLI--GDDQIYNTIVTAHAXXXXX 175
TNHKDIGTLY EL PG I G+ Q+YN ++TAHA
Sbjct: 11 TNHKDIGTLYFIFGAIAGVMGTCFSVLIRMELARPGDQILGGNHQLYNVLITAHAFLMIF 70
Query: 176 XXXXXXXXXXXXN*LVPLILGAPDIA 253
N VP+++GAPD+A
Sbjct: 71 FMVMPAMIGGFGNWFVPILIGAPDMA 96
>UniRef50_Q9MIY8 Cluster: Cytochrome c oxidase subunit 1; n=861;
root|Rep: Cytochrome c oxidase subunit 1 - Danio rerio
(Zebrafish) (Brachydanio rerio)
Length = 516
Score = 129 bits (311), Expect = 9e-29
Identities = 61/87 (70%), Positives = 68/87 (78%)
Frame = +3
Query: 510 QLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFG 689
Q PLFV AV +TA A IT+LLTDRNLNT+FFDPAGGGDPILYQHLF FFG
Sbjct: 180 QTPLFVWAVLVTAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFG 239
Query: 690 HPEVYILILPGFGIISHIISQERGKKK 770
HPEVYILILPGFGIISH+++ GKK+
Sbjct: 240 HPEVYILILPGFGIISHVVAYYAGKKE 266
Score = 74.1 bits (174), Expect = 4e-12
Identities = 39/84 (46%), Positives = 44/84 (52%)
Frame = +2
Query: 2 TNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXX 181
TNHKDIGTLY AEL PG+L+GDDQIYN IVTAHA
Sbjct: 10 TNHKDIGTLYLVFGAWAGMVGTALSLLIRAELSQPGALLGDDQIYNVIVTAHAFVMIFFM 69
Query: 182 XXXXXXXXXXN*LVPLILGAPDIA 253
N LVPL++GAPD+A
Sbjct: 70 VMPILIGGFGNWLVPLMIGAPDMA 93
Score = 72.9 bits (171), Expect = 8e-12
Identities = 36/63 (57%), Positives = 41/63 (65%)
Frame = +1
Query: 256 PRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 435
PR+NN+ F VE GAGTG TVYPPL+ N+AH G SVDL IFSLHLAG
Sbjct: 95 PRMNNMSFWLLPPSFLLLLASSGVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAG 154
Query: 436 ISS 444
+SS
Sbjct: 155 VSS 157
>UniRef50_Q0H8Y3 Cluster: Probable intron-encoded endonuclease aI8
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI8 (EC
3.1.-.-)]; n=103; Eukaryota|Rep: Probable intron-encoded
endonuclease aI8 precursor [Contains: Truncated
non-functional cytochrome oxidase 1; Intron-encoded
endonuclease aI8 (EC 3.1.-.-)] - Ustilago maydis (Smut
fungus)
Length = 645
Score = 128 bits (310), Expect = 1e-28
Identities = 59/85 (69%), Positives = 68/85 (80%)
Frame = +3
Query: 510 QLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFG 689
+LPLFV A+ +TA AGAIT+LLTDRN NTSF+DPAGGGDPILYQHLF FFG
Sbjct: 180 KLPLFVWAIFVTAILLLLSLPVLAGAITMLLTDRNFNTSFYDPAGGGDPILYQHLFWFFG 239
Query: 690 HPEVYILILPGFGIISHIISQERGK 764
HPEVYILI+PGFG++SHI+S GK
Sbjct: 240 HPEVYILIIPGFGMVSHIVSAFSGK 264
Score = 71.7 bits (168), Expect = 2e-11
Identities = 37/63 (58%), Positives = 40/63 (63%)
Frame = +1
Query: 256 PRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 435
PR+NNI F VE GAGTG TVYPPLS +H G SVDLAIFSLHL+G
Sbjct: 95 PRLNNISFWLLPPSLILLLASAFVEQGAGTGWTVYPPLSGLQSHSGGSVDLAIFSLHLSG 154
Query: 436 ISS 444
ISS
Sbjct: 155 ISS 157
Score = 53.6 bits (123), Expect = 5e-06
Identities = 33/86 (38%), Positives = 39/86 (45%), Gaps = 2/86 (2%)
Frame = +2
Query: 2 TNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXXXXX 175
TN KDIGTLY EL PG L GD Q+YN I+TAHA
Sbjct: 8 TNAKDIGTLYLIFAVFAAMIGTAFSVLIRMELAAPGVQYLNGDHQLYNVIITAHAFVMIF 67
Query: 176 XXXXXXXXXXXXN*LVPLILGAPDIA 253
N LVP+++GAPD+A
Sbjct: 68 FMVMPAMVGGFGNYLVPVMIGAPDMA 93
>UniRef50_Q5GGF4 Cluster: Cytochrome c oxidase subunit I; n=2742;
Bilateria|Rep: Cytochrome c oxidase subunit I - Cotesia
melitaearum (Parasitoid wasp)
Length = 499
Score = 128 bits (308), Expect = 2e-28
Identities = 61/87 (70%), Positives = 69/87 (79%)
Frame = +3
Query: 510 QLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFG 689
++ LF +V ITA AGAIT+LLTDRN+NTSFFDP+GGGDPILYQHLF FFG
Sbjct: 164 KMSLFSWSVFITAILLLLSLPVLAGAITMLLTDRNMNTSFFDPSGGGDPILYQHLFWFFG 223
Query: 690 HPEVYILILPGFGIISHIISQERGKKK 770
HPEVYILILPGFGIISH+I E GKK+
Sbjct: 224 HPEVYILILPGFGIISHMIFNESGKKE 250
Score = 63.3 bits (147), Expect = 7e-09
Identities = 32/63 (50%), Positives = 36/63 (57%)
Frame = +1
Query: 256 PRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 435
PR+NN+ F + G GTG TVYPPLS + H G SVDL IFSLHLAG
Sbjct: 79 PRMNNMSFWLLIPSLLLLILSMFINVGVGTGWTVYPPLSLILGHGGMSVDLGIFSLHLAG 138
Query: 436 ISS 444
SS
Sbjct: 139 ASS 141
Score = 56.4 bits (130), Expect = 8e-07
Identities = 27/54 (50%), Positives = 35/54 (64%)
Frame = +2
Query: 92 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIA 253
ELG PGSLIG+DQIYN+IVT+HA N L+PL+LG+PD++
Sbjct: 24 ELGMPGSLIGNDQIYNSIVTSHAFIMIFFMVMPVMIGGFGNWLIPLMLGSPDMS 77
>UniRef50_P00395 Cluster: Cytochrome c oxidase subunit 1; n=44498;
root|Rep: Cytochrome c oxidase subunit 1 - Homo sapiens
(Human)
Length = 513
Score = 127 bits (307), Expect = 3e-28
Identities = 61/87 (70%), Positives = 68/87 (78%)
Frame = +3
Query: 510 QLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFG 689
Q PLFV +V ITA A IT+LLTDRNLNT+FFDPAGGGDPILYQHLF FFG
Sbjct: 180 QTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFG 239
Query: 690 HPEVYILILPGFGIISHIISQERGKKK 770
HPEVYILILPGFG+ISHI++ GKK+
Sbjct: 240 HPEVYILILPGFGMISHIVTYYSGKKE 266
Score = 72.5 bits (170), Expect = 1e-11
Identities = 38/84 (45%), Positives = 44/84 (52%)
Frame = +2
Query: 2 TNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXX 181
TNHKDIGTLY AELG PG+L+G+D IYN IVTAHA
Sbjct: 10 TNHKDIGTLYLLFGAWAGVLGTALSLLIRAELGQPGNLLGNDHIYNVIVTAHAFVMIFFM 69
Query: 182 XXXXXXXXXXN*LVPLILGAPDIA 253
N LVPL++GAPD+A
Sbjct: 70 VMPIMIGGFGNWLVPLMIGAPDMA 93
Score = 72.1 bits (169), Expect = 1e-11
Identities = 35/63 (55%), Positives = 41/63 (65%)
Frame = +1
Query: 256 PRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 435
PR+NN+ F +VE GAGTG TVYPPL+ N +H G SVDL IFSLHLAG
Sbjct: 95 PRMNNMSFWLLPPSLLLLLASAMVEAGAGTGWTVYPPLAGNYSHPGASVDLTIFSLHLAG 154
Query: 436 ISS 444
+SS
Sbjct: 155 VSS 157
>UniRef50_Q9MCX7 Cluster: Cytochrome c oxidase subunit I; n=181;
Coelomata|Rep: Cytochrome c oxidase subunit I - Piculus
rubiginosus
Length = 504
Score = 127 bits (306), Expect = 4e-28
Identities = 60/87 (68%), Positives = 68/87 (78%)
Frame = +3
Query: 510 QLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFG 689
Q PLFV +V ITA A IT+LLTDRNLNT+FFDPAGGGDPILYQHLF FFG
Sbjct: 181 QTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFG 240
Query: 690 HPEVYILILPGFGIISHIISQERGKKK 770
HPEVYILILPGFG+ISH+++ GKK+
Sbjct: 241 HPEVYILILPGFGMISHVVTYYAGKKE 267
Score = 76.6 bits (180), Expect = 7e-13
Identities = 40/84 (47%), Positives = 45/84 (53%)
Frame = +2
Query: 2 TNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXX 181
TNHKDIGTLY AELG PG+L+GDDQIYN IVTAHA
Sbjct: 11 TNHKDIGTLYLIFGAWAGMIGTALSLLIRAELGQPGTLLGDDQIYNVIVTAHAFVMIFFM 70
Query: 182 XXXXXXXXXXN*LVPLILGAPDIA 253
N LVPL++GAPD+A
Sbjct: 71 VMPIMIGGFGNWLVPLMIGAPDMA 94
Score = 76.2 bits (179), Expect = 9e-13
Identities = 39/63 (61%), Positives = 43/63 (68%)
Frame = +1
Query: 256 PRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 435
PR+NN+ F VE GAGTG TVYPPL+ N+AH G SVDLAIFSLHLAG
Sbjct: 96 PRMNNMSFWLXPPSFLLLLASSTVEAGAGTGWTVYPPLAGNLAHAGASVDLAIFSLHLAG 155
Query: 436 ISS 444
ISS
Sbjct: 156 ISS 158
>UniRef50_Q6ZLV6 Cluster: Cytochrome c oxidase subunit I; n=941;
Eukaryota|Rep: Cytochrome c oxidase subunit I -
Ophisurus macrorhynchos
Length = 546
Score = 126 bits (305), Expect = 5e-28
Identities = 59/87 (67%), Positives = 68/87 (78%)
Frame = +3
Query: 510 QLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFG 689
Q PLFV +V +TA A IT+LLTDRNLNT+FFDPAGGGDPILYQHLF FFG
Sbjct: 180 QTPLFVWSVLVTAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFG 239
Query: 690 HPEVYILILPGFGIISHIISQERGKKK 770
HPEVYILILPGFG+ISH+++ GKK+
Sbjct: 240 HPEVYILILPGFGMISHVVTYYAGKKE 266
Score = 74.1 bits (174), Expect = 4e-12
Identities = 39/84 (46%), Positives = 44/84 (52%)
Frame = +2
Query: 2 TNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXX 181
TNHKDIGTLY AEL PG+L+GDDQIYN IVTAHA
Sbjct: 10 TNHKDIGTLYLVFGAWAGMVGTALSLLIRAELSQPGALLGDDQIYNVIVTAHAFVMIFFM 69
Query: 182 XXXXXXXXXXN*LVPLILGAPDIA 253
N LVPL++GAPD+A
Sbjct: 70 VMPVMIGGFGNWLVPLMIGAPDMA 93
Score = 72.9 bits (171), Expect = 8e-12
Identities = 36/63 (57%), Positives = 41/63 (65%)
Frame = +1
Query: 256 PRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 435
PR+NN+ F VE GAGTG TVYPPL+ N+AH G SVDL IFSLHLAG
Sbjct: 95 PRMNNMSFWLLPPSFLLLLASSGVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAG 154
Query: 436 ISS 444
+SS
Sbjct: 155 VSS 157
>UniRef50_P48866 Cluster: Cytochrome c oxidase subunit 1; n=179;
cellular organisms|Rep: Cytochrome c oxidase subunit 1 -
Chondrus crispus (Carragheen)
Length = 532
Score = 124 bits (299), Expect = 3e-27
Identities = 57/80 (71%), Positives = 66/80 (82%)
Frame = +3
Query: 510 QLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFG 689
++PLFV ++ +TAF AGAIT+LLTDRN NTSFFD +GGGDPILYQHLF FFG
Sbjct: 188 RIPLFVWSILVTAFLLLLAVPVLAGAITMLLTDRNFNTSFFDASGGGDPILYQHLFWFFG 247
Query: 690 HPEVYILILPGFGIISHIIS 749
HPEVYILILPGFG+ISHI+S
Sbjct: 248 HPEVYILILPGFGMISHIVS 267
Score = 67.3 bits (157), Expect = 4e-10
Identities = 34/63 (53%), Positives = 40/63 (63%)
Frame = +1
Query: 256 PRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 435
PR+NNI F +VE G GTG TVYPPLSS +H G +VDLAIFSLH++G
Sbjct: 103 PRLNNISFWLLPPSLCLLLMSALVEVGVGTGWTVYPPLSSIQSHSGGAVDLAIFSLHISG 162
Query: 436 ISS 444
SS
Sbjct: 163 ASS 165
Score = 56.4 bits (130), Expect = 8e-07
Identities = 31/86 (36%), Positives = 41/86 (47%), Gaps = 2/86 (2%)
Frame = +2
Query: 2 TNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXXXXX 175
TNHKDIGTLY EL P + L+G+ QIYN ++TAHA
Sbjct: 16 TNHKDIGTLYLIFGAFSGVLGGCMSMLIRMELAQPSNHLLLGNHQIYNVLITAHAFLMIF 75
Query: 176 XXXXXXXXXXXXN*LVPLILGAPDIA 253
N LVP+++G+PD+A
Sbjct: 76 FMVMPVMIGGFGNWLVPIMIGSPDMA 101
>UniRef50_Q9G8S1 Cluster: Cytochrome c oxidase subunit 1; n=1;
Naegleria gruberi|Rep: Cytochrome c oxidase subunit 1 -
Naegleria gruberi
Length = 633
Score = 117 bits (282), Expect = 3e-25
Identities = 53/79 (67%), Positives = 62/79 (78%)
Frame = +3
Query: 513 LPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGH 692
LPLFV +V +T+F A AIT+LL DRN NTSF+DP GGGD +LYQHLF FFGH
Sbjct: 185 LPLFVWSVAVTSFLVIVAIPVLAAAITLLLFDRNFNTSFYDPVGGGDVVLYQHLFWFFGH 244
Query: 693 PEVYILILPGFGIISHIIS 749
PEVYILILPGFG++SHII+
Sbjct: 245 PEVYILILPGFGLVSHIIA 263
Score = 61.7 bits (143), Expect = 2e-08
Identities = 32/63 (50%), Positives = 34/63 (53%)
Frame = +1
Query: 256 PRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 435
PR+NN F E G GTG TVYPPLSS +H G SVDL IFS HL G
Sbjct: 99 PRLNNFSFWLLPGAILLAVLATYSEGGPGTGWTVYPPLSSLQSHSGASVDLMIFSFHLVG 158
Query: 436 ISS 444
I S
Sbjct: 159 IGS 161
Score = 41.5 bits (93), Expect = 0.023
Identities = 26/86 (30%), Positives = 32/86 (37%), Gaps = 2/86 (2%)
Frame = +2
Query: 2 TNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXXXXX 175
TNHK IG LY EL PG L G+ YN I T H
Sbjct: 12 TNHKRIGILYLFFGVFNGFLAVLLSMLMRLELAFPGDQILFGEYHFYNMITTVHGVLMLF 71
Query: 176 XXXXXXXXXXXXN*LVPLILGAPDIA 253
N VP+++GAPD++
Sbjct: 72 VVVMPILFGGFGNYFVPILIGAPDMS 97
>UniRef50_Q28SZ5 Cluster: Cytochrome-c oxidase; n=50; cellular
organisms|Rep: Cytochrome-c oxidase - Jannaschia sp.
(strain CCS1)
Length = 628
Score = 115 bits (277), Expect = 1e-24
Identities = 51/80 (63%), Positives = 64/80 (80%)
Frame = +3
Query: 510 QLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFG 689
++PLF +V +TA+ AGAIT+LLTDRN T+FFDPAGGGDPIL+QH+F FFG
Sbjct: 286 KVPLFAWSVFVTAWLLLLSLPVLAGAITMLLTDRNFGTTFFDPAGGGDPILFQHIFWFFG 345
Query: 690 HPEVYILILPGFGIISHIIS 749
HPEVYI+ILP FG+ISHI++
Sbjct: 346 HPEVYIVILPAFGVISHIVA 365
Score = 52.8 bits (121), Expect = 9e-06
Identities = 23/63 (36%), Positives = 36/63 (57%)
Frame = +1
Query: 256 PRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 435
PR+NN+ + +++ GAG G T YPP+S+ R+VD AIF++H++G
Sbjct: 201 PRLNNLSYWMYVAGTCLAFCSVMIDGGAGPGWTFYPPISAQGVETSRAVDFAIFAVHVSG 260
Query: 436 ISS 444
SS
Sbjct: 261 ASS 263
>UniRef50_Q9ZZX1 Cluster: Intron-encoded DNA endonuclease aI5 alpha
precursor (DNA endonuclease I-SceIV) [Contains:
Truncated non-functional cytochrome oxidase 1; DNA
endonuclease aI5 alpha (EC 3.1.-.-) (Intron-encoded
endonuclease I- SceIV)]; n=2; Saccharomycetales|Rep:
Intron-encoded DNA endonuclease aI5 alpha precursor (DNA
endonuclease I-SceIV) [Contains: Truncated
non-functional cytochrome oxidase 1; DNA endonuclease
aI5 alpha (EC 3.1.-.-) (Intron-encoded endonuclease I-
SceIV)] - Saccharomyces cerevisiae (Baker's yeast)
Length = 630
Score = 115 bits (276), Expect = 2e-24
Identities = 52/80 (65%), Positives = 63/80 (78%)
Frame = +3
Query: 510 QLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFG 689
+LPLFV ++ ITAF + IT+LL DRN NTSFF+ +GGGDPILY+HLF FFG
Sbjct: 181 KLPLFVWSIFITAFLLLLSLPVLSAGITMLLLDRNFNTSFFEVSGGGDPILYEHLFWFFG 240
Query: 690 HPEVYILILPGFGIISHIIS 749
HPEVYILI+PGFGIISH++S
Sbjct: 241 HPEVYILIIPGFGIISHVVS 260
Score = 72.5 bits (170), Expect = 1e-11
Identities = 38/63 (60%), Positives = 41/63 (65%)
Frame = +1
Query: 256 PRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 435
PRINNI F +VE+GAGTG TVYPPLSS AH G SVDLAIF+LHL
Sbjct: 96 PRINNIAFWVLPMGLVCLVTSTLVESGAGTGWTVYPPLSSIQAHSGPSVDLAIFALHLTS 155
Query: 436 ISS 444
ISS
Sbjct: 156 ISS 158
>UniRef50_Q7YEU6 Cluster: Endonuclease; n=4; Fungi/Metazoa
group|Rep: Endonuclease - Saccharomyces servazzii
(Yeast)
Length = 675
Score = 114 bits (274), Expect = 3e-24
Identities = 52/80 (65%), Positives = 61/80 (76%)
Frame = +3
Query: 510 QLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFG 689
++PLFV A+ ITAF + IT+LL DRN NTSFF+ AGGGDPI YQH F FFG
Sbjct: 181 KMPLFVWAIFITAFLLLLSLPVLSAGITMLLMDRNFNTSFFEVAGGGDPIFYQHAFWFFG 240
Query: 690 HPEVYILILPGFGIISHIIS 749
HPEVYILI+PGFGI+SHI+S
Sbjct: 241 HPEVYILIIPGFGIVSHIVS 260
Score = 71.3 bits (167), Expect = 3e-11
Identities = 38/63 (60%), Positives = 41/63 (65%)
Frame = +1
Query: 256 PRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 435
PRIN+I F +VE+GAGTG TVYPPLSS AH G SVDLAIFSLHL
Sbjct: 96 PRINSIGFWLLPMGLVCLVTSTLVESGAGTGWTVYPPLSSIQAHSGPSVDLAIFSLHLTS 155
Query: 436 ISS 444
ISS
Sbjct: 156 ISS 158
>UniRef50_Q1NET5 Cluster: Cytochrome-c oxidase; n=3;
Alphaproteobacteria|Rep: Cytochrome-c oxidase -
Sphingomonas sp. SKA58
Length = 556
Score = 113 bits (271), Expect = 6e-24
Identities = 53/80 (66%), Positives = 62/80 (77%)
Frame = +3
Query: 510 QLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFG 689
++PLFV +V +TAF A AIT+LLTDRN T+F+D AGGGDP LYQHLF FFG
Sbjct: 223 KMPLFVWSVLVTAFLLLLALPVLAAAITMLLTDRNFGTTFYDAAGGGDPELYQHLFWFFG 282
Query: 690 HPEVYILILPGFGIISHIIS 749
HPEVYI+ILPGFGIIS I+S
Sbjct: 283 HPEVYIMILPGFGIISQIVS 302
Score = 50.0 bits (114), Expect = 7e-05
Identities = 31/67 (46%), Positives = 37/67 (55%), Gaps = 4/67 (5%)
Frame = +1
Query: 256 PRINNIRFXXXXXXXXXXXXXXIVE----NGAGTG*TVYPPLSSNIAHRGRSVDLAIFSL 423
PR+NNI F V NGAGTG TVY PLS++ G +VD+AI SL
Sbjct: 135 PRMNNISFWLLIPAFALLLGSTFVPGGTGNGAGTGWTVYAPLSTS-GSAGPAVDMAILSL 193
Query: 424 HLAGISS 444
H+AG SS
Sbjct: 194 HIAGASS 200
>UniRef50_Q30DC3 Cluster: Cytochrome c oxidase subunit I; n=30;
Panarthropoda|Rep: Cytochrome c oxidase subunit I -
Pagyris cymothoe
Length = 487
Score = 112 bits (269), Expect = 1e-23
Identities = 53/68 (77%), Positives = 56/68 (82%)
Frame = +3
Query: 510 QLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFG 689
Q+PLF+ AVGITA AGAIT+LLTDRNLNTSFFDPAGGGDPILYQHLF FFG
Sbjct: 153 QMPLFIWAVGITALLLLLSLPVLAGAITMLLTDRNLNTSFFDPAGGGDPILYQHLFWFFG 212
Query: 690 HPEVYILI 713
HPEVYILI
Sbjct: 213 HPEVYILI 220
Score = 84.6 bits (200), Expect = 3e-15
Identities = 43/63 (68%), Positives = 45/63 (71%)
Frame = +1
Query: 256 PRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 435
PR+NN+ F IVENGAGTG TVYPPLSSNIAH G SVDLAIFSLHLAG
Sbjct: 68 PRMNNMSFWLLPPSLILLISSSIVENGAGTGWTVYPPLSSNIAHGGSSVDLAIFSLHLAG 127
Query: 436 ISS 444
ISS
Sbjct: 128 ISS 130
Score = 64.5 bits (150), Expect = 3e-09
Identities = 32/54 (59%), Positives = 35/54 (64%)
Frame = +2
Query: 92 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIA 253
ELG PGSLIGDDQIYNTIVTAHA N L+PL+LGAPD+A
Sbjct: 13 ELGTPGSLIGDDQIYNTIVTAHAFIMIFFMVMPIMIGGFGNWLIPLMLGAPDMA 66
>UniRef50_A7UG06 Cluster: Cytochrome oxidase subunits 1 and 2
polyprotein; n=1; Phaeosphaeria nodorum SN15|Rep:
Cytochrome oxidase subunits 1 and 2 polyprotein -
Phaeosphaeria nodorum SN15
Length = 789
Score = 111 bits (267), Expect = 2e-23
Identities = 56/85 (65%), Positives = 61/85 (71%)
Frame = +3
Query: 510 QLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFG 689
+L LF AV ITA AG IT++LTDRN NTSFF+ AGGGDPILYQHLF FFG
Sbjct: 181 KLILFAWAVVITAVLLLLSLPVLAGGITMVLTDRNFNTSFFEVAGGGDPILYQHLFWFFG 240
Query: 690 HPEVYILILPGFGIISHIISQERGK 764
HPEVYILI+PGFGIIS IS K
Sbjct: 241 HPEVYILIIPGFGIISTTISANSNK 265
Score = 66.5 bits (155), Expect = 7e-10
Identities = 33/63 (52%), Positives = 39/63 (61%)
Frame = +1
Query: 256 PRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 435
PR+NNI + +ENG GTG T+YPPLS +H G SVDLAIF LHL+G
Sbjct: 96 PRLNNISYLLLIPSIVLFLFAGGIENGVGTGWTLYPPLSGIQSHSGPSVDLAIFGLHLSG 155
Query: 436 ISS 444
ISS
Sbjct: 156 ISS 158
Score = 47.6 bits (108), Expect = 4e-04
Identities = 29/84 (34%), Positives = 36/84 (42%), Gaps = 1/84 (1%)
Frame = +2
Query: 2 TNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPG-SLIGDDQIYNTIVTAHAXXXXXX 178
+N KDIG LY EL PG I D+Q+YN+I+TAHA
Sbjct: 10 SNAKDIGVLYLIYALFAGLIGTAFSVLIRLELSGPGVQYIADNQLYNSIITAHAIIMIFF 69
Query: 179 XXXXXXXXXXXN*LVPLILGAPDI 250
N L+PL LG PD+
Sbjct: 70 MVMPALIGGFGNFLLPLGLGGPDM 93
>UniRef50_Q1XA94 Cluster: Cytochrome c oxidase subunit I; n=825;
Eukaryota|Rep: Cytochrome c oxidase subunit I -
Paracoccidioides brasiliensis
Length = 710
Score = 109 bits (263), Expect = 6e-23
Identities = 56/85 (65%), Positives = 62/85 (72%)
Frame = +3
Query: 510 QLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFG 689
+L LF AV ITA A AIT+LLTDRNLNTSF++ AGGGD ILYQHLF FFG
Sbjct: 207 KLALFGWAVVITAVLLLLSLPVLAAAITMLLTDRNLNTSFYELAGGGDAILYQHLFWFFG 266
Query: 690 HPEVYILILPGFGIISHIISQERGK 764
HPEVYILI+PGFGIIS +IS K
Sbjct: 267 HPEVYILIIPGFGIISTVISANSNK 291
Score = 64.1 bits (149), Expect = 4e-09
Identities = 30/63 (47%), Positives = 37/63 (58%)
Frame = +1
Query: 256 PRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 435
PR+NN+ + I+ENG GTG T+YPPLS +H VDL IF LHL+G
Sbjct: 122 PRLNNVSYWLLIPSLFLFVFAAIIENGVGTGWTLYPPLSGIQSHSSMGVDLGIFGLHLSG 181
Query: 436 ISS 444
ISS
Sbjct: 182 ISS 184
Score = 43.6 bits (98), Expect = 0.006
Identities = 25/85 (29%), Positives = 36/85 (42%), Gaps = 1/85 (1%)
Frame = +2
Query: 2 TNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPG-SLIGDDQIYNTIVTAHAXXXXXX 178
+N KDI LY EL PG I D+Q+YN+I+T+H
Sbjct: 36 SNAKDIAILYLIFALFSGLLGTAFSVLIRLELSGPGIQYIEDNQLYNSIITSHGVIMIFF 95
Query: 179 XXXXXXXXXXXN*LVPLILGAPDIA 253
N L+P+++G PD+A
Sbjct: 96 MVMPALIGGFGNFLLPILIGGPDMA 120
>UniRef50_Q4FH11 Cluster: Cytochrome c oxidase subunit I; n=26;
Bilateria|Rep: Cytochrome c oxidase subunit I - Samia
cynthia ricini (Indian eri silkmoth)
Length = 510
Score = 108 bits (259), Expect = 2e-22
Identities = 55/91 (60%), Positives = 62/91 (68%)
Frame = +3
Query: 510 QLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFG 689
Q+PLFV AVGITAF AGAIT+LLTDRNLNTSFFDPAGGGDPILYQHLF FFG
Sbjct: 177 QMPLFVWAVGITAFLLLLSLPVLAGAITMLLTDRNLNTSFFDPAGGGDPILYQHLFWFFG 236
Query: 690 HPEVYILILPGFGIISHIISQERGKKKLLVV 782
HP++ + ++ K KLLVV
Sbjct: 237 HPKLMFSFSQDLVSFHMLFPKKVEKSKLLVV 267
Score = 84.6 bits (200), Expect = 3e-15
Identities = 43/63 (68%), Positives = 45/63 (71%)
Frame = +1
Query: 256 PRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 435
PR+NN+ F IVENGAGTG TVYPPLSSNIAH G SVDLAIFSLHLAG
Sbjct: 92 PRMNNMSFWLLPPSLTLLISSSIVENGAGTGWTVYPPLSSNIAHGGSSVDLAIFSLHLAG 151
Query: 436 ISS 444
ISS
Sbjct: 152 ISS 154
Score = 81.4 bits (192), Expect = 2e-14
Identities = 44/84 (52%), Positives = 46/84 (54%)
Frame = +2
Query: 2 TNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXX 181
TNHKDIGTLY AELG PGSLIGDDQIYNTIVTAHA
Sbjct: 7 TNHKDIGTLYFIFGIWAGMVGTSLSLLIRAELGTPGSLIGDDQIYNTIVTAHAFIMIFFM 66
Query: 182 XXXXXXXXXXN*LVPLILGAPDIA 253
N LVPL+LGAPD+A
Sbjct: 67 VMPIMIGGFGNWLVPLMLGAPDMA 90
>UniRef50_Q6ED53 Cluster: Cox1-i5 protein; n=2; Candida
stellata|Rep: Cox1-i5 protein - Candida stellata (Yeast)
Length = 763
Score = 100 bits (239), Expect = 5e-20
Identities = 49/88 (55%), Positives = 62/88 (70%)
Frame = +3
Query: 510 QLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFG 689
+LPLFV +V ITA A +T+LL DRN NTSFF +GGGDP+LY+H+F FFG
Sbjct: 198 KLPLFVWSVLITAVLIILALPVLAAGLTMLLMDRNFNTSFFVVSGGGDPLLYEHIFWFFG 257
Query: 690 HPEVYILILPGFGIISHIISQERGKKKL 773
HPEVYILI+P FG++S I+ Q KK +
Sbjct: 258 HPEVYILIVPVFGVVSQIV-QVYAKKPI 284
Score = 63.7 bits (148), Expect = 5e-09
Identities = 28/63 (44%), Positives = 41/63 (65%)
Frame = +1
Query: 256 PRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 435
PRINN+ F +++ G G+G T+YPPL+S +H G S+D+AIF+LHL+G
Sbjct: 113 PRINNLAFVVLLPSMLFAVLSCLIDEGPGSGWTLYPPLTSLQSHSGSSIDMAIFALHLSG 172
Query: 436 ISS 444
+SS
Sbjct: 173 LSS 175
>UniRef50_Q6ED52 Cluster: Cox1-i4 protein; n=1; Candida
stellata|Rep: Cox1-i4 protein - Candida stellata (Yeast)
Length = 676
Score = 100 bits (239), Expect = 5e-20
Identities = 49/88 (55%), Positives = 62/88 (70%)
Frame = +3
Query: 510 QLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFG 689
+LPLFV +V ITA A +T+LL DRN NTSFF +GGGDP+LY+H+F FFG
Sbjct: 198 KLPLFVWSVLITAVLIILALPVLAAGLTMLLMDRNFNTSFFVVSGGGDPLLYEHIFWFFG 257
Query: 690 HPEVYILILPGFGIISHIISQERGKKKL 773
HPEVYILI+P FG++S I+ Q KK +
Sbjct: 258 HPEVYILIVPVFGVVSQIV-QVYAKKPI 284
Score = 63.7 bits (148), Expect = 5e-09
Identities = 28/63 (44%), Positives = 41/63 (65%)
Frame = +1
Query: 256 PRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 435
PRINN+ F +++ G G+G T+YPPL+S +H G S+D+AIF+LHL+G
Sbjct: 113 PRINNLAFVVLLPSMLFAVLSCLIDEGPGSGWTLYPPLTSLQSHSGSSIDMAIFALHLSG 172
Query: 436 ISS 444
+SS
Sbjct: 173 LSS 175
>UniRef50_Q9B8X8 Cluster: Cytochrome c oxidase subunit I; n=517;
Bilateria|Rep: Cytochrome c oxidase subunit I -
Schistosoma mansoni (Blood fluke)
Length = 609
Score = 99 bits (238), Expect = 6e-20
Identities = 42/55 (76%), Positives = 49/55 (89%)
Frame = +3
Query: 579 AGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHI 743
A IT+LL DRN T+FF+P+GGGDPIL+QHLF FFGHPEVY+LILPGFGI+SHI
Sbjct: 293 ASGITMLLFDRNFGTAFFEPSGGGDPILFQHLFWFFGHPEVYVLILPGFGIVSHI 347
Score = 39.1 bits (87), Expect = 0.12
Identities = 21/37 (56%), Positives = 24/37 (64%)
Frame = +1
Query: 334 GAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 444
G G G T+YPPLS G VD +FSLHLAG+SS
Sbjct: 217 GCGIGWTLYPPLSI-WEGSGFGVDYLMFSLHLAGVSS 252
>UniRef50_Q8SHP5 Cluster: Cytochrome c oxidase subunit I; n=15;
Fungi/Metazoa group|Rep: Cytochrome c oxidase subunit I
- Trichoderma reesei (Hypocrea jecorina)
Length = 635
Score = 99 bits (238), Expect = 6e-20
Identities = 45/59 (76%), Positives = 50/59 (84%)
Frame = +3
Query: 588 ITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGK 764
IT++LTDRN NTSFF+ AGGGDPIL+QHLF FFGHPEVYILI+PGFGIIS IS K
Sbjct: 232 ITMVLTDRNFNTSFFEVAGGGDPILFQHLFWFFGHPEVYILIIPGFGIISTTISSSSNK 290
Score = 61.7 bits (143), Expect = 2e-08
Identities = 33/67 (49%), Positives = 40/67 (59%), Gaps = 4/67 (5%)
Frame = +1
Query: 256 PRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TV----YPPLSSNIAHRGRSVDLAIFSL 423
PR+NNI F I+E G GTG T+ YPPLS +H G SVDLAIF+L
Sbjct: 124 PRLNNISFWLLPPSLLLLVFSAIIEGGVGTGWTLLKDKYPPLSGLQSHSGPSVDLAIFAL 183
Query: 424 HLAGISS 444
HL+G+SS
Sbjct: 184 HLSGVSS 190
Score = 52.4 bits (120), Expect = 1e-05
Identities = 30/85 (35%), Positives = 39/85 (45%), Gaps = 1/85 (1%)
Frame = +2
Query: 2 TNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPG-SLIGDDQIYNTIVTAHAXXXXXX 178
TN KDIGTLY EL PG I ++Q+YN+I+TAHA
Sbjct: 38 TNAKDIGTLYLIFALFSGLLGTAFSVLIRLELSGPGVQFIANNQLYNSIITAHAILMIFF 97
Query: 179 XXXXXXXXXXXN*LVPLILGAPDIA 253
N L+PL++G PD+A
Sbjct: 98 MVMPALIGGFGNFLMPLMIGGPDMA 122
>UniRef50_Q5W914 Cluster: Cytochrome c oxidase subunit I; n=9;
Coelomata|Rep: Cytochrome c oxidase subunit I - Lingula
unguis
Length = 573
Score = 95.5 bits (227), Expect = 1e-18
Identities = 41/62 (66%), Positives = 50/62 (80%)
Frame = +3
Query: 579 AGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQER 758
A +T+LL DR+ +TSF+ P GGGDPIL+QHLF FFGHPEVYILILP FG+ISHI+ +
Sbjct: 206 AAGLTLLLLDRHFSTSFYYPEGGGDPILWQHLFWFFGHPEVYILILPAFGVISHILCRSS 265
Query: 759 GK 764
K
Sbjct: 266 AK 267
Score = 51.6 bits (118), Expect = 2e-05
Identities = 25/63 (39%), Positives = 35/63 (55%)
Frame = +1
Query: 256 PRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 435
PR+NN+ + G G G T+YPPLS++ G +DLA+FSLH+AG
Sbjct: 97 PRLNNLSVWLALGSLFLMCMAFLSSGGLGCGWTMYPPLSNSEFMDGLPIDLAVFSLHMAG 156
Query: 436 ISS 444
+SS
Sbjct: 157 MSS 159
Score = 37.5 bits (83), Expect = 0.38
Identities = 21/83 (25%), Positives = 33/83 (39%)
Frame = +2
Query: 5 NHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXX 184
NHKDIGT+Y EL +PG + +Y++I+T HA
Sbjct: 13 NHKDIGTIYLYMGLWSGVFGLSLSHCMRIELSHPGEWLQVGYMYHSIMTMHAFMMIFFFV 72
Query: 185 XXXXXXXXXN*LVPLILGAPDIA 253
N +PL++ D++
Sbjct: 73 MPTSIGGLGNWFIPLMIKIKDLS 95
>UniRef50_P14544 Cluster: Cytochrome c oxidase subunit 1; n=7;
Eukaryota|Rep: Cytochrome c oxidase subunit 1 -
Leishmania tarentolae (Sauroleishmania tarentolae)
Length = 549
Score = 94.3 bits (224), Expect = 3e-18
Identities = 43/76 (56%), Positives = 54/76 (71%)
Frame = +3
Query: 519 LFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPE 698
LF+ A ITA AG +T++L DRN NTSF+D GGGD IL+QH+F FFGHPE
Sbjct: 186 LFIWAALITAILLIITLPVLAGGVTLILCDRNFNTSFYDVVGGGDLILFQHIFWFFGHPE 245
Query: 699 VYILILPGFGIISHII 746
VYI++LP FG+IS I+
Sbjct: 246 VYIILLPVFGLISTIV 261
Score = 44.0 bits (99), Expect = 0.004
Identities = 22/63 (34%), Positives = 30/63 (47%)
Frame = +1
Query: 256 PRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 435
PR+NN+ F + E G G G T+YP L H + D +F++HL G
Sbjct: 98 PRLNNMSFWMYLAGFGCVVNGFLTEEGMGVGWTLYPTLICIDFHSSLACDFVMFAVHLLG 157
Query: 436 ISS 444
ISS
Sbjct: 158 ISS 160
>UniRef50_Q02766 Cluster: Cytochrome c oxidase subunit 1; n=107;
Alveolata|Rep: Cytochrome c oxidase subunit 1 -
Plasmodium falciparum
Length = 476
Score = 93.1 bits (221), Expect = 7e-18
Identities = 40/56 (71%), Positives = 46/56 (82%)
Frame = +3
Query: 582 GAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIIS 749
G + +LL+D + NT FFDP GDPILYQHLF FFGHPEVYILILP FG+ISH+IS
Sbjct: 210 GGVLMLLSDLHFNTLFFDPTFAGDPILYQHLFWFFGHPEVYILILPAFGVISHVIS 265
Score = 41.1 bits (92), Expect = 0.031
Identities = 23/64 (35%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
Frame = +1
Query: 256 PRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGR-SVDLAIFSLHLA 432
PRIN+I E G GTG T+YPPLS+++ +VD+ IF L ++
Sbjct: 100 PRINSISLLLQPIAFVLVILSTAAEFGGGTGWTLYPPLSTSLMSLSPVAVDVIIFGLLVS 159
Query: 433 GISS 444
G++S
Sbjct: 160 GVAS 163
>UniRef50_O47573 Cluster: Cytochrome c oxidase subunit I; n=42;
Nematoda|Rep: Cytochrome c oxidase subunit I -
Onchocerca volvulus
Length = 548
Score = 92.7 bits (220), Expect = 9e-18
Identities = 42/79 (53%), Positives = 54/79 (68%)
Frame = +3
Query: 510 QLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFG 689
Q+ +FV +T+F AG++ LL DRN NTSF+D GG+P+LYQHLF FFG
Sbjct: 190 QISMFVWTSYLTSFLLVLSVPVLAGSLLFLLLDRNFNTSFYDTKKGGNPLLYQHLFWFFG 249
Query: 690 HPEVYILILPGFGIISHII 746
HPEVY++ILP FGIIS +
Sbjct: 250 HPEVYVIILPVFGIISEAV 268
Score = 44.0 bits (99), Expect = 0.004
Identities = 25/85 (29%), Positives = 35/85 (41%), Gaps = 2/85 (2%)
Frame = +2
Query: 5 NHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXXXXXX 178
NHK IGT Y EL +PG G Q+YN+++T H
Sbjct: 20 NHKTIGTYYIVLGYWAGLGGSVLSMLIRFELSSPGGHLFFGSGQVYNSVLTMHGVLMIFF 79
Query: 179 XXXXXXXXXXXN*LVPLILGAPDIA 253
N ++PL+LGAP++A
Sbjct: 80 LVMPILIGGFGNWMLPLMLGAPEMA 104
Score = 33.5 bits (73), Expect = 6.1
Identities = 20/63 (31%), Positives = 25/63 (39%)
Frame = +1
Query: 256 PRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 435
PR+N + F + G G+ T YPPLS S+D I LH G
Sbjct: 106 PRVNALSFWFTFVALLMVYQSFFIGGGPGSSWTFYPPLSVE-GQPELSLDTMILGLHTVG 164
Query: 436 ISS 444
I S
Sbjct: 165 IGS 167
>UniRef50_Q85HI4 Cluster: Cytochrome c oxidase subunit I; n=7;
Echinoida|Rep: Cytochrome c oxidase subunit I -
Echinometra oblonga
Length = 386
Score = 91.5 bits (217), Expect = 2e-17
Identities = 39/53 (73%), Positives = 46/53 (86%)
Frame = +3
Query: 612 NLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKK 770
N T+FFDPAGGGD IL+QHLF FFGHPEVYILILPGFG+ISH+I+ GK++
Sbjct: 191 NYYTTFFDPAGGGDXILFQHLFXFFGHPEVYILILPGFGMISHVIAHYSGKRE 243
>UniRef50_Q9MLW1 Cluster: Cytochrome c oxidase subunit I; n=5;
Naupactini|Rep: Cytochrome c oxidase subunit I -
Galapaganus collaris
Length = 406
Score = 90.2 bits (214), Expect = 5e-17
Identities = 43/61 (70%), Positives = 47/61 (77%)
Frame = +3
Query: 510 QLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFG 689
++PLFV AV ITA AGAIT+LLTDRN+NTSFFDPAGGGDPILYQHLF F G
Sbjct: 99 RMPLFVWAVEITAILLLLSLPVLAGAITMLLTDRNINTSFFDPAGGGDPILYQHLFWFXG 158
Query: 690 H 692
H
Sbjct: 159 H 159
Score = 68.5 bits (160), Expect = 2e-10
Identities = 37/63 (58%), Positives = 41/63 (65%)
Frame = +1
Query: 256 PRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 435
PR N+ F VE GAGTG TV PPLS+NIAH G SVDLAIFSLH+AG
Sbjct: 14 PRXINMSFWFLPPXLSFFLXSSXVEKGAGTGWTVSPPLSANIAHEGSSVDLAIFSLHMAG 73
Query: 436 ISS 444
+ S
Sbjct: 74 VXS 76
>UniRef50_A6BM65 Cluster: Cytochrome oxidase subunit I; n=1;
Periclimenes thermohydrophilus|Rep: Cytochrome oxidase
subunit I - Periclimenes thermohydrophilus
Length = 217
Score = 86.2 bits (204), Expect = 8e-16
Identities = 48/93 (51%), Positives = 56/93 (60%)
Frame = -1
Query: 300 KGGG*ESKSYIIYSWDAISGAPSIRGTNQFPNPPXXXXXXXXXXXXKACAVTIVL*I*SS 121
K GG + +A+SGAP++ GTNQFPNPP KA AVT+ L I S
Sbjct: 126 KEGGSNQNLMLFIRGNAMSGAPNMSGTNQFPNPPIMIGMTMKKIITKAWAVTMTL-IWSF 184
Query: 120 PINDPGFPNSARIKSLKDVPIIPDQIPKIKYNV 22
PI PG PNSARIKSL DVP +P PK+KYNV
Sbjct: 185 PIKLPGCPNSARIKSLSDVPTMPAHAPKMKYNV 217
Score = 85.4 bits (202), Expect = 1e-15
Identities = 40/63 (63%), Positives = 47/63 (74%)
Frame = -2
Query: 443 DEIPAKCSEKIARSTDLPLCAILDESGG*TVHPVPAPFSTILLEINNIREGGRSQNLILF 264
+E PAKC+EKI STD P CAI SGG TVHPVP P STI L + ++EGG +QNL+LF
Sbjct: 78 EETPAKCNEKIPMSTDAPACAIPLASGGYTVHPVPTPLSTIPLNKSKVKEGGSNQNLMLF 137
Query: 263 IRG 255
IRG
Sbjct: 138 IRG 140
Score = 77.0 bits (181), Expect = 5e-13
Identities = 37/54 (68%), Positives = 43/54 (79%)
Frame = -3
Query: 676 NKC*YKIGSPPPAGSKNDVFKFRSVNNIVIAPAKTGSDNNNKNAVIPTAHTNKG 515
NKC + IGSPPPAGSK +VFKFRSV +IVIAPA TGS++N+K AV T TN G
Sbjct: 1 NKC-WSIGSPPPAGSKKEVFKFRSVKSIVIAPASTGSESNSKMAVSNTDQTNSG 53
>UniRef50_Q36097 Cluster: Cytochrome c oxidase subunit 1; n=3;
Theileria|Rep: Cytochrome c oxidase subunit 1 -
Theileria parva
Length = 481
Score = 83.8 bits (198), Expect = 4e-15
Identities = 36/73 (49%), Positives = 49/73 (67%)
Frame = +3
Query: 531 AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYIL 710
++ +T+F ++ DR+ NT FF+ + GDP+LYQHLF FFGHPEVYI+
Sbjct: 193 SIVLTSFLLLLSLPVVTAVFLMVFLDRHYNTMFFESSNSGDPVLYQHLFWFFGHPEVYIM 252
Query: 711 ILPGFGIISHIIS 749
ILPGFGIIS ++S
Sbjct: 253 ILPGFGIISLLLS 265
Score = 41.1 bits (92), Expect = 0.031
Identities = 23/63 (36%), Positives = 34/63 (53%)
Frame = +1
Query: 256 PRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 435
PR+N +E G+GTG T+YPPLS+++++ G +D IF L AG
Sbjct: 103 PRVNLYSLLFQPIGFVLVVSSIYLEIGSGTGWTLYPPLSTSLSNVG--IDFIIFGLLAAG 160
Query: 436 ISS 444
I+S
Sbjct: 161 IAS 163
>UniRef50_Q9XKD7 Cluster: Cytochrome c oxidase subunit I; n=1;
Dicyema misakiense|Rep: Cytochrome c oxidase subunit I -
Dicyema misakiense
Length = 473
Score = 82.6 bits (195), Expect = 1e-14
Identities = 38/78 (48%), Positives = 51/78 (65%)
Frame = +3
Query: 513 LPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGH 692
L LF ++ + + A IT++LTD++L T F+D GGDP+LYQHLF FFGH
Sbjct: 165 LSLFCWSIVLVSLLLVLSLPVLAVGITLILTDKHLGTCFYDATMGGDPLLYQHLFWFFGH 224
Query: 693 PEVYILILPGFGIISHII 746
PEVY++ILP FG+ S I
Sbjct: 225 PEVYVVILPVFGLFSSSI 242
Score = 36.7 bits (81), Expect = 0.66
Identities = 20/36 (55%), Positives = 24/36 (66%)
Frame = +1
Query: 337 AGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 444
A G T YPPLSS SV+ ++FSLHLAGI+S
Sbjct: 112 ASAGWTFYPPLSS----LSPSVEFSVFSLHLAGIAS 143
>UniRef50_A2T435 Cluster: Cytochrome c oxidase subunit I; n=126;
Fungi/Metazoa group|Rep: Cytochrome c oxidase subunit I
- Placozoan sp. BZ2423
Length = 498
Score = 82.6 bits (195), Expect = 1e-14
Identities = 40/60 (66%), Positives = 45/60 (75%)
Frame = +3
Query: 510 QLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFG 689
++PLFV +V ITA AGAIT+LLTDR NT+FFDPAGGGDPILYQHLF FFG
Sbjct: 181 RIPLFVWSVLITAILLLLSLPVLAGAITMLLTDRYFNTTFFDPAGGGDPILYQHLFWFFG 240
Score = 73.7 bits (173), Expect = 5e-12
Identities = 37/63 (58%), Positives = 42/63 (66%)
Frame = +1
Query: 256 PRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 435
PR+NNI F +VE GAGTG TVYPPL+S AH G SVD+AIFSLHLAG
Sbjct: 96 PRLNNISFWLLPPALFLLLGSSLVEQGAGTGWTVYPPLASIQAHSGGSVDMAIFSLHLAG 155
Query: 436 ISS 444
+SS
Sbjct: 156 LSS 158
Score = 65.3 bits (152), Expect = 2e-09
Identities = 37/100 (37%), Positives = 46/100 (46%)
Frame = +2
Query: 5 NHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXX 184
NHKDIG+LY EL +PGS++GDD +YN IVTAHA
Sbjct: 12 NHKDIGSLYLVFGALSGAIGTAFSMLIRLELSSPGSMLGDDHLYNVIVTAHAFVMIFFLV 71
Query: 185 XXXXXXXXXN*LVPLILGAPDIASHE*II*DFDSYPPPLY 304
N VPL++GAPD+A F PP L+
Sbjct: 72 MPTMIGGFGNWFVPLMIGAPDMAFPRLNNISFWLLPPALF 111
>UniRef50_Q98P35 Cluster: Cytochrome C oxidase subunit I; n=16;
cellular organisms|Rep: Cytochrome C oxidase subunit I -
Rhizobium loti (Mesorhizobium loti)
Length = 623
Score = 81.8 bits (193), Expect = 2e-14
Identities = 38/80 (47%), Positives = 54/80 (67%)
Frame = +3
Query: 510 QLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFG 689
++PLFV ++ +T+F A T L+ DR + T FF+PA GGD +L+QHLF FFG
Sbjct: 196 RIPLFVWSMLVTSFLVILAMPAIMIASTSLILDRLVGTHFFNPAEGGDVLLWQHLFWFFG 255
Query: 690 HPEVYILILPGFGIISHIIS 749
HPEVYI+ LP G++S I++
Sbjct: 256 HPEVYIIFLPAVGMVSSIVA 275
>UniRef50_Q0H8Y1 Cluster: Probable intron-encoded endonuclease aI5
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI5 (EC
3.1.-.-)]; n=2; Ustilago maydis|Rep: Probable
intron-encoded endonuclease aI5 precursor [Contains:
Truncated non-functional cytochrome oxidase 1;
Intron-encoded endonuclease aI5 (EC 3.1.-.-)] - Ustilago
maydis (Smut fungus)
Length = 536
Score = 81.8 bits (193), Expect = 2e-14
Identities = 38/56 (67%), Positives = 43/56 (76%)
Frame = +3
Query: 510 QLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF 677
+LPLFV A+ +TA AGAIT+LLTDRN NTSF+DPAGGGDPILYQHLF
Sbjct: 180 KLPLFVWAIFVTAILLLLSLPVLAGAITMLLTDRNFNTSFYDPAGGGDPILYQHLF 235
Score = 71.7 bits (168), Expect = 2e-11
Identities = 37/63 (58%), Positives = 40/63 (63%)
Frame = +1
Query: 256 PRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 435
PR+NNI F VE GAGTG TVYPPLS +H G SVDLAIFSLHL+G
Sbjct: 95 PRLNNISFWLLPPSLILLLASAFVEQGAGTGWTVYPPLSGLQSHSGGSVDLAIFSLHLSG 154
Query: 436 ISS 444
ISS
Sbjct: 155 ISS 157
Score = 53.6 bits (123), Expect = 5e-06
Identities = 33/86 (38%), Positives = 39/86 (45%), Gaps = 2/86 (2%)
Frame = +2
Query: 2 TNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXXXXX 175
TN KDIGTLY EL PG L GD Q+YN I+TAHA
Sbjct: 8 TNAKDIGTLYLIFAVFAAMIGTAFSVLIRMELAAPGVQYLNGDHQLYNVIITAHAFVMIF 67
Query: 176 XXXXXXXXXXXXN*LVPLILGAPDIA 253
N LVP+++GAPD+A
Sbjct: 68 FMVMPAMVGGFGNYLVPVMIGAPDMA 93
>UniRef50_A6C5X9 Cluster: Cytochrome caa3 oxidase; n=3;
Bacteria|Rep: Cytochrome caa3 oxidase - Planctomyces
maris DSM 8797
Length = 754
Score = 81.4 bits (192), Expect = 2e-14
Identities = 39/79 (49%), Positives = 51/79 (64%)
Frame = +3
Query: 510 QLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFG 689
++PLFV + + A A+ +LL DR L ++FFDP GG +L+QH F FG
Sbjct: 199 RVPLFVWMMLMQAILIILALPALNSALAMLLIDRWLGSAFFDPTRGGSAVLWQHYFWIFG 258
Query: 690 HPEVYILILPGFGIISHII 746
HPEVYILILPGFG+IS +I
Sbjct: 259 HPEVYILILPGFGMISEVI 277
>UniRef50_Q06473 Cluster: Cytochrome c oxidase subunit 1 (EC
1.9.3.1) (Cytochrome c oxidase polypeptide I)
(Cytochrome aa3 subunit 1) (Oxidase aa(3) subunit 1);
n=59; Cyanobacteria|Rep: Cytochrome c oxidase subunit 1
(EC 1.9.3.1) (Cytochrome c oxidase polypeptide I)
(Cytochrome aa3 subunit 1) (Oxidase aa(3) subunit 1) -
Synechocystis sp. (strain PCC 6803)
Length = 551
Score = 81.4 bits (192), Expect = 2e-14
Identities = 38/78 (48%), Positives = 50/78 (64%)
Frame = +3
Query: 513 LPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGH 692
+PLF A+ T+ A A+ +L D TSFF+P GGGDP++YQHLF F+ H
Sbjct: 192 MPLFCWAMLATSSLILLSTPVLASALILLSFDLIAGTSFFNPVGGGDPVVYQHLFWFYSH 251
Query: 693 PEVYILILPGFGIISHII 746
P VYI+ILP FG+IS +I
Sbjct: 252 PAVYIMILPFFGVISEVI 269
>UniRef50_Q6XYE8 Cluster: Cytochrome c oxidase subunit I; n=2;
Endopterygota|Rep: Cytochrome c oxidase subunit I -
Copitarsia incommoda
Length = 150
Score = 81.0 bits (191), Expect = 3e-14
Identities = 37/52 (71%), Positives = 38/52 (73%)
Frame = +2
Query: 611 KLKYIIF*SCWRRRPNFISTFILIFWTS*SLYFNFTRIWYNFSYYFTRKRKK 766
K KYIIF S W F+STFILIFWT SLYFNFT IWYNFSYYF K KK
Sbjct: 7 KFKYIIFWSSWSSWSYFMSTFILIFWTPSSLYFNFTSIWYNFSYYFPSKSKK 58
>UniRef50_P33518 Cluster: Cytochrome c oxidase polypeptide 1; n=4;
Halobacteriaceae|Rep: Cytochrome c oxidase polypeptide 1
- Halobacterium salinarium (Halobacterium halobium)
Length = 593
Score = 78.6 bits (185), Expect = 2e-13
Identities = 36/61 (59%), Positives = 46/61 (75%)
Frame = +3
Query: 585 AITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGK 764
A+ +LL DRN T+FF AGG DPI +QHLF FFGHPEVY+L+LP GI+S I+ + G+
Sbjct: 260 ALIMLLLDRNFGTTFFTVAGG-DPIFWQHLFWFFGHPEVYVLVLPPMGIVSLILPKFSGR 318
Query: 765 K 767
K
Sbjct: 319 K 319
>UniRef50_Q58PB7 Cluster: Cytochrome c oxidase subunit I; n=106;
Bilateria|Rep: Cytochrome c oxidase subunit I -
Homalopoma maculosa
Length = 219
Score = 78.2 bits (184), Expect = 2e-13
Identities = 38/53 (71%), Positives = 40/53 (75%)
Frame = +3
Query: 519 LFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF 677
LFV +V ITA AGAIT+LLTDRN NTSFFDPAGGGDPILYQHLF
Sbjct: 166 LFVWSVKITAILLLLSLPVLAGAITMLLTDRNFNTSFFDPAGGGDPILYQHLF 218
Score = 77.0 bits (181), Expect = 5e-13
Identities = 38/63 (60%), Positives = 42/63 (66%)
Frame = +1
Query: 256 PRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 435
PR+NN+ F VE+GAGTG TVYPPLS N AH G SVDLAIFSLHLAG
Sbjct: 78 PRLNNMSFWFLPPSLSLLLMSAAVESGAGTGWTVYPPLSGNTAHAGPSVDLAIFSLHLAG 137
Query: 436 ISS 444
+SS
Sbjct: 138 VSS 140
Score = 58.0 bits (134), Expect = 2e-07
Identities = 28/54 (51%), Positives = 33/54 (61%)
Frame = +2
Query: 92 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIA 253
ELG PGS IG+DQ+YN +VTAHA N LVPL+LGAPD+A
Sbjct: 23 ELGQPGSFIGNDQLYNVVVTAHAFVMIFFLVMPMMIGGFGNWLVPLMLGAPDMA 76
>UniRef50_A5UVJ0 Cluster: Cytochrome-c oxidase; n=2;
Roseiflexus|Rep: Cytochrome-c oxidase - Roseiflexus sp.
RS-1
Length = 641
Score = 77.4 bits (182), Expect = 4e-13
Identities = 40/79 (50%), Positives = 48/79 (60%)
Frame = +3
Query: 510 QLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFG 689
++PLFV + AF A LL DR+ T FF P GGD +L+QHLF FFG
Sbjct: 198 RMPLFVWMQLVVAFILIFAFPVLTVATIQLLFDRHFGTRFFLPNLGGDAVLWQHLFWFFG 257
Query: 690 HPEVYILILPGFGIISHII 746
HPEVYILILP GIIS ++
Sbjct: 258 HPEVYILILPTMGIISEVL 276
>UniRef50_P03878 Cluster: Intron-encoded DNA endonuclease aI4
precursor (DNA endonuclease I- SceII) [Contains:
Truncated non-functional cytochrome oxidase 1; DNA
endonuclease aI4 (EC 3.1.-.-) (Intron-encoded
endonuclease I-SceII)]; n=4; Saccharomycetales|Rep:
Intron-encoded DNA endonuclease aI4 precursor (DNA
endonuclease I- SceII) [Contains: Truncated
non-functional cytochrome oxidase 1; DNA endonuclease
aI4 (EC 3.1.-.-) (Intron-encoded endonuclease I-SceII)]
- Saccharomyces cerevisiae (Baker's yeast)
Length = 556
Score = 77.4 bits (182), Expect = 4e-13
Identities = 37/69 (53%), Positives = 47/69 (68%)
Frame = +3
Query: 510 QLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFG 689
+LPLFV ++ ITAF + IT+LL DRN NTSFF+ +GGGDPILY+HLF FFG
Sbjct: 181 KLPLFVWSIFITAFLLLLSLPVLSAGITMLLLDRNFNTSFFEVSGGGDPILYEHLFWFFG 240
Query: 690 HPEVYILIL 716
I++L
Sbjct: 241 QTVATIIML 249
Score = 72.5 bits (170), Expect = 1e-11
Identities = 38/63 (60%), Positives = 41/63 (65%)
Frame = +1
Query: 256 PRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 435
PRINNI F +VE+GAGTG TVYPPLSS AH G SVDLAIF+LHL
Sbjct: 96 PRINNIAFWVLPMGLVCLVTSTLVESGAGTGWTVYPPLSSIQAHSGPSVDLAIFALHLTS 155
Query: 436 ISS 444
ISS
Sbjct: 156 ISS 158
>UniRef50_Q18JR5 Cluster: Cytochrome-c-like terminal oxidase,
subunit I; n=2; Halobacteriaceae|Rep: Cytochrome-c-like
terminal oxidase, subunit I - Haloquadratum walsbyi
(strain DSM 16790)
Length = 634
Score = 76.2 bits (179), Expect = 9e-13
Identities = 37/61 (60%), Positives = 46/61 (75%)
Frame = +3
Query: 585 AITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGK 764
AI +LL DRN TSFF AG G IL+QHLF FFGHPEVYI++LP GIIS+I+ + G+
Sbjct: 292 AIMMLLFDRNFGTSFF--AGEGGAILWQHLFWFFGHPEVYIIVLPPMGIISYILPRFSGR 349
Query: 765 K 767
+
Sbjct: 350 R 350
Score = 39.5 bits (88), Expect = 0.093
Identities = 23/83 (27%), Positives = 35/83 (42%)
Frame = +2
Query: 5 NHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXX 184
+HKDIG LY EL +PG + + YN+++T+H
Sbjct: 93 DHKDIGLLYGAFGLTAFAVGGLMVVLMRIELADPGMTVISNTFYNSLLTSHG-ITMLFLF 151
Query: 185 XXXXXXXXXN*LVPLILGAPDIA 253
N L+PL++GA D+A
Sbjct: 152 ATPIIAAFSNYLIPLLIGADDMA 174
>UniRef50_O67935 Cluster: Cytochrome c oxidase subunit I; n=1;
Aquifex aeolicus|Rep: Cytochrome c oxidase subunit I -
Aquifex aeolicus
Length = 485
Score = 75.8 bits (178), Expect = 1e-12
Identities = 31/56 (55%), Positives = 43/56 (76%)
Frame = +3
Query: 579 AGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHII 746
AGA+T+L D+ L T+FF+PA GGDP++YQ++F F+ HP VY+ +LP FG S II
Sbjct: 159 AGAVTMLFLDKYLGTNFFNPAKGGDPLIYQNIFWFYSHPVVYVQVLPVFGFYSEII 214
>UniRef50_Q1CZF1 Cluster: Cytochrome c oxidase, subunit I; n=1;
Myxococcus xanthus DK 1622|Rep: Cytochrome c oxidase,
subunit I - Myxococcus xanthus (strain DK 1622)
Length = 556
Score = 75.4 bits (177), Expect = 2e-12
Identities = 35/81 (43%), Positives = 52/81 (64%), Gaps = 1/81 (1%)
Frame = +3
Query: 510 QLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNL-NTSFFDPAGGGDPILYQHLF*FF 686
++PLFV A+ T+ G + +L+T NL FDPA GGDP+L+QHLF F+
Sbjct: 206 KMPLFVWAIYATS-CIQVLATPVIGLLLVLVTVENLFGFGMFDPARGGDPVLFQHLFWFY 264
Query: 687 GHPEVYILILPGFGIISHIIS 749
HP VYI++LP FG++S +++
Sbjct: 265 SHPAVYIMVLPSFGVMSEVVA 285
Score = 34.3 bits (75), Expect = 3.5
Identities = 22/83 (26%), Positives = 29/83 (34%)
Frame = +2
Query: 5 NHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXX 184
+HK IG ++ EL PG I D YN T H
Sbjct: 41 DHKRIGLMFLFWVLLFFLVGGIFALLIRVELLTPGPTIMDAMTYNRTFTLHGLVMIFLFM 100
Query: 185 XXXXXXXXXN*LVPLILGAPDIA 253
N ++PL+LGA D+A
Sbjct: 101 IPAIPAVFGNFMLPLMLGAKDVA 123
>UniRef50_A7HEB5 Cluster: Cytochrome-c oxidase; n=2;
Cystobacterineae|Rep: Cytochrome-c oxidase -
Anaeromyxobacter sp. Fw109-5
Length = 596
Score = 74.9 bits (176), Expect = 2e-12
Identities = 38/85 (44%), Positives = 50/85 (58%), Gaps = 5/85 (5%)
Frame = +3
Query: 510 QLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPA-----GGGDPILYQHL 674
+LPL + + +TA A +LL DR+ T FF GGGDPIL+QHL
Sbjct: 213 RLPLTIWGLWLTAILNALFVPVLGSAALLLLLDRSFGTEFFVAGASAVRGGGDPILWQHL 272
Query: 675 F*FFGHPEVYILILPGFGIISHIIS 749
F FGHPEVYI+ILP +GI+ ++S
Sbjct: 273 FWIFGHPEVYIMILPAWGILGDVLS 297
>UniRef50_Q34463 Cluster: Cytochrome oxidase subunit I; n=3; Euglena
gracilis|Rep: Cytochrome oxidase subunit I - Euglena
gracilis
Length = 495
Score = 74.5 bits (175), Expect = 3e-12
Identities = 34/55 (61%), Positives = 44/55 (80%)
Frame = +3
Query: 585 AITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIIS 749
AIT LL DRN+N++ +D G DP+LYQHLF FFGHPEVY++ILP FG+ S I++
Sbjct: 217 AITGLLLDRNINSTIYDVIG--DPVLYQHLFWFFGHPEVYVIILPVFGLTSLILT 269
Score = 35.1 bits (77), Expect = 2.0
Identities = 21/65 (32%), Positives = 33/65 (50%), Gaps = 2/65 (3%)
Frame = +1
Query: 256 PRINNIRFXXXXXXXXXXXXXXIV-ENGAGTG*TVYPPLSSNIAHR-GRSVDLAIFSLHL 429
PR+N I F ++ +G T+YPPLS+ A G ++DL++ +H+
Sbjct: 105 PRMNGISFWMLIVGVVIFVISNVLMSKPISSGWTLYPPLSTRDADNIGVNIDLSLLVVHV 164
Query: 430 AGISS 444
GISS
Sbjct: 165 LGISS 169
>UniRef50_Q0I8U1 Cluster: Cytochrome c oxidase subunit I; n=16;
Bacteria|Rep: Cytochrome c oxidase subunit I -
Synechococcus sp. (strain CC9311)
Length = 564
Score = 74.1 bits (174), Expect = 4e-12
Identities = 33/78 (42%), Positives = 44/78 (56%)
Frame = +3
Query: 510 QLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFG 689
++P+FV G +LL D + TSFF P GGGDP+L+QH F F+
Sbjct: 206 RMPVFVWTAWAAQTIQLIGLPALTGGAVMLLFDLSFGTSFFRPEGGGDPVLFQHFFWFYS 265
Query: 690 HPEVYILILPGFGIISHI 743
HP VY+L+LP FGI S +
Sbjct: 266 HPAVYVLVLPVFGIFSEL 283
>UniRef50_P11947 Cluster: Cytochrome c oxidase subunit 1; n=48;
Oligohymenophorea|Rep: Cytochrome c oxidase subunit 1 -
Tetrahymena pyriformis
Length = 698
Score = 74.1 bits (174), Expect = 4e-12
Identities = 32/61 (52%), Positives = 44/61 (72%)
Frame = +3
Query: 585 AITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGK 764
A+ ++ DR+ T+FF+ A GGDPIL QHLF FFGHPEVY+LI+P FG I+ I+ +
Sbjct: 366 AVIMMAFDRHWQTTFFEYAYGGDPILSQHLFWFFGHPEVYVLIIPTFGFINMIVPHNNTR 425
Query: 765 K 767
+
Sbjct: 426 R 426
>UniRef50_Q8M352 Cluster: I-SceII DNA endonuclease-like protein;
n=1; Saccharomyces castellii|Rep: I-SceII DNA
endonuclease-like protein - Saccharomyces castellii
(Yeast)
Length = 598
Score = 73.7 bits (173), Expect = 5e-12
Identities = 35/60 (58%), Positives = 42/60 (70%)
Frame = +3
Query: 510 QLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFG 689
+LPLFV A+ ITA + +T+LL DRN NTSFF+ AGGGDPILY+HLF FFG
Sbjct: 181 KLPLFVWAILITAVLLLLTLPVLSAGVTMLLLDRNFNTSFFEVAGGGDPILYEHLFWFFG 240
Score = 70.1 bits (164), Expect = 6e-11
Identities = 36/63 (57%), Positives = 41/63 (65%)
Frame = +1
Query: 256 PRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 435
PRINNI F +VE+GAGTG TVYPPL+S AH G SVDLAIF+LH+
Sbjct: 96 PRINNIGFWLLPMGLVCLVTSTLVESGAGTGWTVYPPLASIQAHSGPSVDLAIFALHMTS 155
Query: 436 ISS 444
ISS
Sbjct: 156 ISS 158
>UniRef50_Q8SK39 Cluster: Cytochrome c oxidase subunit I; n=455;
cellular organisms|Rep: Cytochrome c oxidase subunit I -
Pandaka lidwilli
Length = 507
Score = 72.9 bits (171), Expect = 8e-12
Identities = 36/63 (57%), Positives = 41/63 (65%)
Frame = +1
Query: 256 PRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 435
PR+NN+ F +E GAGTG TVYPPL+ N+AH G SVDL IFSLHLAG
Sbjct: 84 PRMNNMSFWLLPPSFLLLLASSGIEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAG 143
Query: 436 ISS 444
ISS
Sbjct: 144 ISS 146
Score = 69.3 bits (162), Expect = 1e-10
Identities = 36/82 (43%), Positives = 42/82 (51%)
Frame = +2
Query: 8 HKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXX 187
HKDIGTLY AEL PG+L+GDDQIYN IVTAHA
Sbjct: 1 HKDIGTLYLIFGAWAGMVGTALSLLIRAELSQPGALLGDDQIYNVIVTAHAFVMIFFMVM 60
Query: 188 XXXXXXXXN*LVPLILGAPDIA 253
N L+PL++GAPD+A
Sbjct: 61 PIMIGGFGNWLIPLMIGAPDMA 82
Score = 49.6 bits (113), Expect = 9e-05
Identities = 26/43 (60%), Positives = 28/43 (65%)
Frame = +3
Query: 510 QLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDP 638
Q PLFV AV ITA A IT+LLTDRNLNT+FFDP
Sbjct: 169 QTPLFVWAVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDP 211
>UniRef50_Q8ZXD1 Cluster: Cytochrome C oxidase subunit I /III; n=4;
cellular organisms|Rep: Cytochrome C oxidase subunit I
/III - Pyrobaculum aerophilum
Length = 800
Score = 72.5 bits (170), Expect = 1e-11
Identities = 35/63 (55%), Positives = 45/63 (71%), Gaps = 5/63 (7%)
Frame = +3
Query: 579 AGAITILLTDRNLNTSFF-----DPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHI 743
AGAI +LL +R+L FF DPA GDP L+QH+F FFGHPEVYIL+LP G++S +
Sbjct: 209 AGAIMLLL-ERHLGMHFFTPVPGDPAASGDPRLFQHIFWFFGHPEVYILVLPAMGLVSEV 267
Query: 744 ISQ 752
I +
Sbjct: 268 IQR 270
>UniRef50_P24010 Cluster: Cytochrome c oxidase subunit 1 (EC
1.9.3.1) (Cytochrome c oxidase polypeptide I)
(Cytochrome aa3 subunit 1) (Caa-3605 subunit 1) (Oxidase
aa(3) subunit 1); n=13; Bacillaceae|Rep: Cytochrome c
oxidase subunit 1 (EC 1.9.3.1) (Cytochrome c oxidase
polypeptide I) (Cytochrome aa3 subunit 1) (Caa-3605
subunit 1) (Oxidase aa(3) subunit 1) - Bacillus subtilis
Length = 622
Score = 72.1 bits (169), Expect = 1e-11
Identities = 32/79 (40%), Positives = 47/79 (59%)
Frame = +3
Query: 510 QLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFG 689
+LPLF + + + +++ DR T+FF+P GG+ ++++HLF FG
Sbjct: 189 RLPLFTWTTFVASALILFAFPPLTVGLALMMLDRLFGTNFFNPELGGNTVIWEHLFWIFG 248
Query: 690 HPEVYILILPGFGIISHII 746
HPEVYILILP FGI S +I
Sbjct: 249 HPEVYILILPAFGIFSEVI 267
>UniRef50_Q0H8Y0 Cluster: Probable intron-encoded endonuclease aI4
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI4 (EC
3.1.-.-)]; n=3; Basidiomycota|Rep: Probable
intron-encoded endonuclease aI4 precursor [Contains:
Truncated non-functional cytochrome oxidase 1;
Intron-encoded endonuclease aI4 (EC 3.1.-.-)] - Ustilago
maydis (Smut fungus)
Length = 530
Score = 71.7 bits (168), Expect = 2e-11
Identities = 37/63 (58%), Positives = 40/63 (63%)
Frame = +1
Query: 256 PRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 435
PR+NNI F VE GAGTG TVYPPLS +H G SVDLAIFSLHL+G
Sbjct: 95 PRLNNISFWLLPPSLILLLASAFVEQGAGTGWTVYPPLSGLQSHSGGSVDLAIFSLHLSG 154
Query: 436 ISS 444
ISS
Sbjct: 155 ISS 157
Score = 53.6 bits (123), Expect = 5e-06
Identities = 33/86 (38%), Positives = 39/86 (45%), Gaps = 2/86 (2%)
Frame = +2
Query: 2 TNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXXXXX 175
TN KDIGTLY EL PG L GD Q+YN I+TAHA
Sbjct: 8 TNAKDIGTLYLIFAVFAAMIGTAFSVLIRMELAAPGVQYLNGDHQLYNVIITAHAFVMIF 67
Query: 176 XXXXXXXXXXXXN*LVPLILGAPDIA 253
N LVP+++GAPD+A
Sbjct: 68 FMVMPAMVGGFGNYLVPVMIGAPDMA 93
>UniRef50_P39481 Cluster: Quinol oxidase subunit 1/3; n=5;
Sulfolobaceae|Rep: Quinol oxidase subunit 1/3 -
Sulfolobus acidocaldarius
Length = 788
Score = 71.3 bits (167), Expect = 3e-11
Identities = 34/79 (43%), Positives = 44/79 (55%)
Frame = +3
Query: 510 QLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFG 689
++PLFV TA + +R T FFD A GG P+L+Q LF FFG
Sbjct: 178 KMPLFVWGFFTTAILMIIAMPSLTAGLVFAYLERLWGTPFFDSALGGSPVLWQQLFWFFG 237
Query: 690 HPEVYILILPGFGIISHII 746
HPEVYILILP G++S ++
Sbjct: 238 HPEVYILILPAMGLVSELL 256
>UniRef50_Q67ML1 Cluster: Cytochrome C oxidase subunit I; n=17;
Bacteria|Rep: Cytochrome C oxidase subunit I -
Symbiobacterium thermophilum
Length = 628
Score = 70.9 bits (166), Expect = 3e-11
Identities = 34/81 (41%), Positives = 47/81 (58%)
Frame = +3
Query: 504 ICQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*F 683
+ ++P+FV +T+ A+ +L+ DR +FF+ GG + YQHLF
Sbjct: 198 LMKMPVFVWTTLVTSAIIIFAFPSVTVALIMLMFDRTFAANFFEVLRGGSVVFYQHLFWT 257
Query: 684 FGHPEVYILILPGFGIISHII 746
FGHPEVYILILP GIIS +I
Sbjct: 258 FGHPEVYILILPAMGIISEVI 278
>UniRef50_Q6ED51 Cluster: Cox-i3 protein; n=1; Candida stellata|Rep:
Cox-i3 protein - Candida stellata (Yeast)
Length = 588
Score = 70.9 bits (166), Expect = 3e-11
Identities = 36/71 (50%), Positives = 47/71 (66%), Gaps = 2/71 (2%)
Frame = +3
Query: 510 QLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFG 689
+LPLFV +V ITA A +T+LL DRN NTSFF +GGGDP+LY+H+F FFG
Sbjct: 198 KLPLFVWSVLITAVLIILALPVLAAGLTMLLMDRNFNTSFFVVSGGGDPLLYEHIFWFFG 257
Query: 690 H--PEVYILIL 716
P + I+I+
Sbjct: 258 QIWPIIIIIII 268
Score = 63.7 bits (148), Expect = 5e-09
Identities = 28/63 (44%), Positives = 41/63 (65%)
Frame = +1
Query: 256 PRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 435
PRINN+ F +++ G G+G T+YPPL+S +H G S+D+AIF+LHL+G
Sbjct: 113 PRINNLAFVVLLPSMLFAVLSCLIDEGPGSGWTLYPPLTSLQSHSGSSIDMAIFALHLSG 172
Query: 436 ISS 444
+SS
Sbjct: 173 LSS 175
>UniRef50_P98000 Cluster: Alternative cytochrome c oxidase subunit 1
(EC 1.9.3.1) (Alternative cytochrome c oxidase
polypeptide I) (Cytochrome BB3 subunit 1) (Oxidase BB(3)
subunit 1); n=25; Bacteria|Rep: Alternative cytochrome c
oxidase subunit 1 (EC 1.9.3.1) (Alternative cytochrome c
oxidase polypeptide I) (Cytochrome BB3 subunit 1)
(Oxidase BB(3) subunit 1) - Bradyrhizobium japonicum
Length = 591
Score = 70.9 bits (166), Expect = 3e-11
Identities = 37/67 (55%), Positives = 43/67 (64%), Gaps = 10/67 (14%)
Frame = +3
Query: 594 ILLTDRNLNTSFFDPA----------GGGDPILYQHLF*FFGHPEVYILILPGFGIISHI 743
+LL DR L TSFF P GGG P+L+QHLF FFGHPEVYI+ LP FGI+S +
Sbjct: 238 MLLLDRLLGTSFFMPTLVEMGQLSKYGGGSPLLFQHLFWFFGHPEVYIVALPAFGIVSDL 297
Query: 744 ISQERGK 764
IS K
Sbjct: 298 ISTHARK 304
>UniRef50_Q1H1C1 Cluster: Cytochrome-c oxidase; n=1; Methylobacillus
flagellatus KT|Rep: Cytochrome-c oxidase -
Methylobacillus flagellatus (strain KT / ATCC 51484 /
DSM 6875)
Length = 631
Score = 70.5 bits (165), Expect = 4e-11
Identities = 36/79 (45%), Positives = 47/79 (59%)
Frame = +3
Query: 510 QLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFG 689
++P+FV AV + +F A +L DR FF A GDPIL+QHLF FFG
Sbjct: 203 RMPIFVWAVLVMSFMIVFALPPLVIASLMLALDRMAGMHFFT-AASGDPILWQHLFWFFG 261
Query: 690 HPEVYILILPGFGIISHII 746
HPEVYI+ +P G++S II
Sbjct: 262 HPEVYIIFIPALGMVSSII 280
>UniRef50_Q9B6E6 Cluster: COX1-i5 protein; n=3; Fungi/Metazoa
group|Rep: COX1-i5 protein - Yarrowia lipolytica
(Candida lipolytica)
Length = 608
Score = 69.3 bits (162), Expect = 1e-10
Identities = 34/68 (50%), Positives = 43/68 (63%)
Frame = +3
Query: 513 LPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGH 692
+PLF AV TA A +T+ + DRN NTSFF+ AGGGD +LYQHLF ++ H
Sbjct: 187 VPLFAWAVLFTAILLLLSLPVLAAGLTMGIFDRNFNTSFFEYAGGGDAVLYQHLFYWWNH 246
Query: 693 PEVYILIL 716
PEV I+ L
Sbjct: 247 PEVKIICL 254
Score = 60.5 bits (140), Expect = 5e-08
Identities = 32/62 (51%), Positives = 38/62 (61%)
Frame = +1
Query: 259 RINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGI 438
R+NNI F +VE GAGTG TVY PL+ +H G +VDLAIFSLHL+G
Sbjct: 102 RLNNISFWLLVPSLILILTSALVEAGAGTGWTVYFPLAGIQSHSGPAVDLAIFSLHLSGF 161
Query: 439 SS 444
SS
Sbjct: 162 SS 163
Score = 44.0 bits (99), Expect = 0.004
Identities = 29/86 (33%), Positives = 36/86 (41%), Gaps = 2/86 (2%)
Frame = +2
Query: 2 TNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXXXXX 175
TN KDI LY EL N GS L G+ Q +N ++TAHA
Sbjct: 14 TNAKDIAVLYFIFALFSAMIGTGLSAIIRLELANTGSPFLHGNTQAFNVVITAHAILMIF 73
Query: 176 XXXXXXXXXXXXN*LVPLILGAPDIA 253
N L+PL+LGA D+A
Sbjct: 74 FFVMPALVGGFGNYLMPLMLGASDMA 99
>UniRef50_Q79VD7 Cluster: Cytochrome c oxidase subunit 1; n=93;
Actinobacteria (class)|Rep: Cytochrome c oxidase subunit
1 - Corynebacterium glutamicum (Brevibacterium flavum)
Length = 584
Score = 68.5 bits (160), Expect = 2e-10
Identities = 34/79 (43%), Positives = 46/79 (58%)
Frame = +3
Query: 510 QLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFG 689
++P+F + + + A +L DR L +DPA GG +L+QHLF FFG
Sbjct: 206 RMPIFTWNIFVVSVLALLIFPLLLAAALGVLYDRKLGGHLYDPANGGS-LLWQHLFWFFG 264
Query: 690 HPEVYILILPGFGIISHII 746
HPEVY+L LP FGI+S II
Sbjct: 265 HPEVYVLALPFFGIVSEII 283
>UniRef50_Q9YDX6 Cluster: Heme-copper oxidase subunit I+III; n=1;
Aeropyrum pernix|Rep: Heme-copper oxidase subunit I+III
- Aeropyrum pernix
Length = 815
Score = 68.5 bits (160), Expect = 2e-10
Identities = 36/86 (41%), Positives = 49/86 (56%), Gaps = 1/86 (1%)
Frame = +3
Query: 510 QLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFF-DPAGGGDPILYQHLF*FF 686
++P+F ++ T +LL DRNL T FF +PAGG +L+ HLF FF
Sbjct: 189 KMPMFTWSILFTVILMLWAFPPLMVGGALLLLDRNLGTEFFLNPAGGA--LLWDHLFWFF 246
Query: 687 GHPEVYILILPGFGIISHIISQERGK 764
GHPEVYIL+ P G ++ +IS GK
Sbjct: 247 GHPEVYILLFPALGAMADVISTFSGK 272
>UniRef50_A7H8L4 Cluster: Cytochrome c oxidase subunit I type; n=38;
Bacteria|Rep: Cytochrome c oxidase subunit I type -
Anaeromyxobacter sp. Fw109-5
Length = 555
Score = 68.1 bits (159), Expect = 2e-10
Identities = 28/79 (35%), Positives = 45/79 (56%)
Frame = +3
Query: 510 QLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFG 689
+LPLFV ++ T+ ++ ++ + FDPA GGDP+L+QH F F+
Sbjct: 199 RLPLFVWSIYATSVIQILATPVLGMSLLLVAVEHAFGWGIFDPARGGDPVLFQHFFWFYS 258
Query: 690 HPEVYILILPGFGIISHII 746
HP VYI++LP +IS ++
Sbjct: 259 HPAVYIMVLPAMAVISEVV 277
Score = 34.3 bits (75), Expect = 3.5
Identities = 21/83 (25%), Positives = 30/83 (36%)
Frame = +2
Query: 5 NHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXX 184
+HK IG ++ EL PG I D YN + T H
Sbjct: 34 DHKRIGVMFLVATTISFALGGFFALLIRLELLTPGPTIMDAMTYNRMFTLHGVVMIFLFM 93
Query: 185 XXXXXXXXXN*LVPLILGAPDIA 253
N L+P+++GA D+A
Sbjct: 94 IPAIPSGFGNFLLPIMIGAKDVA 116
>UniRef50_Q11EK8 Cluster: Cytochrome c oxidase, subunit I; n=5;
Proteobacteria|Rep: Cytochrome c oxidase, subunit I -
Mesorhizobium sp. (strain BNC1)
Length = 845
Score = 67.7 bits (158), Expect = 3e-10
Identities = 33/81 (40%), Positives = 47/81 (58%)
Frame = +3
Query: 504 ICQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*F 683
+ ++P+F A+ I A A +L +R+ FF GGDP+L+QHLF F
Sbjct: 204 LTRMPIFAWAMLIFAAMIMIAFPAVILATMLLEIERSFGWPFFTAERGGDPLLWQHLFWF 263
Query: 684 FGHPEVYILILPGFGIISHII 746
FGHPEVYI+ LP G++S I+
Sbjct: 264 FGHPEVYIIFLPAAGLVSMIV 284
>UniRef50_A1ZL77 Cluster: Alternative Cytochrome c oxidase
polypeptide I (Cytochrome BB3 subunit 1) (Oxidase BB(3)
subunit 1); n=20; cellular organisms|Rep: Alternative
Cytochrome c oxidase polypeptide I (Cytochrome BB3
subunit 1) (Oxidase BB(3) subunit 1) - Microscilla
marina ATCC 23134
Length = 635
Score = 66.9 bits (156), Expect = 5e-10
Identities = 40/95 (42%), Positives = 52/95 (54%), Gaps = 10/95 (10%)
Frame = +3
Query: 510 QLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDP----AG------GGDPI 659
+LPL + A ITA A +L+ DR+L TSFF AG GG P+
Sbjct: 232 RLPLTIWAFFITAIIGLLSFPVLFSAALLLIFDRSLGTSFFLSEIYIAGEALHHQGGSPV 291
Query: 660 LYQHLF*FFGHPEVYILILPGFGIISHIISQERGK 764
L+QHLF F GHPEVYI+++P GI S +I+ K
Sbjct: 292 LFQHLFWFLGHPEVYIVLIPALGITSEVIATNARK 326
>UniRef50_Q3L2S5 Cluster: Cytochrome c oxidase subunit I; n=1; Aedes
cretinus|Rep: Cytochrome c oxidase subunit I - Aedes
cretinus
Length = 153
Score = 66.9 bits (156), Expect = 5e-10
Identities = 33/63 (52%), Positives = 37/63 (58%)
Frame = +2
Query: 503 HLSITLICMSCRDYSXXXXXXTTCFSWSYYNIINRSKLKYIIF*SCWRRRPNFISTFILI 682
+ SIT ICM C +Y TCFS S+Y IIN K KY IF W P +STFILI
Sbjct: 90 NFSITFICMICCNYCYFITSFFTCFSSSHYYIINWPKSKYFIFWPNWSSSPYSLSTFILI 149
Query: 683 FWT 691
FWT
Sbjct: 150 FWT 152
Score = 62.9 bits (146), Expect = 9e-09
Identities = 31/55 (56%), Positives = 35/55 (63%)
Frame = +1
Query: 256 PRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFS 420
PR+NN+ F +VENGAGTG TVYPPLSS AH G SVDLAI+S
Sbjct: 11 PRMNNMSFWMLPPSLTLLLSSSMVENGAGTGWTVYPPLSSGTAHAGASVDLAIYS 65
>UniRef50_A0RZ19 Cluster: Heme/copper-type cytochrome/quinol
oxidase, subunit 1; n=2; Thermoprotei|Rep:
Heme/copper-type cytochrome/quinol oxidase, subunit 1 -
Cenarchaeum symbiosum
Length = 508
Score = 66.5 bits (155), Expect = 7e-10
Identities = 29/56 (51%), Positives = 40/56 (71%)
Frame = +3
Query: 579 AGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHII 746
A A+ +LLTDR + FF+PA GGDPI Y HLF F HPEVY+L++P G++ ++
Sbjct: 205 AAALLMLLTDRLGVSGFFNPAVGGDPIAYAHLFWFTFHPEVYVLVIPAIGMMYEMV 260
>UniRef50_Q951H1 Cluster: Cytochrome c oxidase subunit I; n=388;
Coelomata|Rep: Cytochrome c oxidase subunit I - Picoides
borealis
Length = 513
Score = 66.1 bits (154), Expect = 9e-10
Identities = 39/84 (46%), Positives = 44/84 (52%)
Frame = +2
Query: 2 TNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXX 181
TNHKD GTL AELG PG+L+GDDQ N IVTAHA
Sbjct: 11 TNHKDXGTLXXIFGAWAGMIGTALSLLIRAELGQPGTLLGDDQXXNVIVTAHAFVMIFXM 70
Query: 182 XXXXXXXXXXN*LVPLILGAPDIA 253
N LVPL++GAPD+A
Sbjct: 71 XMPIMIGGFGNWLVPLMIGAPDMA 94
Score = 36.7 bits (81), Expect = 0.66
Identities = 18/39 (46%), Positives = 21/39 (53%)
Frame = +1
Query: 256 PRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLS 372
PR+NN+ F VE GAGTG TVYPPL+
Sbjct: 96 PRMNNMSFWLLPPSFLLLLASSTVEAGAGTGWTVYPPLA 134
>UniRef50_Q7NQZ0 Cluster: Cytochrome o ubiquinol oxidase, subunit I;
n=22; Bacteria|Rep: Cytochrome o ubiquinol oxidase,
subunit I - Chromobacterium violaceum
Length = 680
Score = 66.1 bits (154), Expect = 9e-10
Identities = 30/62 (48%), Positives = 42/62 (67%)
Frame = +3
Query: 582 GAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERG 761
GA+ +L DR L+ FF GG+ ++Y +LF +GHPEVYIL+LP FGI S ++S G
Sbjct: 249 GALAMLALDRYLDFHFFTAELGGNAMMYLNLFWAWGHPEVYILVLPAFGIFSEVVSTFAG 308
Query: 762 KK 767
K+
Sbjct: 309 KR 310
>UniRef50_A3ZTG1 Cluster: Cytochrome c oxidase subunit I; n=1;
Blastopirellula marina DSM 3645|Rep: Cytochrome c
oxidase subunit I - Blastopirellula marina DSM 3645
Length = 595
Score = 66.1 bits (154), Expect = 9e-10
Identities = 37/91 (40%), Positives = 51/91 (56%), Gaps = 11/91 (12%)
Frame = +3
Query: 510 QLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDP-----------AGGGDP 656
+LPL + A+ ITA A ++L DR + T FF P AGGG P
Sbjct: 218 RLPLTIWAMFITALLQAFALPVLTAAGFMMLADRLIGTGFFLPEGLVVNNSPMAAGGGQP 277
Query: 657 ILYQHLF*FFGHPEVYILILPGFGIISHIIS 749
+L+QHLF F+ HP VYI+ILP G++S I++
Sbjct: 278 LLWQHLFWFYSHPAVYIMILPAMGMVSDILA 308
>UniRef50_P98005 Cluster: Cytochrome c oxidase polypeptide I+III (EC
1.9.3.1) (Cytochrome c aa(3) subunit 1); n=2; Thermus
thermophilus|Rep: Cytochrome c oxidase polypeptide I+III
(EC 1.9.3.1) (Cytochrome c aa(3) subunit 1) - Thermus
thermophilus (strain HB8 / ATCC 27634 / DSM 579)
Length = 791
Score = 65.7 bits (153), Expect = 1e-09
Identities = 27/80 (33%), Positives = 48/80 (60%)
Frame = +3
Query: 510 QLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFG 689
++P++V +V + A ++L +R + S+F+PA GGDP+L+Q F F+
Sbjct: 190 KMPIYVWSVFAASVLNLFSLAGLTAATLLVLLERKIGLSWFNPAVGGDPVLFQQFFWFYS 249
Query: 690 HPEVYILILPGFGIISHIIS 749
HP VY+++LP GI++ + S
Sbjct: 250 HPTVYVMLLPYLGILAEVAS 269
>UniRef50_A0TRU9 Cluster: Cytochrome-c oxidase; n=30;
Proteobacteria|Rep: Cytochrome-c oxidase - Burkholderia
cenocepacia MC0-3
Length = 1004
Score = 65.3 bits (152), Expect = 2e-09
Identities = 28/51 (54%), Positives = 35/51 (68%)
Frame = +3
Query: 585 AITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIIS 737
A +L DRN T FFD A GG P+L+QHLF F HP VY+++LP GI+S
Sbjct: 241 AFLLLWLDRNAGTHFFDVAHGGRPLLWQHLFWMFAHPWVYVVVLPAMGIVS 291
>UniRef50_Q5P1W4 Cluster: Cytochrome c oxidase, subunit I; n=13;
Bacteria|Rep: Cytochrome c oxidase, subunit I - Azoarcus
sp. (strain EbN1) (Aromatoleum aromaticum (strain EbN1))
Length = 607
Score = 64.9 bits (151), Expect = 2e-09
Identities = 32/79 (40%), Positives = 46/79 (58%)
Frame = +3
Query: 510 QLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFG 689
++P+F A+ + A A +L +R + FF GGDP+L+QHLF FFG
Sbjct: 265 RMPVFAWAMLVFALMIVFAFPAVILATALLELERAFHWPFFAAHLGGDPLLWQHLFWFFG 324
Query: 690 HPEVYILILPGFGIISHII 746
HPEVYI+ LP G++S I+
Sbjct: 325 HPEVYIIFLPAAGMVSMIV 343
>UniRef50_Q1IUK7 Cluster: Cytochrome-c oxidase; n=2;
Acidobacteria|Rep: Cytochrome-c oxidase - Acidobacteria
bacterium (strain Ellin345)
Length = 595
Score = 64.9 bits (151), Expect = 2e-09
Identities = 38/92 (41%), Positives = 49/92 (53%), Gaps = 11/92 (11%)
Frame = +3
Query: 504 ICQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAG-----------GG 650
+ ++P+ A IT+ A +L DR TSFF P+G GG
Sbjct: 215 LMRMPICTWAWFITSCIALLAFAVLLPACILLCLDRVAGTSFFIPSGLVFNDHVIPHGGG 274
Query: 651 DPILYQHLF*FFGHPEVYILILPGFGIISHII 746
+L+QHLF FFGHPEVYI ILP GI+SHI+
Sbjct: 275 SALLWQHLFWFFGHPEVYIAILPAMGIVSHIL 306
>UniRef50_A0VUI8 Cluster: Cytochrome-c oxidase; n=1; Dinoroseobacter
shibae DFL 12|Rep: Cytochrome-c oxidase -
Dinoroseobacter shibae DFL 12
Length = 853
Score = 63.7 bits (148), Expect = 5e-09
Identities = 32/87 (36%), Positives = 48/87 (55%)
Frame = +3
Query: 504 ICQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*F 683
+ ++P+ + + TAF +L +R L FFD GGDP+L+QHLF
Sbjct: 220 LTKMPILMWYLLATAFMIAIAFPPLIIGSILLEAERLLGLPFFDHTLGGDPLLWQHLFWL 279
Query: 684 FGHPEVYILILPGFGIISHIISQERGK 764
FGHPEVYI+ LP G+++ ++ GK
Sbjct: 280 FGHPEVYIIFLPAAGMVATMLPTFVGK 306
>UniRef50_Q6ED50 Cluster: Cox-i2 protein; n=1; Candida stellata|Rep:
Cox-i2 protein - Candida stellata (Yeast)
Length = 586
Score = 63.7 bits (148), Expect = 5e-09
Identities = 28/63 (44%), Positives = 41/63 (65%)
Frame = +1
Query: 256 PRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 435
PRINN+ F +++ G G+G T+YPPL+S +H G S+D+AIF+LHL+G
Sbjct: 113 PRINNLAFVVLLPSMLFAVLSCLIDEGPGSGWTLYPPLTSLQSHSGSSIDMAIFALHLSG 172
Query: 436 ISS 444
+SS
Sbjct: 173 LSS 175
Score = 63.7 bits (148), Expect = 5e-09
Identities = 37/74 (50%), Positives = 47/74 (63%)
Frame = +3
Query: 510 QLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFG 689
+LPLFV +V ITA A +T+LL DRN NTSFF +GGGDP+LY+H+ F+
Sbjct: 198 KLPLFVWSVLITAVLIILALPVLAAGLTMLLMDRNFNTSFFVVSGGGDPLLYEHI--FYK 255
Query: 690 HPEVYILILPGFGI 731
+P V ILI GI
Sbjct: 256 NP-VLILIWLTSGI 268
>UniRef50_P34956 Cluster: Quinol oxidase subunit 1 (EC 1.10.3.-)
(Quinol oxidase polypeptide I) (Quinol oxidase aa3-600,
subunit qoxB) (Oxidase aa(3)-600 subunit 1); n=45;
Bacillales|Rep: Quinol oxidase subunit 1 (EC 1.10.3.-)
(Quinol oxidase polypeptide I) (Quinol oxidase aa3-600,
subunit qoxB) (Oxidase aa(3)-600 subunit 1) - Bacillus
subtilis
Length = 649
Score = 63.3 bits (147), Expect = 7e-09
Identities = 33/82 (40%), Positives = 44/82 (53%)
Frame = +3
Query: 504 ICQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*F 683
+ ++P+F IT A+ +L DR FF GG P+L+ +LF
Sbjct: 218 LMRMPMFTWTTLITMVIIVFAFPVLTVALALLSFDRLFGAHFFTLEAGGMPMLWANLFWI 277
Query: 684 FGHPEVYILILPGFGIISHIIS 749
+GHPEVYI+ILP FGI S IIS
Sbjct: 278 WGHPEVYIVILPAFGIFSEIIS 299
>UniRef50_Q9WWR2 Cluster: Ubiquinol oxidase subunit 1 (EC 1.10.3.-)
(Ubiquinol oxidase polypeptide I) (Cytochrome o subunit
1) (Oxidase BO(3) subunit 1); n=240; Bacteria|Rep:
Ubiquinol oxidase subunit 1 (EC 1.10.3.-) (Ubiquinol
oxidase polypeptide I) (Cytochrome o subunit 1) (Oxidase
BO(3) subunit 1) - Pseudomonas putida
Length = 672
Score = 63.3 bits (147), Expect = 7e-09
Identities = 29/61 (47%), Positives = 40/61 (65%)
Frame = +3
Query: 585 AITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGK 764
A+ +L DR L+ F GG+P++Y +LF +GHPEVYILILP FG+ S + S GK
Sbjct: 249 ALALLTVDRYLDFHIFTNELGGNPMMYVNLFWAWGHPEVYILILPAFGVFSEVTSTFAGK 308
Query: 765 K 767
+
Sbjct: 309 R 309
>UniRef50_A3SJL2 Cluster: QoxA, Quinol oxidase subunit I; n=2;
Rhodobacteraceae|Rep: QoxA, Quinol oxidase subunit I -
Roseovarius nubinhibens ISM
Length = 818
Score = 61.7 bits (143), Expect = 2e-08
Identities = 31/81 (38%), Positives = 43/81 (53%)
Frame = +3
Query: 504 ICQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*F 683
+ ++P+F +TA +L +R + FF A GGD +L+QHLF
Sbjct: 194 LSKMPIFAWYALVTAVMILTGFPPLILGSILLELERAFDMPFFQAAAGGDALLWQHLFWL 253
Query: 684 FGHPEVYILILPGFGIISHII 746
FGHPEVYI+ LP G IS I+
Sbjct: 254 FGHPEVYIIFLPAAGAISTIL 274
>UniRef50_A7BSH8 Cluster: Cytochrome c oxidase aa3, subunit 1; n=1;
Beggiatoa sp. PS|Rep: Cytochrome c oxidase aa3, subunit
1 - Beggiatoa sp. PS
Length = 525
Score = 61.3 bits (142), Expect = 3e-08
Identities = 31/81 (38%), Positives = 47/81 (58%), Gaps = 1/81 (1%)
Frame = +3
Query: 510 QLPLFV*AVGITAFXXXXXXXXXAG-AITILLTDRNLNTSFFDPAGGGDPILYQHLF*FF 686
+L +FV A + AF G A+T+L D+ + T FFD A GGD + YQ+LF F+
Sbjct: 180 KLNIFVWAT-LAAFVLQLIFVPVLGTAVTMLTFDKYIGTHFFDAAAGGDALTYQNLFWFY 238
Query: 687 GHPEVYILILPGFGIISHIIS 749
HP VY++ LP ++ I++
Sbjct: 239 SHPAVYVIFLPFMAMVFEIVA 259
Score = 34.7 bits (76), Expect = 2.7
Identities = 23/85 (27%), Positives = 31/85 (36%), Gaps = 1/85 (1%)
Frame = +2
Query: 2 TNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDD-QIYNTIVTAHAXXXXXX 178
T+HK +G LY EL G I DD +YNT + H
Sbjct: 12 TDHKRVGILYLIGSIAAFAVAGIMAMLIRLELSQIGPTITDDPSVYNTWLYFHGAAMILA 71
Query: 179 XXXXXXXXXXXN*LVPLILGAPDIA 253
N +PL++GA D+A
Sbjct: 72 FQIPALTGFFANYFIPLMIGAKDVA 96
>UniRef50_A4WT83 Cluster: Cytochrome c, monohaem; n=3;
Rhodobacteraceae|Rep: Cytochrome c, monohaem -
Rhodobacter sphaeroides ATCC 17025
Length = 878
Score = 61.3 bits (142), Expect = 3e-08
Identities = 25/47 (53%), Positives = 33/47 (70%)
Frame = +3
Query: 606 DRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHII 746
+R + FFDP GGDP+L+QHLF FGHPEVYI+ LP + + I+
Sbjct: 254 ERGFDWPFFDPERGGDPLLWQHLFWIFGHPEVYIIFLPLIALAAMIV 300
>UniRef50_Q59IQ0 Cluster: Cytochrome c oxidase subunit I; n=1;
Watasenia scintillans|Rep: Cytochrome c oxidase subunit
I - Watasenia scintillans (Sparkling enope)
Length = 217
Score = 61.3 bits (142), Expect = 3e-08
Identities = 54/181 (29%), Positives = 73/181 (40%), Gaps = 1/181 (0%)
Frame = +2
Query: 92 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIASHE*II 271
ELG PGSL+ DDQ+YN +VTAH N LVPL+LGAPD+A
Sbjct: 24 ELGQPGSLLNDDQLYNVVVTAHGFIMIFFMVMPIMIGGFGNWLVPLMLGAPDMAFPRMNN 83
Query: 272 *DFDSYPPPLYY*FQEEL*KMVQEQDEQFTPHFHLISHIEEDP*ILLFFHYI*QVFHXXX 451
F +P +Y + K +DE TP + + + +F ++ V
Sbjct: 84 MSFGFFPLHWHY-YSFFTVKGGLARDELSTPLYLVTISAGPSVDLAIFPLHLAGVSSILG 142
Query: 452 XXXXXXXXXXXXXXXXYHLSITLICMSCRDYSXXXXXXTTCFSWSYYNIINRS-KLKYII 628
+ + T IC+ Y TC S SYY IIN L YII
Sbjct: 143 SYWLYYNNSLYTVSSSSNGTTTFICLISVYYRYPSTPFFTCTSSSYYYIINSPLLLHYII 202
Query: 629 F 631
+
Sbjct: 203 W 203
Score = 33.1 bits (72), Expect = 8.1
Identities = 15/18 (83%), Positives = 16/18 (88%)
Frame = +1
Query: 391 GRSVDLAIFSLHLAGISS 444
G SVDLAIF LHLAG+SS
Sbjct: 122 GPSVDLAIFPLHLAGVSS 139
>UniRef50_A5FXH8 Cluster: Cytochrome-c oxidase; n=1; Acidiphilium
cryptum JF-5|Rep: Cytochrome-c oxidase - Acidiphilium
cryptum (strain JF-5)
Length = 689
Score = 60.1 bits (139), Expect = 6e-08
Identities = 28/54 (51%), Positives = 36/54 (66%)
Frame = +3
Query: 585 AITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHII 746
A+ +L DR L T FF GG+ +LY +LF +GHPEVY ++LP FG IS II
Sbjct: 268 ALAMLGADRYLGTHFFTAGLGGNLMLYTNLFWIWGHPEVYFVVLPAFGFISEII 321
>UniRef50_A1XI88 Cluster: Cytochrome c oxidase subunit I; n=1;
Myrmarachne sp. G FSC-2006|Rep: Cytochrome c oxidase
subunit I - Myrmarachne sp. G FSC-2006
Length = 129
Score = 59.3 bits (137), Expect = 1e-07
Identities = 28/41 (68%), Positives = 31/41 (75%)
Frame = +1
Query: 322 IVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 444
+VE G G G TVYPPL+S + H G SVD AIFSLHLAG SS
Sbjct: 12 MVEMGVGAGWTVYPPLASVVGHGGSSVDFAIFSLHLAGASS 52
>UniRef50_Q9Z605 Cluster: Quinol oxidase subunit I; n=15;
Proteobacteria|Rep: Quinol oxidase subunit I -
Rhodobacter sphaeroides (Rhodopseudomonas sphaeroides)
Length = 825
Score = 58.8 bits (136), Expect = 1e-07
Identities = 27/51 (52%), Positives = 33/51 (64%)
Frame = +3
Query: 594 ILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHII 746
+L +R FF A GGD +L+QHLF FGHPEVYI+ LP G IS I+
Sbjct: 224 LLELERAFGLPFFQVAEGGDSLLWQHLFWLFGHPEVYIIFLPAAGAISTIL 274
>UniRef50_Q05FH1 Cluster: Cytochrome O ubiquinol oxidase subunit I;
n=1; Candidatus Carsonella ruddii PV|Rep: Cytochrome O
ubiquinol oxidase subunit I - Carsonella ruddii (strain
PV)
Length = 606
Score = 58.8 bits (136), Expect = 1e-07
Identities = 28/51 (54%), Positives = 34/51 (66%)
Frame = +3
Query: 597 LLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIIS 749
+ DR L+T F+ GG +LY +L +GHPEVYILILP FGI S IIS
Sbjct: 248 IFLDRTLSTHFYSSFYGGQQMLYINLIWAWGHPEVYILILPSFGIFSEIIS 298
>UniRef50_Q0AI64 Cluster: Cytochrome-c oxidase; n=3;
Proteobacteria|Rep: Cytochrome-c oxidase - Nitrosomonas
eutropha (strain C71)
Length = 703
Score = 58.0 bits (134), Expect = 2e-07
Identities = 33/84 (39%), Positives = 41/84 (48%)
Frame = +3
Query: 513 LPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGH 692
+PLF TA L DR L+ FF GG+ + + ++F FGH
Sbjct: 245 MPLFTWTALCTAIMMIFAMPPLTVVTLQLALDRYLDFHFFTNGLGGNQMNFLNMFWLFGH 304
Query: 693 PEVYILILPGFGIISHIISQERGK 764
PEVYILILP FG+ S I S GK
Sbjct: 305 PEVYILILPAFGVYSEIFSTFSGK 328
>UniRef50_O99652 Cluster: Cytochrome c oxidase subunit I; n=1;
Tetragona dorsalis ziegleri|Rep: Cytochrome c oxidase
subunit I - Tetragona dorsalis ziegleri
Length = 111
Score = 56.0 bits (129), Expect = 1e-06
Identities = 30/69 (43%), Positives = 39/69 (56%)
Frame = +3
Query: 510 QLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFG 689
Q+ LF ++ IT AG IT+LL+DRN N FF GG PIL+Q++ FG
Sbjct: 13 QINLFSWSISITVNLSILSLPMLAGTITMLLSDRNFNKFFFILIGGEYPILHQYMLWLFG 72
Query: 690 HPEVYILIL 716
H +V LIL
Sbjct: 73 HTDVLFLIL 81
>UniRef50_P29649 Cluster: Cytochrome c oxidase subunit 1; n=441;
Bilateria|Rep: Cytochrome c oxidase subunit 1 - Pantodon
buchholtzi (Butterflyfish)
Length = 184
Score = 55.6 bits (128), Expect = 1e-06
Identities = 23/30 (76%), Positives = 27/30 (90%)
Frame = +3
Query: 681 FFGHPEVYILILPGFGIISHIISQERGKKK 770
FFGHPEVYILILPGFG+ISHI++ GKK+
Sbjct: 2 FFGHPEVYILILPGFGMISHIVAYYSGKKE 31
>UniRef50_Q35061 Cluster: CoxI intron4 ORF; n=3; Marchantia
polymorpha|Rep: CoxI intron4 ORF - Marchantia polymorpha
(Liverwort)
Length = 434
Score = 55.2 bits (127), Expect = 2e-06
Identities = 30/86 (34%), Positives = 40/86 (46%), Gaps = 2/86 (2%)
Frame = +2
Query: 2 TNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLI--GDDQIYNTIVTAHAXXXXX 175
TNHKDIGTLY EL PG+ I G+ Q+YN ++TAHA
Sbjct: 12 TNHKDIGTLYLIFGAIAGVMGTCFSVLIRMELAQPGNQILGGNHQLYNVLITAHAFLMIF 71
Query: 176 XXXXXXXXXXXXN*LVPLILGAPDIA 253
N VP+++G+PD+A
Sbjct: 72 FMVMPAMIGGFGNWFVPILIGSPDMA 97
>UniRef50_Q9RR77 Cluster: Cytochrome c oxidase, subunit I; n=2;
Deinococcus|Rep: Cytochrome c oxidase, subunit I -
Deinococcus radiodurans
Length = 820
Score = 54.8 bits (126), Expect = 2e-06
Identities = 25/80 (31%), Positives = 41/80 (51%)
Frame = +3
Query: 510 QLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFG 689
++P+F ++ T+ A + + L S F+P GG P+LYQ F F+
Sbjct: 198 KMPVFAWSIFATSILQLLTLGGLTAAALLTYLEIKLGLSMFNPGIGGVPVLYQQFFWFYS 257
Query: 690 HPEVYILILPGFGIISHIIS 749
HP VY+++LP GI + + S
Sbjct: 258 HPAVYVMLLPYLGIGAEVAS 277
>UniRef50_A6C0L1 Cluster: Cytochrome c oxidase subunit I; n=1;
Planctomyces maris DSM 8797|Rep: Cytochrome c oxidase
subunit I - Planctomyces maris DSM 8797
Length = 606
Score = 54.8 bits (126), Expect = 2e-06
Identities = 31/91 (34%), Positives = 47/91 (51%), Gaps = 11/91 (12%)
Frame = +3
Query: 510 QLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAG-----------GGDP 656
+LP+ + + ITA + + DR T FF P+G GG P
Sbjct: 221 RLPMTIWGLFITAILQAFALPVLTAGGFMQVADRLFGTCFFYPSGLVINNAAPTVGGGQP 280
Query: 657 ILYQHLF*FFGHPEVYILILPGFGIISHIIS 749
+L+QHLF F+ HP VYI++LP G++S ++S
Sbjct: 281 LLWQHLFWFYSHPAVYIMLLPIMGMVSDMLS 311
>UniRef50_Q6KZG3 Cluster: Cytochrome c oxidase polypeptide I/III;
n=2; Thermoplasmatales|Rep: Cytochrome c oxidase
polypeptide I/III - Picrophilus torridus
Length = 841
Score = 54.8 bits (126), Expect = 2e-06
Identities = 31/86 (36%), Positives = 47/86 (54%)
Frame = +3
Query: 492 K*YIICQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQH 671
K Y + LPLFV AV A G +LL ++ S++ GG +++++
Sbjct: 204 KGYRMMNLPLFVWAVFWVAAISWFVFPEITGLFFLLLVGNLMHASYYISNYGG-ALMWEN 262
Query: 672 LF*FFGHPEVYILILPGFGIISHIIS 749
LF +FGHPEVY+L+LPG G + +S
Sbjct: 263 LFWYFGHPEVYLLLLPGTGAMFDYLS 288
>UniRef50_Q0H8X8 Cluster: Probable intron-encoded endonuclease aI2
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI2 (EC
3.1.-.-)]; n=2; Ustilago maydis|Rep: Probable
intron-encoded endonuclease aI2 precursor [Contains:
Truncated non-functional cytochrome oxidase 1;
Intron-encoded endonuclease aI2 (EC 3.1.-.-)] - Ustilago
maydis (Smut fungus)
Length = 533
Score = 53.6 bits (123), Expect = 5e-06
Identities = 33/86 (38%), Positives = 39/86 (45%), Gaps = 2/86 (2%)
Frame = +2
Query: 2 TNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXXXXX 175
TN KDIGTLY EL PG L GD Q+YN I+TAHA
Sbjct: 8 TNAKDIGTLYLIFAVFAAMIGTAFSVLIRMELAAPGVQYLNGDHQLYNVIITAHAFVMIF 67
Query: 176 XXXXXXXXXXXXN*LVPLILGAPDIA 253
N LVP+++GAPD+A
Sbjct: 68 FMVMPAMVGGFGNYLVPVMIGAPDMA 93
>UniRef50_Q8HCX2 Cluster: Cytochrome c oxidase subunit I; n=1;
Aplidium nordmanni|Rep: Cytochrome c oxidase subunit I -
Aplidium nordmanni
Length = 227
Score = 52.8 bits (121), Expect = 9e-06
Identities = 29/63 (46%), Positives = 34/63 (53%)
Frame = +1
Query: 256 PRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 435
PR+ N+ F + G G VYPP SS +AH +VDL IF LHLAG
Sbjct: 85 PRLXNMSFWLLPPSLXXLCLSVFIGXGVGXXWXVYPPXSSGLAHSSGAVDLGIFXLHLAG 144
Query: 436 ISS 444
ISS
Sbjct: 145 ISS 147
>UniRef50_Q5V018 Cluster: Cytochrome c oxidase subunit I; n=3;
Halobacteriaceae|Rep: Cytochrome c oxidase subunit I -
Haloarcula marismortui (Halobacterium marismortui)
Length = 854
Score = 51.6 bits (118), Expect = 2e-05
Identities = 28/96 (29%), Positives = 46/96 (47%), Gaps = 11/96 (11%)
Frame = +3
Query: 513 LPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFF-----------DPAGGGDPI 659
+P+F ++ +T + A+ IL +D L T++F D G +
Sbjct: 192 IPIFSLSINLTVWMMLFAFAALLAALMILASDHILGTTYFQYSIDGTTMATDADNPGASL 251
Query: 660 LYQHLF*FFGHPEVYILILPGFGIISHIISQERGKK 767
L+ HLF FFGHPEVYI+ P G+++ G++
Sbjct: 252 LWAHLFWFFGHPEVYIVFFPALGVMAECFQTFTGRR 287
>UniRef50_Q6TP93 Cluster: Cytochrome c oxidase subunit I; n=2;
Bruchidius|Rep: Cytochrome c oxidase subunit I -
Bruchidius aff. varius GLK-2003
Length = 339
Score = 49.2 bits (112), Expect = 1e-04
Identities = 22/25 (88%), Positives = 24/25 (96%)
Frame = +3
Query: 696 EVYILILPGFGIISHIISQERGKKK 770
EVYILILPGFG+ISHIISQE GKK+
Sbjct: 155 EVYILILPGFGMISHIISQESGKKE 179
>UniRef50_Q6RJT8 Cluster: Cytochrome c oxidase subunit 2; n=1;
Harmonia axyridis|Rep: Cytochrome c oxidase subunit 2 -
Harmonia axyridis (Multicolored Asian lady beetle)
Length = 193
Score = 49.2 bits (112), Expect = 1e-04
Identities = 19/33 (57%), Positives = 24/33 (72%)
Frame = +2
Query: 668 TFILIFWTS*SLYFNFTRIWYNFSYYFTRKRKK 766
+ ++IFW+S SLYFN IWYNF YY+T K K
Sbjct: 2 SLVMIFWSSSSLYFNSPSIWYNFPYYYTSKSGK 34
>UniRef50_Q7YI87 Cluster: Cytochrome oxidase subunit I; n=1;
Celatoblatta vulgaris|Rep: Cytochrome oxidase subunit I
- Celatoblatta vulgaris
Length = 134
Score = 48.0 bits (109), Expect = 3e-04
Identities = 25/51 (49%), Positives = 29/51 (56%)
Frame = +2
Query: 527 MSCRDYSXXXXXXTTCFSWSYYNIINRSKLKYIIF*SCWRRRPNFISTFIL 679
M C +YS +TC WSYYN IN SKLKYI+F F+ST IL
Sbjct: 84 MICSNYSFTIIIVSTCSCWSYYNTINWSKLKYILFWPSSSWGSYFMSTPIL 134
>UniRef50_A6XEV4 Cluster: Cytochrome c oxidase subunit 1; n=1;
Munidopsis verrucosus|Rep: Cytochrome c oxidase subunit
1 - Munidopsis verrucosus
Length = 154
Score = 47.6 bits (108), Expect = 4e-04
Identities = 21/27 (77%), Positives = 25/27 (92%)
Frame = +1
Query: 364 PLSSNIAHRGRSVDLAIFSLHLAGISS 444
PL+S+IAH G SVD+AIFSLHLAG+SS
Sbjct: 72 PLASSIAHAGASVDMAIFSLHLAGVSS 98
>UniRef50_Q9TCV5 Cluster: Cytochrome c oxidase subunit I; n=6;
Digenea|Rep: Cytochrome c oxidase subunit I -
Echinostoma hortense
Length = 154
Score = 45.6 bits (103), Expect = 0.001
Identities = 18/21 (85%), Positives = 20/21 (95%)
Frame = +3
Query: 681 FFGHPEVYILILPGFGIISHI 743
FFGHPEVY+LILP FGI+SHI
Sbjct: 1 FFGHPEVYVLILPVFGIVSHI 21
>UniRef50_Q9B6E4 Cluster: COX1-i3 protein; n=2; Yarrowia
lipolytica|Rep: COX1-i3 protein - Yarrowia lipolytica
(Candida lipolytica)
Length = 457
Score = 44.0 bits (99), Expect = 0.004
Identities = 29/86 (33%), Positives = 36/86 (41%), Gaps = 2/86 (2%)
Frame = +2
Query: 2 TNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXXXXX 175
TN KDI LY EL N GS L G+ Q +N ++TAHA
Sbjct: 14 TNAKDIAVLYFIFALFSAMIGTGLSAIIRLELANTGSPFLHGNTQAFNVVITAHAILMIF 73
Query: 176 XXXXXXXXXXXXN*LVPLILGAPDIA 253
N L+PL+LGA D+A
Sbjct: 74 FFVMPALVGGFGNYLMPLMLGASDMA 99
>UniRef50_Q94WV3 Cluster: Cytochrome oxidase subunit I; n=1;
Pachymerium ferrugineum|Rep: Cytochrome oxidase subunit
I - Pachymerium ferrugineum
Length = 219
Score = 39.1 bits (87), Expect = 0.12
Identities = 23/57 (40%), Positives = 27/57 (47%)
Frame = +3
Query: 255 PTNK*YKILTPTPLPYIINFKKNCRKWCRNRMNSLPPTFI*YRT*RKIRRSCYFFTT 425
P NK +KIL TPL Y N C K C + +NSLP Y T R +F T
Sbjct: 79 PPNKQFKILIITPLTYTTNSIYGCSKRCSHSVNSLPAPCCKYLTLGPFRSYNHFCPT 135
>UniRef50_O86945 Cluster: Sub-unit I of an aa3-type cytochrome
oxidase; n=1; Acidithiobacillus ferrooxidans|Rep:
Sub-unit I of an aa3-type cytochrome oxidase -
Thiobacillus ferrooxidans (Acidithiobacillus
ferrooxidans)
Length = 627
Score = 36.7 bits (81), Expect = 0.66
Identities = 18/41 (43%), Positives = 21/41 (51%)
Frame = +3
Query: 624 SFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHII 746
S F G P+ Y F F HPEVY+ ILP F I I+
Sbjct: 311 SHFYTGPTGHPLAYLDQFWFLFHPEVYVFILPAFAIWLEIL 351
>UniRef50_A5URU0 Cluster: Cytochrome c oxidase, subunit I; n=4;
Chloroflexaceae|Rep: Cytochrome c oxidase, subunit I -
Roseiflexus sp. RS-1
Length = 561
Score = 35.5 bits (78), Expect = 1.5
Identities = 16/39 (41%), Positives = 23/39 (58%)
Frame = +3
Query: 645 GGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERG 761
G DP+L + LF F GHP VY +LP + + + Q+ G
Sbjct: 224 GTDPVLARTLFWFTGHPIVYFWLLPAYISWYNFVPQQAG 262
>UniRef50_Q9B9T9 Cluster: Cytochrome oxidase subunit 1; n=7;
Locustacarus buchneri|Rep: Cytochrome oxidase subunit 1
- Locustacarus buchneri
Length = 185
Score = 35.5 bits (78), Expect = 1.5
Identities = 26/70 (37%), Positives = 33/70 (47%)
Frame = +2
Query: 515 TLICMSCRDYSXXXXXXTTCFSWSYYNIINRSKLKYIIF*SCWRRRPNFISTFILIFWTS 694
T I M +Y+ TT S S +N N SKL++I+ S PN I ILI T
Sbjct: 86 TSILMKNPNYNNTTDYFTTSSSRSNHNTTNSSKLQHILLRSFGGSGPNPIPASILILRTP 145
Query: 695 *SLYFNFTRI 724
L+ N T I
Sbjct: 146 SGLHSNSTSI 155
>UniRef50_Q2Y5N3 Cluster: Integral membrane proteins containing
uncharacterized repeats-like precursor; n=3;
Nitrosospira multiformis ATCC 25196|Rep: Integral
membrane proteins containing uncharacterized
repeats-like precursor - Nitrosospira multiformis
(strain ATCC 25196 / NCIMB 11849)
Length = 433
Score = 34.7 bits (76), Expect = 2.7
Identities = 13/25 (52%), Positives = 18/25 (72%)
Frame = +3
Query: 693 PEVYILILPGFGIISHIISQERGKK 767
PE+Y LILPG G++ I Q++ KK
Sbjct: 407 PEIYALILPGLGLVGFIARQKKAKK 431
>UniRef50_O67937 Cluster: Cytochrome c oxidase subunit I; n=1;
Aquifex aeolicus|Rep: Cytochrome c oxidase subunit I -
Aquifex aeolicus
Length = 592
Score = 34.7 bits (76), Expect = 2.7
Identities = 18/41 (43%), Positives = 25/41 (60%), Gaps = 3/41 (7%)
Frame = +3
Query: 651 DPILYQHLF*FFGHPEVYILILPGFGIISHI---ISQERGK 764
+P+L + LF FFGHP VY +LP + + I I E+GK
Sbjct: 209 NPLLARTLFWFFGHPVVYFWLLPAYVALYTILPKIVSEKGK 249
>UniRef50_Q2ABI9 Cluster: NADH-ubiquinone oxidoreductase chain 2;
n=21; Neocoleoidea|Rep: NADH-ubiquinone oxidoreductase
chain 2 - Sepia officinalis (Common cuttlefish)
Length = 375
Score = 34.3 bits (75), Expect = 3.5
Identities = 15/28 (53%), Positives = 19/28 (67%)
Frame = +1
Query: 4 KS*RYWNIIFYFWYLIRNNWNIFKTFNS 87
KS YWNI+F+FWYLI ++ K NS
Sbjct: 344 KSQSYWNIMFHFWYLISFISHLAKINNS 371
>UniRef50_Q35062 Cluster: CoxI intron2 ORF; n=2; Marchantia
polymorpha|Rep: CoxI intron2 ORF - Marchantia polymorpha
(Liverwort)
Length = 802
Score = 33.9 bits (74), Expect = 4.6
Identities = 19/48 (39%), Positives = 22/48 (45%), Gaps = 2/48 (4%)
Frame = +2
Query: 2 TNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLI--GDDQIYN 139
TNHKDIGTLY EL PG+ I G+ Q+YN
Sbjct: 12 TNHKDIGTLYLIFGAIAGVMGTCFSVLIRMELAQPGNQILGGNHQLYN 59
>UniRef50_P98004 Cluster: Quinol oxidase subunit 1 (EC 1.10.3.-)
(Quinol oxidase polypeptide I) (Cytochrome aa3 subunit
1) (Oxidase aa(3) subunit 1); n=5; Sulfolobaceae|Rep:
Quinol oxidase subunit 1 (EC 1.10.3.-) (Quinol oxidase
polypeptide I) (Cytochrome aa3 subunit 1) (Oxidase aa(3)
subunit 1) - Sulfolobus acidocaldarius
Length = 517
Score = 33.9 bits (74), Expect = 4.6
Identities = 15/36 (41%), Positives = 22/36 (61%)
Frame = +3
Query: 657 ILYQHLF*FFGHPEVYILILPGFGIISHIISQERGK 764
+L+ LF F+GHP VY + P FG + + I Q G+
Sbjct: 224 LLWAILFWFYGHPVVYYVPFPLFGALYYYIPQYAGR 259
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 627,683,177
Number of Sequences: 1657284
Number of extensions: 11420790
Number of successful extensions: 24324
Number of sequences better than 10.0: 109
Number of HSP's better than 10.0 without gapping: 23107
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24232
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 66673674990
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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