Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV120342.Seq
(686 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_O10372 Cluster: Occlusion-derived virus envelope protei... 99 5e-20
UniRef50_Q462F3 Cluster: Orf13; n=14; Nucleopolyhedrovirus|Rep: ... 83 6e-15
UniRef50_Q0ILA6 Cluster: Odv-e27; n=2; Nucleopolyhedrovirus|Rep:... 57 5e-07
UniRef50_O10370 Cluster: Uncharacterized 55.8 kDa protein; n=13;... 52 1e-05
UniRef50_P41701 Cluster: Occlusion-derived virus envelope protei... 52 1e-05
UniRef50_Q8QL68 Cluster: ODV-E18; n=9; Nucleopolyhedrovirus|Rep:... 43 0.008
UniRef50_Q9YMV5 Cluster: LdOrf-odv-e18 peptide; n=5; Nucleopolyh... 41 0.025
UniRef50_Q1HH82 Cluster: Odv-e18; n=1; Antheraea pernyi nucleopo... 38 0.30
UniRef50_O10371 Cluster: Occlusion-derived virus envelope protei... 37 0.40
UniRef50_UPI0000E497F7 Cluster: PREDICTED: hypothetical protein;... 34 3.7
UniRef50_Q0N488 Cluster: P49; n=15; Nucleopolyhedrovirus|Rep: P4... 33 4.9
UniRef50_Q10426 Cluster: Silencing protein rik1; n=1; Schizosacc... 33 6.5
UniRef50_A5K6G8 Cluster: DEAD/DEAH box helicase, putative; n=2; ... 33 8.6
>UniRef50_O10372 Cluster: Occlusion-derived virus envelope protein
E27; n=12; Nucleopolyhedrovirus|Rep: Occlusion-derived
virus envelope protein E27 - Orgyia pseudotsugata
multicapsid polyhedrosis virus (OpMNPV)
Length = 297
Score = 99 bits (238), Expect = 5e-20
Identities = 47/67 (70%), Positives = 56/67 (83%)
Frame = +3
Query: 486 KNLRIGRIDLKNLSSLESYETLKIKLALSKYMAMLSTLEMTQPLLEIFRNKADTRQIAAV 665
K + DLKNLSSLES+E K+KLALSKYMAM++TLEMTQPLLE+FRN+ADTRQI AV
Sbjct: 24 KTYDLNEFDLKNLSSLESFENTKVKLALSKYMAMINTLEMTQPLLEVFRNRADTRQIVAV 83
Query: 666 VFSTLAF 686
V +T+ F
Sbjct: 84 VQATMGF 90
Score = 46.4 bits (105), Expect = 7e-04
Identities = 20/30 (66%), Positives = 26/30 (86%)
Frame = +1
Query: 418 MKRVKCNKVRTVTEIVNSDEKIQKTYELAE 507
MKRV+CNKVRTVTE+ ++ KI+KTY+L E
Sbjct: 1 MKRVRCNKVRTVTEVKPNNAKIRKTYDLNE 30
>UniRef50_Q462F3 Cluster: Orf13; n=14; Nucleopolyhedrovirus|Rep:
Orf13 - Trichoplusia ni SNPV
Length = 296
Score = 83.0 bits (196), Expect = 6e-15
Identities = 39/67 (58%), Positives = 52/67 (77%)
Frame = +3
Query: 486 KNLRIGRIDLKNLSSLESYETLKIKLALSKYMAMLSTLEMTQPLLEIFRNKADTRQIAAV 665
K + D+KNL+SLESY+TLKIKL + KYMAML+TL++TQPLL IFR++ TR+I V
Sbjct: 27 KEYDLTEFDVKNLNSLESYDTLKIKLVIVKYMAMLNTLQLTQPLLTIFRDRNATREIVTV 86
Query: 666 VFSTLAF 686
V ++L F
Sbjct: 87 VLASLGF 93
Score = 46.4 bits (105), Expect = 7e-04
Identities = 22/33 (66%), Positives = 26/33 (78%), Gaps = 3/33 (9%)
Frame = +1
Query: 418 MKRVKCN---KVRTVTEIVNSDEKIQKTYELAE 507
MKR KC KVRTVTEI+NSD+K+QK Y+L E
Sbjct: 1 MKRFKCQSTPKVRTVTEIINSDDKLQKEYDLTE 33
>UniRef50_Q0ILA6 Cluster: Odv-e27; n=2; Nucleopolyhedrovirus|Rep:
Odv-e27 - Leucania separata nuclear polyhedrosis virus
(LsNPV)
Length = 284
Score = 56.8 bits (131), Expect = 5e-07
Identities = 26/67 (38%), Positives = 43/67 (64%)
Frame = +3
Query: 486 KNLRIGRIDLKNLSSLESYETLKIKLALSKYMAMLSTLEMTQPLLEIFRNKADTRQIAAV 665
K + ++ KNL+SL SY+ ++ L+KY+AML LE +Q L+ FR++ R+I +
Sbjct: 22 KEFELDELNDKNLNSLVSYDNFNTRMVLAKYIAMLHMLETSQSLIATFRDRNAAREIVQI 81
Query: 666 VFSTLAF 686
V ++LAF
Sbjct: 82 VHNSLAF 88
Score = 37.5 bits (83), Expect = 0.30
Identities = 17/25 (68%), Positives = 20/25 (80%)
Frame = +1
Query: 436 NKVRTVTEIVNSDEKIQKTYELAEL 510
NKVRTVTEIVN +K+ K +EL EL
Sbjct: 5 NKVRTVTEIVNGHDKLTKEFELDEL 29
>UniRef50_O10370 Cluster: Uncharacterized 55.8 kDa protein; n=13;
Nucleopolyhedrovirus|Rep: Uncharacterized 55.8 kDa
protein - Orgyia pseudotsugata multicapsid polyhedrosis
virus (OpMNPV)
Length = 484
Score = 52.4 bits (120), Expect = 1e-05
Identities = 24/27 (88%), Positives = 26/27 (96%)
Frame = +2
Query: 2 ESSSELKSLRDLNPWVQNTLLKLLIPD 82
ES+SELKSLRDLNPWVQNTLL+LLI D
Sbjct: 445 ESTSELKSLRDLNPWVQNTLLELLIVD 471
>UniRef50_P41701 Cluster: Occlusion-derived virus envelope protein
E18; n=7; Nucleopolyhedrovirus|Rep: Occlusion-derived
virus envelope protein E18 - Autographa californica
nuclear polyhedrosis virus (AcMNPV)
Length = 62
Score = 52.0 bits (119), Expect = 1e-05
Identities = 22/23 (95%), Positives = 23/23 (100%)
Frame = +2
Query: 332 FMNPLNATMRANPFMNTPQRQML 400
F+NPLNATMRANPFMNTPQRQML
Sbjct: 40 FVNPLNATMRANPFMNTPQRQML 62
>UniRef50_Q8QL68 Cluster: ODV-E18; n=9; Nucleopolyhedrovirus|Rep:
ODV-E18 - Mamestra configurata NPV-A
Length = 83
Score = 42.7 bits (96), Expect = 0.008
Identities = 18/23 (78%), Positives = 20/23 (86%)
Frame = +2
Query: 332 FMNPLNATMRANPFMNTPQRQML 400
F+NPLNATMRANPF+N QR ML
Sbjct: 61 FVNPLNATMRANPFVNPAQRNML 83
>UniRef50_Q9YMV5 Cluster: LdOrf-odv-e18 peptide; n=5;
Nucleopolyhedrovirus|Rep: LdOrf-odv-e18 peptide -
Lymantria dispar multicapsid nuclear polyhedrosis virus
(LdMNPV)
Length = 88
Score = 41.1 bits (92), Expect = 0.025
Identities = 17/23 (73%), Positives = 19/23 (82%)
Frame = +2
Query: 332 FMNPLNATMRANPFMNTPQRQML 400
+ NPLNATMRANPF+N QR ML
Sbjct: 66 YTNPLNATMRANPFVNNAQRSML 88
>UniRef50_Q1HH82 Cluster: Odv-e18; n=1; Antheraea pernyi
nucleopolyhedrovirus|Rep: Odv-e18 - Antheraea pernyi
nuclear polyhedrosis virus (ApNPV)
Length = 68
Score = 37.5 bits (83), Expect = 0.30
Identities = 20/52 (38%), Positives = 24/52 (46%)
Frame = +3
Query: 99 MIYXXXXXXXXXXXDVQSANYLNRLTPNMFLTXXXXXXXXXXXXMFVQSNSN 254
MIY D S NYLN+LTPN FL +F+QS+SN
Sbjct: 1 MIYTDPTTGATTNTDATSNNYLNKLTPNTFLIILAVVVIIALIVIFMQSSSN 52
>UniRef50_O10371 Cluster: Occlusion-derived virus envelope protein
E18; n=7; Nucleopolyhedrovirus|Rep: Occlusion-derived
virus envelope protein E18 - Orgyia pseudotsugata
multicapsid polyhedrosis virus (OpMNPV)
Length = 85
Score = 37.1 bits (82), Expect = 0.40
Identities = 20/52 (38%), Positives = 23/52 (44%)
Frame = +3
Query: 99 MIYXXXXXXXXXXXDVQSANYLNRLTPNMFLTXXXXXXXXXXXXMFVQSNSN 254
MIY D NYLNRLTPN FL +F+QS+SN
Sbjct: 1 MIYTDPATGATTNTDAAGNNYLNRLTPNTFLIILAVVVIVALIIIFMQSSSN 52
Score = 34.7 bits (76), Expect = 2.1
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = +2
Query: 341 PLNATMRANPFMNTPQR 391
PLN TMRANPF+ TPQR
Sbjct: 68 PLNTTMRANPFVATPQR 84
>UniRef50_UPI0000E497F7 Cluster: PREDICTED: hypothetical protein;
n=1; Strongylocentrotus purpuratus|Rep: PREDICTED:
hypothetical protein - Strongylocentrotus purpuratus
Length = 421
Score = 33.9 bits (74), Expect = 3.7
Identities = 23/89 (25%), Positives = 40/89 (44%)
Frame = +3
Query: 417 NETCQMQQSSNGHRNCKQR*KDPKNLRIGRIDLKNLSSLESYETLKIKLALSKYMAMLST 596
+ T Q +NG+ + D KN++ G +KNL L+ + I +L +Y L +
Sbjct: 217 DRTVMQQLIANGYSHVPVYKDDRKNIQ-GAFVVKNLIILDPDDNESISTSLEQYGRPLHS 275
Query: 597 LEMTQPLLEIFRNKADTRQIAAVVFSTLA 683
+ T+PL I D + A ++ A
Sbjct: 276 IAATKPLYNILDEMMDGKYRMAAIYDNPA 304
>UniRef50_Q0N488 Cluster: P49; n=15; Nucleopolyhedrovirus|Rep: P49 -
Clanis bilineata nucleopolyhedrosis virus
Length = 498
Score = 33.5 bits (73), Expect = 4.9
Identities = 17/23 (73%), Positives = 18/23 (78%), Gaps = 1/23 (4%)
Frame = +2
Query: 11 SELKSLRDL-NPWVQNTLLKLLI 76
S KSL +L N WVQNTLLKLLI
Sbjct: 447 SSFKSLHELKNSWVQNTLLKLLI 469
>UniRef50_Q10426 Cluster: Silencing protein rik1; n=1;
Schizosaccharomyces pombe|Rep: Silencing protein rik1 -
Schizosaccharomyces pombe (Fission yeast)
Length = 1040
Score = 33.1 bits (72), Expect = 6.5
Identities = 23/57 (40%), Positives = 30/57 (52%), Gaps = 1/57 (1%)
Frame = -3
Query: 546 FHSFLNCLDFLNQFGQFVGFLDLFIAVYNFGDRSNF-VAFDTFHFYTLIYNICL*GV 379
F S ++CLDF QF VGF + + F D S+ AF T + +L NI L GV
Sbjct: 504 FESEISCLDFSAQFQIGVGFWSKQVMILTFSDNSSISCAFQT-NVPSLPRNIILEGV 559
>UniRef50_A5K6G8 Cluster: DEAD/DEAH box helicase, putative; n=2;
Plasmodium|Rep: DEAD/DEAH box helicase, putative -
Plasmodium vivax
Length = 1393
Score = 32.7 bits (71), Expect = 8.6
Identities = 16/57 (28%), Positives = 32/57 (56%), Gaps = 1/57 (1%)
Frame = +3
Query: 501 GRID-LKNLSSLESYETLKIKLALSKYMAMLSTLEMTQPLLEIFRNKADTRQIAAVV 668
GR+D L++ S ++ L +K ++ Y+ + + +TQ + E N + +IAAV+
Sbjct: 1202 GRLDVLRHFSFIDDEHNLTVKGKIASYITLTDEITLTQVIFENLLNNLNPPEIAAVL 1258
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 562,564,443
Number of Sequences: 1657284
Number of extensions: 9418128
Number of successful extensions: 21361
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 20740
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21353
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 53719013270
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -