Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120341.Seq
         (772 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    23   2.7  
EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine hydroxy...    22   4.7  
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    22   6.2  
AJ307577-1|CAC84070.1|  301|Tribolium castaneum dachshund protein.     22   6.2  
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    21   8.2  
AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    21   8.2  
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    21   8.2  

>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 23.0 bits (47), Expect = 2.7
 Identities = 13/39 (33%), Positives = 20/39 (51%)
 Frame = +1

Query: 472 LVERNEKLYGRGLLMIKDLYLVGCTPSMPIRALVLSCLS 588
           + ++  KLYG  LL+    YL+     M   A++ SC S
Sbjct: 224 MCKKINKLYGHQLLLTILTYLIWTIYEMYHLAILWSCTS 262


>EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine
           hydroxylase protein.
          Length = 532

 Score = 22.2 bits (45), Expect = 4.7
 Identities = 6/17 (35%), Positives = 15/17 (88%)
 Frame = -1

Query: 472 VQKVQSPIHQISKQVVH 422
           V+K+++ +HQ++ +V+H
Sbjct: 502 VEKLETLVHQLNTEVLH 518


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 21.8 bits (44), Expect = 6.2
 Identities = 12/43 (27%), Positives = 21/43 (48%)
 Frame = -1

Query: 442 ISKQVVHPNDHRYKLYFFLDHYPIRLLKLAAVERLCHLLFESQ 314
           I+KQ++      Y+LY +     I +L+       C L++E Q
Sbjct: 534 ITKQLIFMIFVTYQLYCWSSFLKISVLQSLWASPTCDLMYEFQ 576


>AJ307577-1|CAC84070.1|  301|Tribolium castaneum dachshund protein.
          Length = 301

 Score = 21.8 bits (44), Expect = 6.2
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = -3

Query: 671 PQVSICPLISCQAFGTRF 618
           P V+ C L+SC+ F T +
Sbjct: 11  PGVNRCKLLSCKDFDTLY 28


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 21.4 bits (43), Expect = 8.2
 Identities = 7/10 (70%), Positives = 8/10 (80%)
 Frame = +1

Query: 100 TSFCKNGNGK 129
           T FC+NGN K
Sbjct: 695 TCFCENGNNK 704


>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 21.4 bits (43), Expect = 8.2
 Identities = 7/15 (46%), Positives = 11/15 (73%)
 Frame = -3

Query: 692 SQHYQRIPQVSICPL 648
           SQ+Y  +P V+ CP+
Sbjct: 209 SQYYDGVPFVTQCPI 223


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 21.4 bits (43), Expect = 8.2
 Identities = 7/15 (46%), Positives = 11/15 (73%)
 Frame = -3

Query: 692 SQHYQRIPQVSICPL 648
           SQ+Y  +P V+ CP+
Sbjct: 209 SQYYDGVPFVTQCPI 223


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 196,885
Number of Sequences: 336
Number of extensions: 4598
Number of successful extensions: 11
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20753800
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)